RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 C6orf48Q9UBA6 75 aa14.24□□□□□ -0.13
ARHGEF40-204ENST00000555038 GAGE2DQ9UEU5 116 aa14.24□□□□□ -0.13
ARHGEF40-204ENST00000555038 ZNF561-AS1K7EIQ3 104 aa14.24□□□□□ -0.13
ARHGEF40-204ENST00000555038 C2orf48Q96LS8 159 aa14.23□□□□□ -0.13
ARHGEF40-204ENST00000555038 NCR3O14931 201 aa14.22□□□□□ -0.13
ARHGEF40-204ENST00000555038 LINC00526Q96FQ7 95 aa14.22□□□□□ -0.13
ARHGEF40-204ENST00000555038 Q8NDZ9 215 aa14.22□□□□□ -0.13
ARHGEF40-204ENST00000555038 Q8N814 137 aa14.21□□□□□ -0.13
ARHGEF40-204ENST00000555038 C1orf43Q9BWL3 253 aa14.21□□□□□ -0.13
ARHGEF40-204ENST00000555038 IGLV6-57P01721 117 aa14.2□□□□□ -0.14
ARHGEF40-204ENST00000555038 CAMK2N2Q96S95 79 aa14.2□□□□□ -0.14
ARHGEF40-204ENST00000555038 FBN1P35555 2871 aaKnown RBP14.19□□□□□ -0.14
ARHGEF40-204ENST00000555038 TRAV10A0A0B4J240 114 aa14.19□□□□□ -0.14
ARHGEF40-204ENST00000555038 SDIM1Q6ZPB5 146 aa14.19□□□□□ -0.14
ARHGEF40-204ENST00000555038 ANK2Q01484 3957 aa14.19□□□□□ -0.14
ARHGEF40-204ENST00000555038 DNAH10OSP0CZ25 163 aa14.18□□□□□ -0.14
ARHGEF40-204ENST00000555038 C6orf99Q4VX62 202 aa14.18□□□□□ -0.14
ARHGEF40-204ENST00000555038 TM2D3Q9BRN9 247 aa14.18□□□□□ -0.14
ARHGEF40-204ENST00000555038 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
ARHGEF40-204ENST00000555038 TRBV7-7A0A0K0K1E9 115 aa14.17□□□□□ -0.14
ARHGEF40-204ENST00000555038 TTC32Q5I0X7 151 aa14.17□□□□□ -0.14
ARHGEF40-204ENST00000555038 LINC00643Q86TS7 51 aa14.17□□□□□ -0.14
ARHGEF40-204ENST00000555038 C15orf56Q8N910 161 aa14.17□□□□□ -0.14
ARHGEF40-204ENST00000555038 TMEM256-PLSCR3K7ERE1 68 aa14.16□□□□□ -0.14
ARHGEF40-204ENST00000555038 HIGD2BQ4VC39 106 aa14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 IMUPQ9GZP8 106 aa14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 JMJD7-PLA2G4BH0Y9G9 81 aa14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 SLPIP03973 132 aa14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 RPL18AQ02543 176 aaKnown RBP14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 LINC00575Q6W349 94 aa14.14□□□□□ -0.15
ARHGEF40-204ENST00000555038 GAGE2AQ6NT46 116 aa14.13□□□□□ -0.15
ARHGEF40-204ENST00000555038 NDUFC2-KCTD14E9PQ53 114 aa14.11□□□□□ -0.15
ARHGEF40-204ENST00000555038 Q6ZRU5 148 aa14.11□□□□□ -0.15
ARHGEF40-204ENST00000555038 PKD1L1Q8TDX9 2849 aa14.11□□□□□ -0.15
ARHGEF40-204ENST00000555038 IGKV2D-24A0A075B6R9 120 aa14.11□□□□□ -0.15
ARHGEF40-204ENST00000555038 H3BQ85 93 aa14.11□□□□□ -0.15
ARHGEF40-204ENST00000555038 C9orf129Q5T035 196 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-204ENST00000555038 C14orf132Q9NPU4 83 aa14.1□□□□□ -0.15
ARHGEF40-204ENST00000555038 XAGE1AQ9HD64 81 aa14.09□□□□□ -0.15
ARHGEF40-204ENST00000555038 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
ARHGEF40-204ENST00000555038 hADV29S1A0JD25 119 aa14.09□□□□□ -0.15
ARHGEF40-204ENST00000555038 K7EIL1 84 aa14.08□□□□□ -0.16
ARHGEF40-204ENST00000555038 VPREB1P12018 145 aa14.08□□□□□ -0.16
ARHGEF40-204ENST00000555038 SMCR5Q8TEV8 140 aa14.08□□□□□ -0.16
ARHGEF40-204ENST00000555038 ANAPC13Q9BS18 74 aa14.08□□□□□ -0.16
ARHGEF40-204ENST00000555038 TRBV7-6A0A0J9YX20 115 aa14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 TRBV10-3A0A0K0K1G6 114 aa14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 NDUFV3P56181 108 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 DIRC1Q969H9 104 aa14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 TENM3Q9P273 2699 aa14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 COL6A5A8TX70 2615 aa14.07□□□□□ -0.16
ARHGEF40-204ENST00000555038 M0R378 163 aa14.06□□□□□ -0.16
ARHGEF40-204ENST00000555038 SYCNQ0VAF6 134 aa14.05□□□□□ -0.16
ARHGEF40-204ENST00000555038 LINC00588Q9Y4M8 146 aa14.04□□□□□ -0.16
ARHGEF40-204ENST00000555038 MDFIQ99750 246 aa14.04□□□□□ -0.16
ARHGEF40-204ENST00000555038 CCKP06307 115 aa14.03□□□□□ -0.16
ARHGEF40-204ENST00000555038 RMI2Q96E14 147 aa14.03□□□□□ -0.16
ARHGEF40-204ENST00000555038 ZNF73O43830 326 aaPredicted RBP14.02□□□□□ -0.16
ARHGEF40-204ENST00000555038 GHRHP01286 108 aa14.02□□□□□ -0.16
ARHGEF40-204ENST00000555038 PRB2P02812 416 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF40-204ENST00000555038 UPK3BQ9BT76 320 aa14.01□□□□□ -0.17
ARHGEF40-204ENST00000555038 HUWE1Q7Z6Z7 4374 aaKnown RBP14□□□□□ -0.17
ARHGEF40-204ENST00000555038 TLX1NBP0CAT3 122 aa13.99□□□□□ -0.17
ARHGEF40-204ENST00000555038 COX7BP24311 80 aa13.99□□□□□ -0.17
ARHGEF40-204ENST00000555038 ELOF1P60002 83 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-204ENST00000555038 KRTAP21-3Q3LHN1 58 aa13.99□□□□□ -0.17
ARHGEF40-204ENST00000555038 Q6ZRP5 223 aa13.99□□□□□ -0.17
ARHGEF40-204ENST00000555038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-204ENST00000555038 MRAPQ8TCY5 172 aa13.98□□□□□ -0.17
ARHGEF40-204ENST00000555038 NHLRC4P0CG21 123 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF40-204ENST00000555038 Q6JHZ5 121 aa13.96□□□□□ -0.18
ARHGEF40-204ENST00000555038 LINC00846Q9NV44 126 aa13.96□□□□□ -0.18
ARHGEF40-204ENST00000555038 Q6ZQY7 126 aa13.94□□□□□ -0.18
ARHGEF40-204ENST00000555038 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
ARHGEF40-204ENST00000555038 NOTCH1P46531 2555 aa13.93□□□□□ -0.18
ARHGEF40-204ENST00000555038 LOC110117498A0A087WWA1 95 aa13.93□□□□□ -0.18
ARHGEF40-204ENST00000555038 RBM3P98179 157 aaKnown RBP13.93□□□□□ -0.18
ARHGEF40-204ENST00000555038 PDE6GP18545 87 aa13.91□□□□□ -0.18
ARHGEF40-204ENST00000555038 DNAH1Q9P2D7 4330 aa13.91□□□□□ -0.18
ARHGEF40-204ENST00000555038 USP17L23D6RBM5 183 aa13.91□□□□□ -0.18
ARHGEF40-204ENST00000555038 LAMTOR3Q9UHA4 124 aa13.9□□□□□ -0.18
ARHGEF40-204ENST00000555038 NKAPP1Q8N9T2 125 aa13.89□□□□□ -0.19
ARHGEF40-204ENST00000555038 LINC00528Q8N1L1 170 aa13.88□□□□□ -0.19
ARHGEF40-204ENST00000555038 FAM236AA0A1B0GUQ0 79 aa13.88□□□□□ -0.19
ARHGEF40-204ENST00000555038 FAM236BA0A1B0GV22 79 aa13.88□□□□□ -0.19
ARHGEF40-204ENST00000555038 ATP5EP2Q5VTU8 51 aa13.88□□□□□ -0.19
ARHGEF40-204ENST00000555038 KCNQ1DNQ9H478 68 aa13.88□□□□□ -0.19
ARHGEF40-204ENST00000555038 Q6ZQT0 140 aa13.87□□□□□ -0.19
ARHGEF40-204ENST00000555038 IGLV5-37A0A075B6J1 123 aa13.86□□□□□ -0.19
ARHGEF40-204ENST00000555038 NBEAL1Q6ZS30 2694 aa13.86□□□□□ -0.19
ARHGEF40-204ENST00000555038 DSCR8Q96T75 97 aa13.85□□□□□ -0.19
ARHGEF40-204ENST00000555038 CASC10Q5T4H9 136 aa13.82□□□□□ -0.2
ARHGEF40-204ENST00000555038 SERTAD4-AS1Q5TG53 156 aa13.82□□□□□ -0.2
ARHGEF40-204ENST00000555038 C7orf33Q8WU49 177 aa13.82□□□□□ -0.2
ARHGEF40-204ENST00000555038 UBL5Q9BZL1 73 aa13.82□□□□□ -0.2
ARHGEF40-204ENST00000555038 HIST1H4AP62805 103 aaKnown RBP13.81□□□□□ -0.2
ARHGEF40-204ENST00000555038 DNHD1Q96M86 4753 aa13.79□□□□□ -0.2
ARHGEF40-204ENST00000555038 IGKV3D-7A0A0C4DH55 119 aa13.78□□□□□ -0.2
ARHGEF40-204ENST00000555038 LOC107984640A0A0U1RRK4 108 aa13.78□□□□□ -0.2
ARHGEF40-204ENST00000555038 PRYO14603 147 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms