RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
VTI1B-204ENST00000554659 SPATA3Q8NHX4 192 aa9.7□□□□□ -0.86
VTI1B-204ENST00000554659 A0A1B0GU69 56 aa9.7□□□□□ -0.86
VTI1B-204ENST00000554659 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
VTI1B-204ENST00000554659 PKD1L2Q7Z442 2459 aa9.69□□□□□ -0.86
VTI1B-204ENST00000554659 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
VTI1B-204ENST00000554659 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
VTI1B-204ENST00000554659 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
VTI1B-204ENST00000554659 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
VTI1B-204ENST00000554659 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
VTI1B-204ENST00000554659 A0A1B0GW54 56 aa9.66□□□□□ -0.86
VTI1B-204ENST00000554659 RPS28P62857 69 aaKnown RBP9.65□□□□□ -0.86
VTI1B-204ENST00000554659 CENPFP49454 3210 aa9.65□□□□□ -0.86
VTI1B-204ENST00000554659 DNAH12Q6ZR08 3092 aa9.65□□□□□ -0.87
VTI1B-204ENST00000554659 CEP350Q5VT06 3117 aa9.65□□□□□ -0.87
VTI1B-204ENST00000554659 C7orf65Q6ZTY9 151 aa9.64□□□□□ -0.87
VTI1B-204ENST00000554659 KLK9Q2XQG4 91 aa9.64□□□□□ -0.87
VTI1B-204ENST00000554659 C6orf48Q9UBA6 75 aa9.63□□□□□ -0.87
VTI1B-204ENST00000554659 FHL3Q13643 280 aa9.63□□□□□ -0.87
VTI1B-204ENST00000554659 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
VTI1B-204ENST00000554659 ELOF1P60002 83 aaKnown RBP9.62□□□□□ -0.87
VTI1B-204ENST00000554659 Q6ZQT0 140 aa9.62□□□□□ -0.87
VTI1B-204ENST00000554659 ACYP2P14621 99 aa9.61□□□□□ -0.87
VTI1B-204ENST00000554659 WDR87Q6ZQQ6 2873 aa9.61□□□□□ -0.87
VTI1B-204ENST00000554659 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
VTI1B-204ENST00000554659 LITAFQ99732 161 aa9.59□□□□□ -0.87
VTI1B-204ENST00000554659 ATP11AUNQ6ZP68 121 aa9.59□□□□□ -0.87
VTI1B-204ENST00000554659 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
VTI1B-204ENST00000554659 PTPRBP23467 1997 aa9.58□□□□□ -0.88
VTI1B-204ENST00000554659 H3BNG1 76 aa9.58□□□□□ -0.88
VTI1B-204ENST00000554659 FSHBP01225 129 aa9.57□□□□□ -0.88
VTI1B-204ENST00000554659 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
VTI1B-204ENST00000554659 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
VTI1B-204ENST00000554659 USP9YO00507 2555 aaPredicted RBP9.55□□□□□ -0.88
VTI1B-204ENST00000554659 COL4A2P08572 1712 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 MOBPQ13875 183 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 Q8NBF4 154 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
VTI1B-204ENST00000554659 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
VTI1B-204ENST00000554659 H3BPC8 53 aa9.53□□□□□ -0.88
VTI1B-204ENST00000554659 Q6ZRX8 168 aa9.53□□□□□ -0.88
VTI1B-204ENST00000554659 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
VTI1B-204ENST00000554659 COL27A1Q8IZC6 1860 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-204ENST00000554659 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
VTI1B-204ENST00000554659 LINC00476Q8WZB0 136 aa9.5□□□□□ -0.89
VTI1B-204ENST00000554659 SPINT4Q6UDR6 99 aa9.49□□□□□ -0.89
VTI1B-204ENST00000554659 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
VTI1B-204ENST00000554659 NHLRC4P0CG21 123 aaPredicted RBP9.47□□□□□ -0.89
VTI1B-204ENST00000554659 VPREB1P12018 145 aa9.47□□□□□ -0.89
VTI1B-204ENST00000554659 IGLV6-57P01721 117 aa9.46□□□□□ -0.9
VTI1B-204ENST00000554659 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.9
VTI1B-204ENST00000554659 A8MUN3 132 aa9.44□□□□□ -0.9
VTI1B-204ENST00000554659 Q8NAQ8 132 aa9.44□□□□□ -0.9
VTI1B-204ENST00000554659 ST20-AS1Q8NBB2 130 aa9.44□□□□□ -0.9
VTI1B-204ENST00000554659 CEP295Q9C0D2 2601 aa9.44□□□□□ -0.9
VTI1B-204ENST00000554659 ANKRD11Q6UB99 2663 aaPredicted RBP9.43□□□□□ -0.9
VTI1B-204ENST00000554659 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
VTI1B-204ENST00000554659 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
VTI1B-204ENST00000554659 MDFIQ99750 246 aa9.42□□□□□ -0.9
VTI1B-204ENST00000554659 LINC00313P59037 77 aa9.41□□□□□ -0.9
VTI1B-204ENST00000554659 C16orf90A8MZG2 172 aa9.41□□□□□ -0.9
VTI1B-204ENST00000554659 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
VTI1B-204ENST00000554659 MTORP42345 2549 aa9.4□□□□□ -0.9
VTI1B-204ENST00000554659 EPM2AB3EWF7 344 aa9.4□□□□□ -0.91
VTI1B-204ENST00000554659 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.91
VTI1B-204ENST00000554659 LINC01600Q96MT4 127 aa9.4□□□□□ -0.91
VTI1B-204ENST00000554659 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
VTI1B-204ENST00000554659 Q6ZRP5 223 aa9.39□□□□□ -0.91
VTI1B-204ENST00000554659 ACANP16112 2415 aa9.38□□□□□ -0.91
VTI1B-204ENST00000554659 COA5Q86WW8 74 aa9.37□□□□□ -0.91
VTI1B-204ENST00000554659 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
VTI1B-204ENST00000554659 EIF4EBP3O60516 100 aaPredicted RBP9.36□□□□□ -0.91
VTI1B-204ENST00000554659 K7EQZ3 153 aa9.36□□□□□ -0.91
VTI1B-204ENST00000554659 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
VTI1B-204ENST00000554659 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
VTI1B-204ENST00000554659 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
VTI1B-204ENST00000554659 CSNK1G2-AS1Q8NCQ2 148 aa9.34□□□□□ -0.91
VTI1B-204ENST00000554659 DNAH10OSP0CZ25 163 aa9.34□□□□□ -0.91
VTI1B-204ENST00000554659 KCNQ1DNQ9H478 68 aa9.33□□□□□ -0.92
VTI1B-204ENST00000554659 CHD8Q9HCK8 2581 aa9.33□□□□□ -0.92
VTI1B-204ENST00000554659 A8MWP4 228 aa9.33□□□□□ -0.92
VTI1B-204ENST00000554659 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
VTI1B-204ENST00000554659 UQCR11O14957 56 aa9.32□□□□□ -0.92
VTI1B-204ENST00000554659 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
VTI1B-204ENST00000554659 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
VTI1B-204ENST00000554659 Q96NJ1 140 aa9.31□□□□□ -0.92
VTI1B-204ENST00000554659 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
VTI1B-204ENST00000554659 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
VTI1B-204ENST00000554659 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
VTI1B-204ENST00000554659 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
VTI1B-204ENST00000554659 RTL8CO15255 209 aa9.29□□□□□ -0.92
VTI1B-204ENST00000554659 LINC00336Q6ZUF6 198 aa9.28□□□□□ -0.92
VTI1B-204ENST00000554659 PRR34Q9NV39 138 aa9.28□□□□□ -0.92
VTI1B-204ENST00000554659 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
VTI1B-204ENST00000554659 BRCA2P51587 3418 aa9.28□□□□□ -0.92
VTI1B-204ENST00000554659 KRTAP24-1Q3LI83 254 aa9.26□□□□□ -0.93
VTI1B-204ENST00000554659 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
VTI1B-204ENST00000554659 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms