RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
TUBB3-207ENST00000554927 ATP6V1G1O75348 118 aa7.75□□□□□ -1.17
TUBB3-207ENST00000554927 CHCHD1Q96BP2 118 aaKnown RBP7.75□□□□□ -1.17
TUBB3-207ENST00000554927 A0A087X002 238 aa7.74□□□□□ -1.17
TUBB3-207ENST00000554927 LINC00158P58513 81 aa7.74□□□□□ -1.17
TUBB3-207ENST00000554927 FAM19A1Q7Z5A9 133 aa7.73□□□□□ -1.17
TUBB3-207ENST00000554927 VPREB1P12018 145 aa7.72□□□□□ -1.17
TUBB3-207ENST00000554927 LINC01547P58512 204 aaPredicted RBP7.72□□□□□ -1.17
TUBB3-207ENST00000554927 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
TUBB3-207ENST00000554927 IFI27L1Q96BM0 104 aa7.72□□□□□ -1.17
TUBB3-207ENST00000554927 IGLV7-46A0A075B6I9 117 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 TRAV12-1A0A0B4J245 112 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 HSBP1O75506 76 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 SCO1O75880 301 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
TUBB3-207ENST00000554927 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
TUBB3-207ENST00000554927 LINC00587B1AMM8 73 aa7.7□□□□□ -1.18
TUBB3-207ENST00000554927 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
TUBB3-207ENST00000554927 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 PRLHP81277 87 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
TUBB3-207ENST00000554927 TMEM238C9JI98 176 aa7.68□□□□□ -1.18
TUBB3-207ENST00000554927 M0R378 163 aa7.68□□□□□ -1.18
TUBB3-207ENST00000554927 HERV-K104P63124 156 aa7.68□□□□□ -1.18
TUBB3-207ENST00000554927 CBLN2Q8IUK8 224 aa7.68□□□□□ -1.18
TUBB3-207ENST00000554927 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
TUBB3-207ENST00000554927 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
TUBB3-207ENST00000554927 S100A12P80511 92 aa7.66□□□□□ -1.18
TUBB3-207ENST00000554927 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
TUBB3-207ENST00000554927 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 H0Y8G0 127 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 SMIM13P0DJ93 91 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 BOD1L2Q8IYS8 172 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 FAM19A2Q8N3H0 131 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 YPEL4Q96NS1 127 aa7.65□□□□□ -1.18
TUBB3-207ENST00000554927 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
TUBB3-207ENST00000554927 PLEKHB2Q96CS7 222 aa7.64□□□□□ -1.19
TUBB3-207ENST00000554927 PPDPFQ9H3Y8 114 aa7.64□□□□□ -1.19
TUBB3-207ENST00000554927 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
TUBB3-207ENST00000554927 LEPROTL1O95214 131 aa7.63□□□□□ -1.19
TUBB3-207ENST00000554927 CTAG1AP78358 180 aa7.63□□□□□ -1.19
TUBB3-207ENST00000554927 MIR7-3HGQ8N6C7 128 aa7.63□□□□□ -1.19
TUBB3-207ENST00000554927 ZNF706Q9Y5V0 76 aaPredicted RBP7.63□□□□□ -1.19
TUBB3-207ENST00000554927 TRGC2P03986 189 aa7.62□□□□□ -1.19
TUBB3-207ENST00000554927 Q8NDZ9 215 aa7.62□□□□□ -1.19
TUBB3-207ENST00000554927 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
TUBB3-207ENST00000554927 PRYO14603 147 aa7.61□□□□□ -1.19
TUBB3-207ENST00000554927 PLNP26678 52 aa7.61□□□□□ -1.19
TUBB3-207ENST00000554927 HERVK_113P61574 105 aa7.61□□□□□ -1.19
TUBB3-207ENST00000554927 C4orf48Q5BLP8 95 aa7.61□□□□□ -1.19
TUBB3-207ENST00000554927 LINC00337Q8N6G1 96 aa7.61□□□□□ -1.19
TUBB3-207ENST00000554927 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
TUBB3-207ENST00000554927 NCR3O14931 201 aa7.6□□□□□ -1.19
TUBB3-207ENST00000554927 LEPROTO15243 131 aa7.59□□□□□ -1.19
TUBB3-207ENST00000554927 SERF1AO75920 110 aa7.59□□□□□ -1.19
TUBB3-207ENST00000554927 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
TUBB3-207ENST00000554927 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
TUBB3-207ENST00000554927 DPM2O94777 84 aa7.58□□□□□ -1.2
TUBB3-207ENST00000554927 FABP4P15090 132 aa7.58□□□□□ -1.2
TUBB3-207ENST00000554927 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
TUBB3-207ENST00000554927 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
TUBB3-207ENST00000554927 NMUP48645 174 aa7.57□□□□□ -1.2
TUBB3-207ENST00000554927 SPRR4Q96PI1 79 aa7.57□□□□□ -1.2
TUBB3-207ENST00000554927 J3QQQ9 107 aa7.56□□□□□ -1.2
TUBB3-207ENST00000554927 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
TUBB3-207ENST00000554927 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
TUBB3-207ENST00000554927 IGKCP01834 107 aa7.55□□□□□ -1.2
TUBB3-207ENST00000554927 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
TUBB3-207ENST00000554927 C3orf22Q8N5N4 141 aa7.55□□□□□ -1.2
TUBB3-207ENST00000554927 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
TUBB3-207ENST00000554927 DDTP30046 118 aa7.54□□□□□ -1.2
TUBB3-207ENST00000554927 SPRR1AP35321 89 aa7.54□□□□□ -1.2
TUBB3-207ENST00000554927 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
TUBB3-207ENST00000554927 KRTAP4-1Q9BYQ7 146 aa7.54□□□□□ -1.2
TUBB3-207ENST00000554927 LOC107984156A0A0G2JMH3 177 aa7.53□□□□□ -1.2
TUBB3-207ENST00000554927 ARL17AQ8IVW1 177 aa7.53□□□□□ -1.2
TUBB3-207ENST00000554927 DAND5Q8N907 189 aa7.53□□□□□ -1.2
TUBB3-207ENST00000554927 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
TUBB3-207ENST00000554927 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
TUBB3-207ENST00000554927 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
TUBB3-207ENST00000554927 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
TUBB3-207ENST00000554927 LINC00310P59036 64 aa7.51□□□□□ -1.21
TUBB3-207ENST00000554927 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
TUBB3-207ENST00000554927 GAGE2AQ6NT46 116 aa7.51□□□□□ -1.21
TUBB3-207ENST00000554927 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
TUBB3-207ENST00000554927 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
TUBB3-207ENST00000554927 CBY1Q9Y3M2 126 aa7.51□□□□□ -1.21
TUBB3-207ENST00000554927 COLCA2A8K830 154 aa7.5□□□□□ -1.21
TUBB3-207ENST00000554927 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
TUBB3-207ENST00000554927 NDUFC2O95298 119 aa7.5□□□□□ -1.21
TUBB3-207ENST00000554927 B5MCH6 92 aa7.49□□□□□ -1.21
TUBB3-207ENST00000554927 SPINK1P00995 79 aa7.49□□□□□ -1.21
TUBB3-207ENST00000554927 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
TUBB3-207ENST00000554927 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
TUBB3-207ENST00000554927 Q8NBF4 154 aa7.49□□□□□ -1.21
TUBB3-207ENST00000554927 E9PLD3 99 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms