RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SPATA45Q537H7 98 aa8.97□□□□□ -0.97
CHD8-208ENST00000555301 SERTAD4-AS1Q5TG53 156 aa8.97□□□□□ -0.97
CHD8-208ENST00000555301 DAND5Q8N907 189 aa8.97□□□□□ -0.97
CHD8-208ENST00000555301 MIEN1Q9BRT3 115 aa8.97□□□□□ -0.97
CHD8-208ENST00000555301 COX8AP10176 69 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 LITAFQ99732 161 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 C22orf24Q9Y442 160 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 HSPG2P98160 4391 aa8.96□□□□□ -0.98
CHD8-208ENST00000555301 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 LOC107984156A0A0G2JMH3 177 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
CHD8-208ENST00000555301 ADAMTSL4-AS1Q5T5F5 129 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 ARL17AQ8IVW1 177 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 Q8N1X5 172 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 NKAPP1Q8N9T2 125 aa8.95□□□□□ -0.98
CHD8-208ENST00000555301 DLEU1O43261 78 aa8.94□□□□□ -0.98
CHD8-208ENST00000555301 VPREB1P12018 145 aa8.94□□□□□ -0.98
CHD8-208ENST00000555301 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
CHD8-208ENST00000555301 S100A12P80511 92 aa8.93□□□□□ -0.98
CHD8-208ENST00000555301 Q6ZVH6 145 aa8.93□□□□□ -0.98
CHD8-208ENST00000555301 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
CHD8-208ENST00000555301 COPS9Q8WXC6 57 aa8.93□□□□□ -0.98
CHD8-208ENST00000555301 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
CHD8-208ENST00000555301 SPANXCQ9NY87 97 aa8.93□□□□□ -0.98
CHD8-208ENST00000555301 UBE2BP63146 152 aa8.92□□□□□ -0.98
CHD8-208ENST00000555301 LINC00308Q8TCZ7 52 aa8.92□□□□□ -0.98
CHD8-208ENST00000555301 C14orf144Q96I85 54 aa8.92□□□□□ -0.98
CHD8-208ENST00000555301 NPC2P61916 151 aa8.91□□□□□ -0.98
CHD8-208ENST00000555301 SLC25A34Q6PIV7 304 aa8.91□□□□□ -0.98
CHD8-208ENST00000555301 LOC105371267A0A1B0GV96 52 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 NDUFC2O95298 119 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 PLA2G1BP04054 148 aaKnown RBP8.9□□□□□ -0.98
CHD8-208ENST00000555301 IFITM1P13164 125 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 RPL37AP61513 92 aaKnown RBP8.9□□□□□ -0.98
CHD8-208ENST00000555301 Q5VSD8 79 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 SOSTDC1Q6X4U4 206 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 Q8NDZ9 215 aa8.9□□□□□ -0.98
CHD8-208ENST00000555301 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
CHD8-208ENST00000555301 HERC2O95714 4834 aa8.89□□□□□ -0.99
CHD8-208ENST00000555301 M0R378 163 aa8.89□□□□□ -0.99
CHD8-208ENST00000555301 SMIM6P0DI80 62 aa8.89□□□□□ -0.99
CHD8-208ENST00000555301 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
CHD8-208ENST00000555301 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
CHD8-208ENST00000555301 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD8-208ENST00000555301 FAT1Q14517 4588 aa8.88□□□□□ -0.99
CHD8-208ENST00000555301 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
CHD8-208ENST00000555301 GAGE10A6NGK3 116 aa8.87□□□□□ -0.99
CHD8-208ENST00000555301 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
CHD8-208ENST00000555301 NCR3O14931 201 aa8.86□□□□□ -0.99
CHD8-208ENST00000555301 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
CHD8-208ENST00000555301 MUSTN1Q8IVN3 82 aa8.86□□□□□ -0.99
CHD8-208ENST00000555301 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
CHD8-208ENST00000555301 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
CHD8-208ENST00000555301 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
CHD8-208ENST00000555301 IGLV1-50A0A075B6I6 118 aa8.85□□□□□ -0.99
CHD8-208ENST00000555301 RPL37AP8A6NKH3 93 aa8.85□□□□□ -0.99
CHD8-208ENST00000555301 IGKV2-28A0A075B6P5 120 aa8.84□□□□□ -0.99
CHD8-208ENST00000555301 IGKV2D-28P01615 120 aa8.84□□□□□ -0.99
CHD8-208ENST00000555301 KRTAP11-1Q8IUC1 163 aa8.84□□□□□ -0.99
CHD8-208ENST00000555301 LINC00518Q8N0U6 118 aa8.84□□□□□ -0.99
CHD8-208ENST00000555301 HIST1H4GQ99525 98 aa8.84□□□□□ -0.99
CHD8-208ENST00000555301 C1orf137Q5JT78 98 aa8.83□□□□□ -1
CHD8-208ENST00000555301 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
CHD8-208ENST00000555301 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
CHD8-208ENST00000555301 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
CHD8-208ENST00000555301 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
CHD8-208ENST00000555301 DDTP30046 118 aa8.81□□□□□ -1
CHD8-208ENST00000555301 TRBV10-3A0A0K0K1G6 114 aa8.8□□□□□ -1
CHD8-208ENST00000555301 TAL2Q16559 108 aa8.8□□□□□ -1
CHD8-208ENST00000555301 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
CHD8-208ENST00000555301 PRYO14603 147 aa8.79□□□□□ -1
CHD8-208ENST00000555301 BCE1O60756 84 aa8.79□□□□□ -1
CHD8-208ENST00000555301 IGLV6-57P01721 117 aa8.79□□□□□ -1
CHD8-208ENST00000555301 REG3GQ6UW15 175 aa8.79□□□□□ -1
CHD8-208ENST00000555301 TMEM126AQ9H061 195 aa8.79□□□□□ -1
CHD8-208ENST00000555301 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
CHD8-208ENST00000555301 VPS13BQ7Z7G8 4022 aa8.79□□□□□ -1
CHD8-208ENST00000555301 IGLV7-43P04211 117 aa8.78□□□□□ -1
CHD8-208ENST00000555301 OR13C6PQ8NH95 151 aa8.78□□□□□ -1
CHD8-208ENST00000555301 C12orf57Q99622 126 aa8.78□□□□□ -1
CHD8-208ENST00000555301 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
CHD8-208ENST00000555301 A4D1N5 150 aa8.77□□□□□ -1.01
CHD8-208ENST00000555301 TRAV13-2A0A0B4J235 113 aa8.76□□□□□ -1.01
CHD8-208ENST00000555301 LINC00337Q8N6G1 96 aa8.76□□□□□ -1.01
CHD8-208ENST00000555301 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
CHD8-208ENST00000555301 A6NDN8 102 aa8.75□□□□□ -1.01
CHD8-208ENST00000555301 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
CHD8-208ENST00000555301 HSD52Q0P140 79 aa8.75□□□□□ -1.01
CHD8-208ENST00000555301 SPINK6Q6UWN8 80 aa8.75□□□□□ -1.01
CHD8-208ENST00000555301 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
CHD8-208ENST00000555301 ZNF861PO60384 105 aa8.74□□□□□ -1.01
CHD8-208ENST00000555301 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
CHD8-208ENST00000555301 SPRR1AP35321 89 aa8.74□□□□□ -1.01
CHD8-208ENST00000555301 RPL28P46779 137 aaKnown RBP8.74□□□□□ -1.01
CHD8-208ENST00000555301 UBE2AP49459 152 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms