RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 C9orf129Q5T035 196 aaKnown RBP5.1□□□□□ -1.59
LINC01397-201ENST00000554808 ARL17AQ8IVW1 177 aa5.1□□□□□ -1.59
LINC01397-201ENST00000554808 MIR7-3HGQ8N6C7 128 aa5.1□□□□□ -1.59
LINC01397-201ENST00000554808 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 PANO1I0J062 215 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 SMIM6P0DI80 62 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 COX8AP10176 69 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 IFITM1P13164 125 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 LBHQ53QV2 105 aaPredicted RBP5.09□□□□□ -1.59
LINC01397-201ENST00000554808 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 SPANXDQ9BXN6 97 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.59
LINC01397-201ENST00000554808 FAT1Q14517 4588 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 FAM229AH3BQW9 127 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 M0QXV9 152 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 NDUFC2O95298 119 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 FAM19A5Q7Z5A7 132 aaPredicted RBP5.08□□□□□ -1.6
LINC01397-201ENST00000554808 PCP2Q8IVA1 136 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 BOD1L2Q8IYS8 172 aa5.08□□□□□ -1.6
LINC01397-201ENST00000554808 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
LINC01397-201ENST00000554808 A0A0U1RRA0 63 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 LOC105371267A0A1B0GV96 52 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 A0A1W2PNN7 141 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
LINC01397-201ENST00000554808 SLC25A34Q6PIV7 304 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 MRPL55Q7Z7F7 128 aaKnown RBP5.07□□□□□ -1.6
LINC01397-201ENST00000554808 TTTY13Q9BZ97 58 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
LINC01397-201ENST00000554808 TRBV10-2A0A0K0K1G8 114 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 VPREB1P12018 145 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 Q8N1X5 172 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 LITAFQ99732 161 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 HIGD1BQ9P298 99 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 C22orf24Q9Y442 160 aa5.06□□□□□ -1.6
LINC01397-201ENST00000554808 FAM168BA1KXE4 195 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 M0R378 163 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 UBE2BP63146 152 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 SRSF9Q13242 221 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC01397-201ENST00000554808 SERTAD4-AS1Q5TG53 156 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 LINC00518Q8N0U6 118 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 LINC00528Q8N1L1 170 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 DAND5Q8N907 189 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 LINC00308Q8TCZ7 52 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
LINC01397-201ENST00000554808 RPL37AP61513 92 aaKnown RBP5.04□□□□□ -1.6
LINC01397-201ENST00000554808 ADAMTSL4-AS1Q5T5F5 129 aa5.04□□□□□ -1.6
LINC01397-201ENST00000554808 HAMPP81172 84 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 TAL2Q16559 108 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 Q5VSD8 79 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
LINC01397-201ENST00000554808 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 C14orf144Q96I85 54 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 UQCR10Q9UDW1 63 aa5.03□□□□□ -1.6
LINC01397-201ENST00000554808 DMBT1Q9UGM3 2413 aaPredicted RBP5.03□□□□□ -1.6
LINC01397-201ENST00000554808 SMR3BP02814 79 aaPredicted RBP5.02□□□□□ -1.61
LINC01397-201ENST00000554808 NPC2P61916 151 aa5.02□□□□□ -1.61
LINC01397-201ENST00000554808 S100A7L2Q5SY68 101 aa5.02□□□□□ -1.61
LINC01397-201ENST00000554808 SOSTDC1Q6X4U4 206 aa5.02□□□□□ -1.61
LINC01397-201ENST00000554808 LINC00167Q96N53 147 aa5.02□□□□□ -1.61
LINC01397-201ENST00000554808 HIST1H4GQ99525 98 aa5.02□□□□□ -1.61
LINC01397-201ENST00000554808 IGLV1-50A0A075B6I6 118 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 TMEM238LA0A1B0GVL6 79 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 A6NJY4 79 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 PRYO14603 147 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 NCR3O14931 201 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
LINC01397-201ENST00000554808 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
LINC01397-201ENST00000554808 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
LINC01397-201ENST00000554808 TSTD3H0UI37 97 aa5□□□□□ -1.61
LINC01397-201ENST00000554808 DDTP30046 118 aa5□□□□□ -1.61
LINC01397-201ENST00000554808 PSORS1C2Q9UIG4 136 aa5□□□□□ -1.61
LINC01397-201ENST00000554808 IGKV2-28A0A075B6P5 120 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 RPL37AP8A6NKH3 93 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 IGKV2D-28P01615 120 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 REG3GQ6UW15 175 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 C2orf91Q6ZV80 131 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 Q8NDZ9 215 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 C12orf57Q99622 126 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
LINC01397-201ENST00000554808 GAGE10A6NGK3 116 aa4.98□□□□□ -1.61
LINC01397-201ENST00000554808 BCE1O60756 84 aa4.98□□□□□ -1.61
LINC01397-201ENST00000554808 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
LINC01397-201ENST00000554808 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
LINC01397-201ENST00000554808 HNRNPA3P51991 378 aaKnown RBP4.98□□□□□ -1.61
LINC01397-201ENST00000554808 HSD52Q0P140 79 aa4.98□□□□□ -1.61
LINC01397-201ENST00000554808 CEND1Q8N111 149 aa4.98□□□□□ -1.61
LINC01397-201ENST00000554808 FLG2Q5D862 2391 aaPredicted RBP4.97□□□□□ -1.61
LINC01397-201ENST00000554808 TRAV23DV6A0A075B6W5 121 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 TRBV10-3A0A0K0K1G6 114 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 A4D1N5 150 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 H0Y9J4 135 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 EIF4EBP3O60516 100 aaPredicted RBP4.97□□□□□ -1.61
LINC01397-201ENST00000554808 SPRR1AP35321 89 aa4.97□□□□□ -1.61
LINC01397-201ENST00000554808 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms