RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
SRP54-206ENST00000555317 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 HERV-K104P63124 156 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 DIRC1Q969H9 104 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 SND1-IT1Q9HBX3 110 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
SRP54-206ENST00000555317 LINC00587B1AMM8 73 aa7.43□□□□□ -1.22
SRP54-206ENST00000555317 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
SRP54-206ENST00000555317 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRP54-206ENST00000555317 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
SRP54-206ENST00000555317 GAGE10A6NGK3 116 aa7.42□□□□□ -1.22
SRP54-206ENST00000555317 LEPROTO15243 131 aa7.42□□□□□ -1.22
SRP54-206ENST00000555317 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
SRP54-206ENST00000555317 IGLV5-37A0A075B6J1 123 aa7.41□□□□□ -1.22
SRP54-206ENST00000555317 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
SRP54-206ENST00000555317 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
SRP54-206ENST00000555317 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
SRP54-206ENST00000555317 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
SRP54-206ENST00000555317 J3QQQ9 107 aa7.4□□□□□ -1.22
SRP54-206ENST00000555317 SMIM13P0DJ93 91 aa7.4□□□□□ -1.22
SRP54-206ENST00000555317 LINC01600Q96MT4 127 aa7.4□□□□□ -1.22
SRP54-206ENST00000555317 H0Y9J4 135 aa7.39□□□□□ -1.23
SRP54-206ENST00000555317 NMUP48645 174 aa7.39□□□□□ -1.23
SRP54-206ENST00000555317 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
SRP54-206ENST00000555317 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 BCE1O60756 84 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 VPREB1P12018 145 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 KRTDAPP60985 99 aa7.38□□□□□ -1.23
SRP54-206ENST00000555317 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
SRP54-206ENST00000555317 C20orf202A1L168 122 aa7.37□□□□□ -1.23
SRP54-206ENST00000555317 RPL28P46779 137 aaKnown RBP7.37□□□□□ -1.23
SRP54-206ENST00000555317 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
SRP54-206ENST00000555317 ZNF861PO60384 105 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 UBE2AP49459 152 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
SRP54-206ENST00000555317 E9PLD3 99 aa7.35□□□□□ -1.23
SRP54-206ENST00000555317 C3orf79P0CE67 100 aa7.35□□□□□ -1.23
SRP54-206ENST00000555317 M0R378 163 aa7.34□□□□□ -1.23
SRP54-206ENST00000555317 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
SRP54-206ENST00000555317 S100A6P06703 90 aa7.33□□□□□ -1.24
SRP54-206ENST00000555317 S100A2P29034 98 aa7.33□□□□□ -1.24
SRP54-206ENST00000555317 AKR1D1P51857 326 aa7.33□□□□□ -1.24
SRP54-206ENST00000555317 DAND5Q8N907 189 aa7.33□□□□□ -1.24
SRP54-206ENST00000555317 NCR3O14931 201 aa7.32□□□□□ -1.24
SRP54-206ENST00000555317 S100A12P80511 92 aa7.32□□□□□ -1.24
SRP54-206ENST00000555317 Q8NDZ9 215 aa7.32□□□□□ -1.24
SRP54-206ENST00000555317 TNXBP22105 4242 aa7.32□□□□□ -1.24
SRP54-206ENST00000555317 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
SRP54-206ENST00000555317 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
SRP54-206ENST00000555317 FAM19A1Q7Z5A9 133 aa7.31□□□□□ -1.24
SRP54-206ENST00000555317 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
SRP54-206ENST00000555317 A0A0J9YXY3 114 aa7.3□□□□□ -1.24
SRP54-206ENST00000555317 ZNF815PA8K554 130 aa7.3□□□□□ -1.24
SRP54-206ENST00000555317 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
SRP54-206ENST00000555317 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
SRP54-206ENST00000555317 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
SRP54-206ENST00000555317 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
SRP54-206ENST00000555317 PRYO14603 147 aa7.28□□□□□ -1.24
SRP54-206ENST00000555317 PRLHP81277 87 aa7.28□□□□□ -1.24
SRP54-206ENST00000555317 HIST3H2BBQ8N257 126 aa7.28□□□□□ -1.24
SRP54-206ENST00000555317 SPANXB1Q9NS25 103 aaPredicted RBP7.28□□□□□ -1.24
SRP54-206ENST00000555317 LOC107984156A0A0G2JMH3 177 aa7.27□□□□□ -1.25
SRP54-206ENST00000555317 NPC2P61916 151 aa7.27□□□□□ -1.25
SRP54-206ENST00000555317 ARL17AQ8IVW1 177 aa7.27□□□□□ -1.25
SRP54-206ENST00000555317 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
SRP54-206ENST00000555317 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 TRBV10-2A0A0K0K1G8 114 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 ETDCA0A1B0GVM5 59 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 TIMM17BO60830 172 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 SCGB1D4Q6XE38 83 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 KRTAP13-1Q8IUC0 172 aa7.26□□□□□ -1.25
SRP54-206ENST00000555317 NDUFC2O95298 119 aa7.25□□□□□ -1.25
SRP54-206ENST00000555317 DDTP30046 118 aa7.25□□□□□ -1.25
SRP54-206ENST00000555317 ADAMTSL4-AS1Q5T5F5 129 aa7.25□□□□□ -1.25
SRP54-206ENST00000555317 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
SRP54-206ENST00000555317 HIGD2AQ9BW72 106 aa7.25□□□□□ -1.25
SRP54-206ENST00000555317 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
SRP54-206ENST00000555317 CRYGAP11844 174 aa7.24□□□□□ -1.25
SRP54-206ENST00000555317 SNRPEP62304 92 aaKnown RBP7.24□□□□□ -1.25
SRP54-206ENST00000555317 TTTY13Q9BZ97 58 aa7.24□□□□□ -1.25
SRP54-206ENST00000555317 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
SRP54-206ENST00000555317 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
SRP54-206ENST00000555317 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
SRP54-206ENST00000555317 CBY1Q9Y3M2 126 aa7.23□□□□□ -1.25
SRP54-206ENST00000555317 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
SRP54-206ENST00000555317 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
SRP54-206ENST00000555317 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
SRP54-206ENST00000555317 SPANXCQ9NY87 97 aa7.22□□□□□ -1.25
SRP54-206ENST00000555317 SOSTDC1Q6X4U4 206 aa7.21□□□□□ -1.26
SRP54-206ENST00000555317 LITAFQ99732 161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms