RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TMEM126AQ9H061 195 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
ATXN3-224ENST00000554040 LINC00862A6NCI5 91 aa3.68□□□□□ -1.82
ATXN3-224ENST00000554040 M0R378 163 aa3.68□□□□□ -1.82
ATXN3-224ENST00000554040 IFI27P40305 119 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-224ENST00000554040 MRPL51Q4U2R6 128 aaKnown RBP3.68□□□□□ -1.82
ATXN3-224ENST00000554040 TMEM141Q96I45 108 aa3.68□□□□□ -1.82
ATXN3-224ENST00000554040 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
ATXN3-224ENST00000554040 NEBP20929 6669 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 CXCL5P42830 114 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 RIGQ13278 110 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 TEX43Q6ZNM6 134 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 SMIM2Q9BVW6 85 aa3.67□□□□□ -1.82
ATXN3-224ENST00000554040 EIF5A2Q9GZV4 153 aaKnown RBP3.67□□□□□ -1.82
ATXN3-224ENST00000554040 CKS2P33552 79 aa3.66□□□□□ -1.82
ATXN3-224ENST00000554040 ZC2HC1BQ5TFG8 222 aa3.66□□□□□ -1.82
ATXN3-224ENST00000554040 C2orf88Q9BSF0 95 aa3.66□□□□□ -1.82
ATXN3-224ENST00000554040 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
ATXN3-224ENST00000554040 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-224ENST00000554040 RAB5BP61020 215 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 ZNF345Q14585 488 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 AMELXQ99217 191 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 VCX2Q9H322 139 aa3.65□□□□□ -1.83
ATXN3-224ENST00000554040 KANTRA0A1W2PQU2 76 aa3.64□□□□□ -1.83
ATXN3-224ENST00000554040 RAB5AP20339 215 aa3.64□□□□□ -1.83
ATXN3-224ENST00000554040 TAGLN2P37802 199 aaKnown RBP3.64□□□□□ -1.83
ATXN3-224ENST00000554040 LINC01551Q86U37 167 aa3.64□□□□□ -1.83
ATXN3-224ENST00000554040 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
ATXN3-224ENST00000554040 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
ATXN3-224ENST00000554040 SMLR1H3BR10 107 aa3.63□□□□□ -1.83
ATXN3-224ENST00000554040 HERVK_113P63121 156 aa3.63□□□□□ -1.83
ATXN3-224ENST00000554040 SEC11AP67812 179 aa3.63□□□□□ -1.83
ATXN3-224ENST00000554040 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
ATXN3-224ENST00000554040 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 HMSDA8MTL9 139 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 D6R8Y8 96 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 NPYP01303 97 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 RPL24P83731 157 aaKnown RBP3.62□□□□□ -1.83
ATXN3-224ENST00000554040 MOBPQ13875 183 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 SMCR5Q8TEV8 140 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 OSTCQ9NRP0 149 aa3.62□□□□□ -1.83
ATXN3-224ENST00000554040 IGLV9-49A0A0B4J1Y8 123 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 TMEM250H0YL14 139 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 PDZD11Q5EBL8 140 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 NAT8BQ9UHF3 227 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 V9GYV3 84 aa3.61□□□□□ -1.83
ATXN3-224ENST00000554040 A0A1B0GW15 77 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 PPBPP02775 128 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 FAM74A3Q4VXF1 159 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 SND1-IT1Q9HBX3 110 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 CYSLTR1Q9Y271 337 aa3.6□□□□□ -1.83
ATXN3-224ENST00000554040 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
ATXN3-224ENST00000554040 PFN2P35080 140 aa3.59□□□□□ -1.83
ATXN3-224ENST00000554040 RAB14P61106 215 aa3.59□□□□□ -1.83
ATXN3-224ENST00000554040 AKAP14Q86UN6 197 aa3.59□□□□□ -1.83
ATXN3-224ENST00000554040 Q8NDZ9 215 aa3.59□□□□□ -1.83
ATXN3-224ENST00000554040 LOC389332A0A1B0GUA5 103 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 F8W036 122 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 ATP5LO75964 103 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 CEBPGP53567 150 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 TMEM136Q6ZRR5 245 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 ORMDL3Q8N138 153 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
ATXN3-224ENST00000554040 IGLV5-45A0A087WSX0 123 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 SMIM27A0A1W2PRY6 76 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 IGLV6-57P01721 117 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 SPRR1AP35321 89 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
ATXN3-224ENST00000554040 Q6Q795 121 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 SMIM7Q9BQ49 75 aa3.57□□□□□ -1.84
ATXN3-224ENST00000554040 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 S100A8P05109 93 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 COX17Q14061 63 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 ORMDL2Q53FV1 153 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 Q8N8P6 123 aa3.56□□□□□ -1.84
ATXN3-224ENST00000554040 A0A1B0GXF2 115 aa3.55□□□□□ -1.84
ATXN3-224ENST00000554040 ERC2-IT1O76042 136 aa3.55□□□□□ -1.84
ATXN3-224ENST00000554040 MRPL54Q6P161 138 aaKnown RBP3.55□□□□□ -1.84
ATXN3-224ENST00000554040 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
ATXN3-224ENST00000554040 MAP1LC3AQ9H492 121 aa3.55□□□□□ -1.84
ATXN3-224ENST00000554040 ERG28Q9UKR5 140 aa3.55□□□□□ -1.84
ATXN3-224ENST00000554040 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
ATXN3-224ENST00000554040 MT2AP02795 61 aa3.54□□□□□ -1.84
ATXN3-224ENST00000554040 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
ATXN3-224ENST00000554040 BATF3Q9NR55 127 aa3.54□□□□□ -1.84
ATXN3-224ENST00000554040 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
ATXN3-224ENST00000554040 K7EMI3 77 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms