RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 VPREB1P12018 145 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
LINC00517-202ENST00000554257 SERTAD4-AS1Q5TG53 156 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 TNXBP22105 4242 aa4.26□□□□□ -1.73
LINC00517-202ENST00000554257 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 A0A1W2PNN7 141 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 CKS1BP61024 79 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 SLC25A34Q6PIV7 304 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 DAND5Q8N907 189 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 HSBP1L1C9JCN9 74 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 CHTF8P0CG12 524 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 XGP55808 180 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 LINC00308Q8TCZ7 52 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 PLAC8Q9NZF1 115 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 UQCR10Q9UDW1 63 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
LINC00517-202ENST00000554257 A0A1B0GWB2 263 aa4.24□□□□□ -1.73
LINC00517-202ENST00000554257 Q6ZVH6 145 aa4.24□□□□□ -1.73
LINC00517-202ENST00000554257 GCSHP23434 173 aa4.23□□□□□ -1.73
LINC00517-202ENST00000554257 TAL2Q16559 108 aa4.23□□□□□ -1.73
LINC00517-202ENST00000554257 NDUFC2O95298 119 aa4.23□□□□□ -1.73
LINC00517-202ENST00000554257 MUSTN1Q8IVN3 82 aa4.23□□□□□ -1.73
LINC00517-202ENST00000554257 PFN2P35080 140 aa4.22□□□□□ -1.73
LINC00517-202ENST00000554257 CEND1Q8N111 149 aa4.22□□□□□ -1.73
LINC00517-202ENST00000554257 TMEM238C9JI98 176 aa4.22□□□□□ -1.73
LINC00517-202ENST00000554257 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
LINC00517-202ENST00000554257 KRTAP4-16G5E9R7 235 aaPredicted RBP4.22□□□□□ -1.73
LINC00517-202ENST00000554257 IFITM1P13164 125 aa4.22□□□□□ -1.73
LINC00517-202ENST00000554257 FXYD2P54710 66 aa4.22□□□□□ -1.73
LINC00517-202ENST00000554257 DDTP30046 118 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 XAGE1AQ9HD64 81 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 LINC00587B1AMM8 73 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
LINC00517-202ENST00000554257 PRR3P79522 188 aaKnown RBP4.2□□□□□ -1.74
LINC00517-202ENST00000554257 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
LINC00517-202ENST00000554257 CIRBP-AS1Q8TBR5 109 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 ABCA13Q86UQ4 5058 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 CFC1P0CG37 223 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 HSD52Q0P140 79 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 MEIG1Q5JSS6 88 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 SCXQ7RTU7 201 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 A0A0U1RRA0 63 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 EREGO14944 169 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 SPRR1AP35321 89 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 LINC00158P58513 81 aa4.2□□□□□ -1.74
LINC00517-202ENST00000554257 A0A087WYN8 130 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 GAGE2EQ4V326 116 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 GAGE2DQ9UEU5 116 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 A4D1N5 150 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 NPC2P61916 151 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 C22orf24Q9Y442 160 aa4.19□□□□□ -1.74
LINC00517-202ENST00000554257 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 TSTD3H0UI37 97 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 CDK2AP2O75956 126 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 C7orf33Q8WU49 177 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 LINC00474Q9P2X8 69 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 HNRNPA3P51991 378 aaKnown RBP4.18□□□□□ -1.74
LINC00517-202ENST00000554257 PKIGQ9Y2B9 76 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
LINC00517-202ENST00000554257 SNHG12Q9BXW3 62 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
LINC00517-202ENST00000554257 SRRM2Q9UQ35 2752 aaKnown RBP4.17□□□□□ -1.74
LINC00517-202ENST00000554257 LINC00167Q96N53 147 aa4.17□□□□□ -1.74
LINC00517-202ENST00000554257 IGKV2-24A0A0C4DH68 120 aa4.17□□□□□ -1.74
LINC00517-202ENST00000554257 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
LINC00517-202ENST00000554257 MRPL55Q7Z7F7 128 aaKnown RBP4.16□□□□□ -1.74
LINC00517-202ENST00000554257 NCR3O14931 201 aa4.16□□□□□ -1.74
LINC00517-202ENST00000554257 HAMPP81172 84 aa4.16□□□□□ -1.74
LINC00517-202ENST00000554257 FAM19A5Q7Z5A7 132 aaPredicted RBP4.16□□□□□ -1.74
LINC00517-202ENST00000554257 M0R378 163 aa4.16□□□□□ -1.74
LINC00517-202ENST00000554257 M0QXV9 152 aa4.15□□□□□ -1.74
LINC00517-202ENST00000554257 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
LINC00517-202ENST00000554257 K7ERJ3 54 aa4.15□□□□□ -1.75
LINC00517-202ENST00000554257 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
LINC00517-202ENST00000554257 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.75
LINC00517-202ENST00000554257 HINT1P49773 126 aaPredicted RBP4.14□□□□□ -1.75
LINC00517-202ENST00000554257 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC00517-202ENST00000554257 TAX1BP3O14907 124 aa4.14□□□□□ -1.75
LINC00517-202ENST00000554257 PRYO14603 147 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 TSPAN13O95857 204 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
LINC00517-202ENST00000554257 B5MCH6 92 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 COPS9Q8WXC6 57 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
LINC00517-202ENST00000554257 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 Q9BRP9 147 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 TRBV7-6A0A0J9YX20 115 aa4.12□□□□□ -1.75
LINC00517-202ENST00000554257 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms