RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 KRTAP29-1A8MX34 341 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-214ENST00000554928 Q8NDZ9 215 aa7.59□□□□□ -1.19
SYNE2-214ENST00000554928 C22orf24Q9Y442 160 aa7.59□□□□□ -1.19
SYNE2-214ENST00000554928 TNXBP22105 4242 aa7.59□□□□□ -1.19
SYNE2-214ENST00000554928 A0A0U1RRA0 63 aa7.58□□□□□ -1.2
SYNE2-214ENST00000554928 SYS1-DBNDD2H3BUS1 97 aa7.58□□□□□ -1.2
SYNE2-214ENST00000554928 DPM2O94777 84 aa7.58□□□□□ -1.2
SYNE2-214ENST00000554928 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
SYNE2-214ENST00000554928 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
SYNE2-214ENST00000554928 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
SYNE2-214ENST00000554928 DMBT1Q9UGM3 2413 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-214ENST00000554928 IGKCP01834 107 aa7.57□□□□□ -1.2
SYNE2-214ENST00000554928 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
SYNE2-214ENST00000554928 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
SYNE2-214ENST00000554928 PLNP26678 52 aa7.56□□□□□ -1.2
SYNE2-214ENST00000554928 UBE2BP63146 152 aa7.56□□□□□ -1.2
SYNE2-214ENST00000554928 GAGE10A6NGK3 116 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 LEPROTO15243 131 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 PLA2G2DQ9UNK4 145 aa7.55□□□□□ -1.2
SYNE2-214ENST00000554928 RPL37AP8A6NKH3 93 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 OXTP01178 125 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 VPREB1P12018 145 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 LINC00158P58513 81 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
SYNE2-214ENST00000554928 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
SYNE2-214ENST00000554928 IGLV5-37A0A075B6J1 123 aa7.53□□□□□ -1.2
SYNE2-214ENST00000554928 J3QQQ9 107 aa7.53□□□□□ -1.2
SYNE2-214ENST00000554928 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
SYNE2-214ENST00000554928 KRTAP9-9Q9BYP9 154 aa7.53□□□□□ -1.2
SYNE2-214ENST00000554928 KRTAP9-4Q9BYQ2 154 aa7.53□□□□□ -1.2
SYNE2-214ENST00000554928 KRTDAPP60985 99 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 COX17Q14061 63 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 PET117Q6UWS5 81 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
SYNE2-214ENST00000554928 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
SYNE2-214ENST00000554928 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
SYNE2-214ENST00000554928 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
SYNE2-214ENST00000554928 IGKV2D-26A0A0A0MRZ7 120 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 E9PLD3 99 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 HERVK_113P61574 105 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 LBHQ53QV2 105 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-214ENST00000554928 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 DAND5Q8N907 189 aa7.5□□□□□ -1.21
SYNE2-214ENST00000554928 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
SYNE2-214ENST00000554928 HERV-K104P63124 156 aa7.49□□□□□ -1.21
SYNE2-214ENST00000554928 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
SYNE2-214ENST00000554928 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
SYNE2-214ENST00000554928 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
SYNE2-214ENST00000554928 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
SYNE2-214ENST00000554928 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
SYNE2-214ENST00000554928 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
SYNE2-214ENST00000554928 HIST1H2BLQ99880 126 aa7.47□□□□□ -1.21
SYNE2-214ENST00000554928 A0A0J9YXY3 114 aa7.46□□□□□ -1.22
SYNE2-214ENST00000554928 TMEM238C9JI98 176 aa7.46□□□□□ -1.22
SYNE2-214ENST00000554928 ANKRD39Q53RE8 183 aa7.46□□□□□ -1.22
SYNE2-214ENST00000554928 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
SYNE2-214ENST00000554928 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
SYNE2-214ENST00000554928 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 H0Y9J4 135 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 NCR3O14931 201 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 BCE1O60756 84 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 NMUP48645 174 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
SYNE2-214ENST00000554928 SOSTDC1Q6X4U4 206 aa7.45□□□□□ -1.22
SYNE2-214ENST00000554928 ZNF861PO60384 105 aa7.44□□□□□ -1.22
SYNE2-214ENST00000554928 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
SYNE2-214ENST00000554928 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
SYNE2-214ENST00000554928 REG3GQ6UW15 175 aa7.44□□□□□ -1.22
SYNE2-214ENST00000554928 DIRC1Q969H9 104 aa7.44□□□□□ -1.22
SYNE2-214ENST00000554928 M0R378 163 aa7.43□□□□□ -1.22
SYNE2-214ENST00000554928 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
SYNE2-214ENST00000554928 NPC2P61916 151 aa7.43□□□□□ -1.22
SYNE2-214ENST00000554928 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
SYNE2-214ENST00000554928 LITAFQ99732 161 aa7.43□□□□□ -1.22
SYNE2-214ENST00000554928 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
SYNE2-214ENST00000554928 TMEM126AQ9H061 195 aa7.42□□□□□ -1.22
SYNE2-214ENST00000554928 LOC107984156A0A0G2JMH3 177 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 C20orf202A1L168 122 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 ZNF815PA8K554 130 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 S100A2P29034 98 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 PRLHP81277 87 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 ARL17AQ8IVW1 177 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 PRR26Q8N8Z3 221 aa7.41□□□□□ -1.22
SYNE2-214ENST00000554928 S100A6P06703 90 aa7.4□□□□□ -1.22
SYNE2-214ENST00000554928 TRBV10-3A0A0K0K1G6 114 aa7.39□□□□□ -1.23
SYNE2-214ENST00000554928 C5orf52A6NGY3 159 aa7.39□□□□□ -1.23
SYNE2-214ENST00000554928 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
SYNE2-214ENST00000554928 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
SYNE2-214ENST00000554928 RPL28P46779 137 aaKnown RBP7.38□□□□□ -1.23
SYNE2-214ENST00000554928 UBE2AP49459 152 aa7.38□□□□□ -1.23
SYNE2-214ENST00000554928 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms