RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 COX7B2Q8TF08 81 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 DIRC1Q969H9 104 aa4.03□□□□□ -1.76
SLIRP-203ENST00000554074 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 C5orf52A6NGY3 159 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 LINC00587B1AMM8 73 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 SNRPEP62304 92 aaKnown RBP4.02□□□□□ -1.77
SLIRP-203ENST00000554074 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 PLEKHB2Q96CS7 222 aa4.02□□□□□ -1.77
SLIRP-203ENST00000554074 H0Y8G0 127 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 H0Y9J4 135 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 SPINK8P0C7L1 97 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 C3orf79P0CE67 100 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 NMUP48645 174 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 HERV-K104P63124 156 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 COX17Q14061 63 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 GAGE2EQ4V326 116 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 FAM19A5Q7Z5A7 132 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-203ENST00000554074 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 TOMM7Q9P0U1 55 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 GAGE2DQ9UEU5 116 aa4.01□□□□□ -1.77
SLIRP-203ENST00000554074 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 M0QXV9 152 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 LEPROTO15243 131 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 KRTDAPP60985 99 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 C9orf129Q5T035 196 aaKnown RBP4□□□□□ -1.77
SLIRP-203ENST00000554074 C2orf82Q6UX34 121 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
SLIRP-203ENST00000554074 MYMXA0A1B0GTQ4 84 aa3.99□□□□□ -1.77
SLIRP-203ENST00000554074 E9PLD3 99 aa3.99□□□□□ -1.77
SLIRP-203ENST00000554074 KRTAP1-4P0C5Y4 121 aa3.99□□□□□ -1.77
SLIRP-203ENST00000554074 UBE2BP63146 152 aa3.99□□□□□ -1.77
SLIRP-203ENST00000554074 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
SLIRP-203ENST00000554074 J3QQQ9 107 aa3.98□□□□□ -1.77
SLIRP-203ENST00000554074 RPL13AP40429 203 aaKnown RBP3.98□□□□□ -1.77
SLIRP-203ENST00000554074 LBHQ53QV2 105 aaPredicted RBP3.98□□□□□ -1.77
SLIRP-203ENST00000554074 PRR26Q8N8Z3 221 aa3.98□□□□□ -1.77
SLIRP-203ENST00000554074 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
SLIRP-203ENST00000554074 ZNF861PO60384 105 aa3.97□□□□□ -1.77
SLIRP-203ENST00000554074 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
SLIRP-203ENST00000554074 NDUFA12Q9UI09 145 aa3.97□□□□□ -1.77
SLIRP-203ENST00000554074 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
SLIRP-203ENST00000554074 PMCHL2Q9BQD1 86 aa3.96□□□□□ -1.78
SLIRP-203ENST00000554074 ERG28Q9UKR5 140 aa3.96□□□□□ -1.78
SLIRP-203ENST00000554074 C22orf24Q9Y442 160 aa3.96□□□□□ -1.78
SLIRP-203ENST00000554074 TIMM17BO60830 172 aa3.95□□□□□ -1.78
SLIRP-203ENST00000554074 MRPL55Q7Z7F7 128 aaKnown RBP3.95□□□□□ -1.78
SLIRP-203ENST00000554074 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
SLIRP-203ENST00000554074 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SLIRP-203ENST00000554074 XAGE1AQ9HD64 81 aa3.95□□□□□ -1.78
SLIRP-203ENST00000554074 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 LOC107984156A0A0G2JMH3 177 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 BCE1O60756 84 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 SCGB1D1O95968 90 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
SLIRP-203ENST00000554074 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
SLIRP-203ENST00000554074 JOSD1Q15040 202 aaPredicted RBP3.94□□□□□ -1.78
SLIRP-203ENST00000554074 MEIG1Q5JSS6 88 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 ARL17AQ8IVW1 177 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 PPDPFQ9H3Y8 114 aa3.94□□□□□ -1.78
SLIRP-203ENST00000554074 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
SLIRP-203ENST00000554074 PFN2P35080 140 aa3.93□□□□□ -1.78
SLIRP-203ENST00000554074 LINC00158P58513 81 aa3.93□□□□□ -1.78
SLIRP-203ENST00000554074 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
SLIRP-203ENST00000554074 Q6ZVH6 145 aa3.93□□□□□ -1.78
SLIRP-203ENST00000554074 ZNF815PA8K554 130 aa3.92□□□□□ -1.78
SLIRP-203ENST00000554074 LINC00167Q96N53 147 aa3.92□□□□□ -1.78
SLIRP-203ENST00000554074 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
SLIRP-203ENST00000554074 SND1-IT1Q9HBX3 110 aa3.92□□□□□ -1.78
SLIRP-203ENST00000554074 TMA7Q9Y2S6 64 aaKnown RBP3.92□□□□□ -1.78
SLIRP-203ENST00000554074 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 TMEM238C9JI98 176 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 DLEU1O43261 78 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 SMIM13P0DJ93 91 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 CRYGAP11844 174 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 IFITM1P13164 125 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 ANKRD39Q53RE8 183 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 ATOH7Q8N100 152 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 MIEN1Q9BRT3 115 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 CBY1Q9Y3M2 126 aa3.91□□□□□ -1.78
SLIRP-203ENST00000554074 A0A087X002 238 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 RPL37AP8A6NKH3 93 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 NDUFC2O95298 119 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 FAM229BQ4G0N7 80 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 SCGB1D4Q6XE38 83 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 BOD1L2Q8IYS8 172 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 MIR7-3HGQ8N6C7 128 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 SPANXDQ9BXN6 97 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 SPANXCQ9NY87 97 aa3.9□□□□□ -1.79
SLIRP-203ENST00000554074 LPAP08519 4548 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 M0R378 163 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 COX8AP10176 69 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 VPREB1P12018 145 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 CTAG1AP78358 180 aa3.89□□□□□ -1.79
SLIRP-203ENST00000554074 S100A12P80511 92 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms