RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 LINC00575Q6W349 94 aa11□□□□□ -0.65
TUBB3-209ENST00000555609 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
TUBB3-209ENST00000555609 ATRQ13535 2644 aa10.98□□□□□ -0.65
TUBB3-209ENST00000555609 CRYGAP11844 174 aa10.98□□□□□ -0.65
TUBB3-209ENST00000555609 C6orf99Q4VX62 202 aa10.98□□□□□ -0.65
TUBB3-209ENST00000555609 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
TUBB3-209ENST00000555609 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
TUBB3-209ENST00000555609 RPS28P62857 69 aaKnown RBP10.97□□□□□ -0.65
TUBB3-209ENST00000555609 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
TUBB3-209ENST00000555609 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
TUBB3-209ENST00000555609 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.65
TUBB3-209ENST00000555609 LYPD5Q6UWN5 251 aa10.96□□□□□ -0.65
TUBB3-209ENST00000555609 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 DEFB4AO15263 64 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 J3KT08 172 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 WIPF1O43516 503 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 UNQ6190/PRO20217Q6UXQ8 127 aa10.95□□□□□ -0.66
TUBB3-209ENST00000555609 ZNF561-AS1K7EIQ3 104 aa10.94□□□□□ -0.66
TUBB3-209ENST00000555609 GHRHP01286 108 aa10.94□□□□□ -0.66
TUBB3-209ENST00000555609 Q8N3U1 123 aa10.94□□□□□ -0.66
TUBB3-209ENST00000555609 LOC110117498A0A087WWA1 95 aa10.93□□□□□ -0.66
TUBB3-209ENST00000555609 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
TUBB3-209ENST00000555609 PDE6GP18545 87 aa10.93□□□□□ -0.66
TUBB3-209ENST00000555609 C10orf25Q5T742 122 aa10.93□□□□□ -0.66
TUBB3-209ENST00000555609 H3BNG1 76 aa10.92□□□□□ -0.66
TUBB3-209ENST00000555609 C6orf223Q8N319 242 aa10.92□□□□□ -0.66
TUBB3-209ENST00000555609 SERP2Q8N6R1 65 aa10.92□□□□□ -0.66
TUBB3-209ENST00000555609 Q8NDZ9 215 aa10.92□□□□□ -0.66
TUBB3-209ENST00000555609 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
TUBB3-209ENST00000555609 RBM3P98179 157 aaKnown RBP10.91□□□□□ -0.66
TUBB3-209ENST00000555609 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
TUBB3-209ENST00000555609 KLK12Q9UKR0 248 aa10.91□□□□□ -0.66
TUBB3-209ENST00000555609 FBN1P35555 2871 aaKnown RBP10.91□□□□□ -0.66
TUBB3-209ENST00000555609 ENHOQ6UWT2 76 aa10.91□□□□□ -0.66
TUBB3-209ENST00000555609 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
TUBB3-209ENST00000555609 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
TUBB3-209ENST00000555609 Q6ZQT0 140 aa10.89□□□□□ -0.67
TUBB3-209ENST00000555609 HTN3P15516 51 aa10.88□□□□□ -0.67
TUBB3-209ENST00000555609 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
TUBB3-209ENST00000555609 BCE1O60756 84 aa10.87□□□□□ -0.67
TUBB3-209ENST00000555609 DIRC1Q969H9 104 aa10.87□□□□□ -0.67
TUBB3-209ENST00000555609 C6orf48Q9UBA6 75 aa10.87□□□□□ -0.67
TUBB3-209ENST00000555609 TRAV23DV6A0A075B6W5 121 aa10.86□□□□□ -0.67
TUBB3-209ENST00000555609 F8WDY8 70 aa10.86□□□□□ -0.67
TUBB3-209ENST00000555609 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
TUBB3-209ENST00000555609 LAMTOR3Q9UHA4 124 aa10.85□□□□□ -0.67
TUBB3-209ENST00000555609 A0A087WVE0 104 aa10.84□□□□□ -0.67
TUBB3-209ENST00000555609 EGFEM1PQ0D2K5 195 aa10.84□□□□□ -0.67
TUBB3-209ENST00000555609 C3orf56Q8N813 242 aa10.84□□□□□ -0.67
TUBB3-209ENST00000555609 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
TUBB3-209ENST00000555609 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
TUBB3-209ENST00000555609 COX7BP24311 80 aa10.82□□□□□ -0.68
TUBB3-209ENST00000555609 TMEM258P61165 79 aa10.82□□□□□ -0.68
TUBB3-209ENST00000555609 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
TUBB3-209ENST00000555609 ZNF73O43830 326 aaPredicted RBP10.81□□□□□ -0.68
TUBB3-209ENST00000555609 Q6ZQY7 126 aa10.81□□□□□ -0.68
TUBB3-209ENST00000555609 M0R378 163 aa10.81□□□□□ -0.68
TUBB3-209ENST00000555609 ELOF1P60002 83 aaKnown RBP10.81□□□□□ -0.68
TUBB3-209ENST00000555609 KRTAP24-1Q3LI83 254 aa10.81□□□□□ -0.68
TUBB3-209ENST00000555609 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
TUBB3-209ENST00000555609 KRTAP26-1Q6PEX3 210 aa10.8□□□□□ -0.68
TUBB3-209ENST00000555609 CAMK2N2Q96S95 79 aa10.8□□□□□ -0.68
TUBB3-209ENST00000555609 VPREB1P12018 145 aa10.78□□□□□ -0.68
TUBB3-209ENST00000555609 KPRPQ5T749 579 aaPredicted RBP10.78□□□□□ -0.68
TUBB3-209ENST00000555609 MDFIQ99750 246 aa10.78□□□□□ -0.68
TUBB3-209ENST00000555609 CXCL6P80162 114 aa10.77□□□□□ -0.69
TUBB3-209ENST00000555609 DNHD1Q96M86 4753 aa10.77□□□□□ -0.69
TUBB3-209ENST00000555609 XAGE1AQ9HD64 81 aa10.76□□□□□ -0.69
TUBB3-209ENST00000555609 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
TUBB3-209ENST00000555609 NDUFC2-KCTD14E9PQ53 114 aa10.76□□□□□ -0.69
TUBB3-209ENST00000555609 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
TUBB3-209ENST00000555609 Q6ZVQ6 151 aa10.74□□□□□ -0.69
TUBB3-209ENST00000555609 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
TUBB3-209ENST00000555609 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
TUBB3-209ENST00000555609 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
TUBB3-209ENST00000555609 Q6ZRU5 148 aa10.72□□□□□ -0.69
TUBB3-209ENST00000555609 C15orf56Q8N910 161 aa10.72□□□□□ -0.69
TUBB3-209ENST00000555609 HIGD2BQ4VC39 106 aa10.72□□□□□ -0.69
TUBB3-209ENST00000555609 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
TUBB3-209ENST00000555609 ANK2Q01484 3957 aa10.71□□□□□ -0.69
TUBB3-209ENST00000555609 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
TUBB3-209ENST00000555609 C1orf43Q9BWL3 253 aa10.71□□□□□ -0.69
TUBB3-209ENST00000555609 TRAV7A0A075B6U4 112 aa10.7□□□□□ -0.7
TUBB3-209ENST00000555609 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
TUBB3-209ENST00000555609 HAMPP81172 84 aa10.69□□□□□ -0.7
TUBB3-209ENST00000555609 ESRGQ1W209 222 aa10.69□□□□□ -0.7
TUBB3-209ENST00000555609 Q6ZTC4 211 aa10.68□□□□□ -0.7
TUBB3-209ENST00000555609 M0R2N4 97 aa10.68□□□□□ -0.7
TUBB3-209ENST00000555609 CYSTM1Q9H1C7 97 aa10.68□□□□□ -0.7
TUBB3-209ENST00000555609 SYCNQ0VAF6 134 aa10.66□□□□□ -0.7
TUBB3-209ENST00000555609 MRAPQ8TCY5 172 aa10.66□□□□□ -0.7
TUBB3-209ENST00000555609 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
TUBB3-209ENST00000555609 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
TUBB3-209ENST00000555609 NBEAL2Q6ZNJ1 2754 aa10.65□□□□□ -0.7
TUBB3-209ENST00000555609 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
TUBB3-209ENST00000555609 PLA2G2DQ9UNK4 145 aa10.65□□□□□ -0.7
TUBB3-209ENST00000555609 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
TUBB3-209ENST00000555609 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms