RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 H3BUT2 72 aa8.32□□□□□ -1.08
SHMT2-211ENST00000554310 APOMO95445 188 aa8.32□□□□□ -1.08
SHMT2-211ENST00000554310 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
SHMT2-211ENST00000554310 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
SHMT2-211ENST00000554310 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
SHMT2-211ENST00000554310 A0A1W2PPM0 123 aa8.31□□□□□ -1.08
SHMT2-211ENST00000554310 K7ERJ3 54 aa8.31□□□□□ -1.08
SHMT2-211ENST00000554310 NDUFA1O15239 70 aa8.31□□□□□ -1.08
SHMT2-211ENST00000554310 TIMM17BO60830 172 aa8.31□□□□□ -1.08
SHMT2-211ENST00000554310 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
SHMT2-211ENST00000554310 A0A087WYN8 130 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 RPL37AP61513 92 aaKnown RBP8.3□□□□□ -1.08
SHMT2-211ENST00000554310 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
SHMT2-211ENST00000554310 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 C5orf38Q86SI9 138 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 LITAFQ99732 161 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
SHMT2-211ENST00000554310 A0A096LNI7 61 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 GAGE10A6NGK3 116 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 K7EP34 96 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 FABP2P12104 132 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 CAMK2N2Q96S95 79 aa8.28□□□□□ -1.08
SHMT2-211ENST00000554310 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
SHMT2-211ENST00000554310 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
SHMT2-211ENST00000554310 F8WDY8 70 aa8.26□□□□□ -1.09
SHMT2-211ENST00000554310 Q6ZRU5 148 aa8.26□□□□□ -1.09
SHMT2-211ENST00000554310 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
SHMT2-211ENST00000554310 SPCS1Q9Y6A9 102 aa8.26□□□□□ -1.09
SHMT2-211ENST00000554310 A0A0B4J2C4 111 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 IFITM1P13164 125 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 HERV-K104P63124 156 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 C7orf33Q8WU49 177 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 HERC1Q15751 4861 aa8.25□□□□□ -1.09
SHMT2-211ENST00000554310 A0A087WZ39 114 aa8.24□□□□□ -1.09
SHMT2-211ENST00000554310 A4D1N5 150 aa8.24□□□□□ -1.09
SHMT2-211ENST00000554310 CFC1BP0CG36 223 aa8.24□□□□□ -1.09
SHMT2-211ENST00000554310 CFC1P0CG37 223 aa8.24□□□□□ -1.09
SHMT2-211ENST00000554310 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-211ENST00000554310 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SHMT2-211ENST00000554310 J3QL48 77 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
SHMT2-211ENST00000554310 TSPAN13O95857 204 aa8.22□□□□□ -1.09
SHMT2-211ENST00000554310 LYRM7Q5U5X0 104 aa8.21□□□□□ -1.1
SHMT2-211ENST00000554310 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
SHMT2-211ENST00000554310 COPS9Q8WXC6 57 aa8.21□□□□□ -1.1
SHMT2-211ENST00000554310 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
SHMT2-211ENST00000554310 PRSS2P07478 247 aa8.2□□□□□ -1.1
SHMT2-211ENST00000554310 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
SHMT2-211ENST00000554310 GAGE2BQ13066 116 aa8.2□□□□□ -1.1
SHMT2-211ENST00000554310 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-211ENST00000554310 OXTP01178 125 aa8.19□□□□□ -1.1
SHMT2-211ENST00000554310 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SHMT2-211ENST00000554310 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
SHMT2-211ENST00000554310 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
SHMT2-211ENST00000554310 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
SHMT2-211ENST00000554310 ERG28Q9UKR5 140 aa8.18□□□□□ -1.1
SHMT2-211ENST00000554310 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
SHMT2-211ENST00000554310 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
SHMT2-211ENST00000554310 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
SHMT2-211ENST00000554310 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
SHMT2-211ENST00000554310 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
SHMT2-211ENST00000554310 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
SHMT2-211ENST00000554310 Q8IZM0 81 aa8.16□□□□□ -1.1
SHMT2-211ENST00000554310 TOMM7Q9P0U1 55 aa8.16□□□□□ -1.1
SHMT2-211ENST00000554310 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
SHMT2-211ENST00000554310 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-211ENST00000554310 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
SHMT2-211ENST00000554310 LOC107984156A0A0G2JMH3 177 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 F8W1H4 67 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 NPC2P61916 151 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 Q6ZRP5 223 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 ARL17AQ8IVW1 177 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 DAND5Q8N907 189 aa8.14□□□□□ -1.11
SHMT2-211ENST00000554310 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
SHMT2-211ENST00000554310 CXCL5P42830 114 aa8.13□□□□□ -1.11
SHMT2-211ENST00000554310 CKS1BP61024 79 aa8.13□□□□□ -1.11
SHMT2-211ENST00000554310 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
SHMT2-211ENST00000554310 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
SHMT2-211ENST00000554310 H3BMG7 143 aa8.12□□□□□ -1.11
SHMT2-211ENST00000554310 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
SHMT2-211ENST00000554310 PSMB2P49721 201 aa8.11□□□□□ -1.11
SHMT2-211ENST00000554310 Q1RN00 199 aa8.11□□□□□ -1.11
SHMT2-211ENST00000554310 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms