RNA–Protein interactions for RNA: ENST00000555832.1

XRCC3-214, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-214ENST00000555832 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
XRCC3-214ENST00000555832 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
XRCC3-214ENST00000555832 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
XRCC3-214ENST00000555832 A0A0U1RRA0 63 aa10.62□□□□□ -0.71
XRCC3-214ENST00000555832 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
XRCC3-214ENST00000555832 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
XRCC3-214ENST00000555832 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
XRCC3-214ENST00000555832 KRTAP7-1Q8IUC3 87 aa10.61□□□□□ -0.71
XRCC3-214ENST00000555832 DIRC1Q969H9 104 aa10.61□□□□□ -0.71
XRCC3-214ENST00000555832 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
XRCC3-214ENST00000555832 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
XRCC3-214ENST00000555832 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
XRCC3-214ENST00000555832 HNRNPA3P51991 378 aaKnown RBP10.59□□□□□ -0.71
XRCC3-214ENST00000555832 SNRPEP62304 92 aaKnown RBP10.59□□□□□ -0.71
XRCC3-214ENST00000555832 S100A12P80511 92 aa10.59□□□□□ -0.71
XRCC3-214ENST00000555832 LINC00167Q96N53 147 aa10.59□□□□□ -0.71
XRCC3-214ENST00000555832 BOD1L2Q8IYS8 172 aa10.58□□□□□ -0.72
XRCC3-214ENST00000555832 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
XRCC3-214ENST00000555832 GAGE10A6NGK3 116 aa10.57□□□□□ -0.72
XRCC3-214ENST00000555832 VPREB1P12018 145 aa10.57□□□□□ -0.72
XRCC3-214ENST00000555832 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
XRCC3-214ENST00000555832 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
XRCC3-214ENST00000555832 RPL28P46779 137 aaKnown RBP10.56□□□□□ -0.72
XRCC3-214ENST00000555832 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
XRCC3-214ENST00000555832 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
XRCC3-214ENST00000555832 RPL37AP8A6NKH3 93 aa10.55□□□□□ -0.72
XRCC3-214ENST00000555832 HSBP1L1C9JCN9 74 aa10.55□□□□□ -0.72
XRCC3-214ENST00000555832 M0R378 163 aa10.55□□□□□ -0.72
XRCC3-214ENST00000555832 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
XRCC3-214ENST00000555832 BCE1O60756 84 aa10.54□□□□□ -0.72
XRCC3-214ENST00000555832 DNAH8Q96JB1 4490 aa10.54□□□□□ -0.72
XRCC3-214ENST00000555832 IGKV2-28A0A075B6P5 120 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 ZNF861PO60384 105 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 TIMM17BO60830 172 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 IGKV2D-28P01615 120 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 UBE2AP49459 152 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 COPS9Q8WXC6 57 aa10.52□□□□□ -0.73
XRCC3-214ENST00000555832 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 SCGB1D4Q6XE38 83 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 CBY1Q9Y3M2 126 aa10.51□□□□□ -0.73
XRCC3-214ENST00000555832 H0Y9J4 135 aa10.5□□□□□ -0.73
XRCC3-214ENST00000555832 LINC01600Q96MT4 127 aa10.5□□□□□ -0.73
XRCC3-214ENST00000555832 FAT1Q14517 4588 aa10.49□□□□□ -0.73
XRCC3-214ENST00000555832 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
XRCC3-214ENST00000555832 TMEM238C9JI98 176 aa10.48□□□□□ -0.73
XRCC3-214ENST00000555832 NDUFC2O95298 119 aa10.48□□□□□ -0.73
XRCC3-214ENST00000555832 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
XRCC3-214ENST00000555832 DAND5Q8N907 189 aa10.48□□□□□ -0.73
XRCC3-214ENST00000555832 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
XRCC3-214ENST00000555832 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
XRCC3-214ENST00000555832 C5orf52A6NGY3 159 aa10.47□□□□□ -0.73
XRCC3-214ENST00000555832 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
XRCC3-214ENST00000555832 PCLOQ9Y6V0 5065 aa10.46□□□□□ -0.73
XRCC3-214ENST00000555832 NCR3O14931 201 aa10.46□□□□□ -0.73
XRCC3-214ENST00000555832 SCGB1D1O95968 90 aa10.46□□□□□ -0.73
XRCC3-214ENST00000555832 S100A7L2Q5SY68 101 aa10.46□□□□□ -0.73
XRCC3-214ENST00000555832 PRYO14603 147 aa10.45□□□□□ -0.74
XRCC3-214ENST00000555832 Q6ZVH6 145 aa10.45□□□□□ -0.74
XRCC3-214ENST00000555832 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
XRCC3-214ENST00000555832 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
XRCC3-214ENST00000555832 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
XRCC3-214ENST00000555832 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
XRCC3-214ENST00000555832 DDTP30046 118 aa10.42□□□□□ -0.74
XRCC3-214ENST00000555832 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
XRCC3-214ENST00000555832 LINC00518Q8N0U6 118 aa10.42□□□□□ -0.74
XRCC3-214ENST00000555832 Q8NDZ9 215 aa10.42□□□□□ -0.74
XRCC3-214ENST00000555832 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
XRCC3-214ENST00000555832 KCNQ1DNQ9H478 68 aa10.42□□□□□ -0.74
XRCC3-214ENST00000555832 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
XRCC3-214ENST00000555832 IFITM1P13164 125 aa10.41□□□□□ -0.74
XRCC3-214ENST00000555832 NPC2P61916 151 aa10.41□□□□□ -0.74
XRCC3-214ENST00000555832 ADAMTSL4-AS1Q5T5F5 129 aa10.41□□□□□ -0.74
XRCC3-214ENST00000555832 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
XRCC3-214ENST00000555832 TRBV10-3A0A0K0K1G6 114 aa10.4□□□□□ -0.74
XRCC3-214ENST00000555832 HINT1P49773 126 aaPredicted RBP10.4□□□□□ -0.74
XRCC3-214ENST00000555832 LINC00337Q8N6G1 96 aa10.39□□□□□ -0.75
XRCC3-214ENST00000555832 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
XRCC3-214ENST00000555832 TTTY13Q9BZ97 58 aa10.39□□□□□ -0.75
XRCC3-214ENST00000555832 LITAFQ99732 161 aa10.38□□□□□ -0.75
XRCC3-214ENST00000555832 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
XRCC3-214ENST00000555832 PRLHP81277 87 aa10.37□□□□□ -0.75
XRCC3-214ENST00000555832 OR13C6PQ8NH95 151 aa10.37□□□□□ -0.75
XRCC3-214ENST00000555832 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
XRCC3-214ENST00000555832 JOSD1Q15040 202 aaPredicted RBP10.36□□□□□ -0.75
XRCC3-214ENST00000555832 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
XRCC3-214ENST00000555832 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
XRCC3-214ENST00000555832 SOSTDC1Q6X4U4 206 aa10.35□□□□□ -0.75
XRCC3-214ENST00000555832 KRTAP13-1Q8IUC0 172 aa10.35□□□□□ -0.75
XRCC3-214ENST00000555832 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
XRCC3-214ENST00000555832 TRAV23DV6A0A075B6W5 121 aa10.34□□□□□ -0.75
XRCC3-214ENST00000555832 IGLV6-57P01721 117 aa10.34□□□□□ -0.75
XRCC3-214ENST00000555832 SPRR1AP35321 89 aa10.34□□□□□ -0.75
XRCC3-214ENST00000555832 KRTAP10-8P60410 259 aa10.34□□□□□ -0.75
XRCC3-214ENST00000555832 CRYGAP11844 174 aa10.33□□□□□ -0.76
XRCC3-214ENST00000555832 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
XRCC3-214ENST00000555832 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms