RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	C9orf116	Q5BN46	136 aa	Predicted RBP	6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	C6orf223	Q8N319	242 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889		Q8N814	137 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	C11orf45	Q8TAV5	145 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	TM2D3	Q9BRN9	247 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	RETN	Q9HD89	108 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	C6orf48	Q9UBA6	75 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	TRRAP	Q9Y4A5	3859 aa		6.16	□□□□□ -1.42
PRKCH-209	ENST00000553889	DEFB131B	A0A096LNP1	70 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889	TRAV10	A0A0B4J240	114 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889	TMEM256-PLSCR3	K7ERE1	68 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889	LINC00575	Q6W349	94 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889		Q8NDZ9	215 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889		Q9HAA7	133 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889	STAB1	Q9NY15	2570 aa		6.15	□□□□□ -1.42
PRKCH-209	ENST00000553889	DNAH3	Q8TD57	4116 aa		6.15	□□□□□ -1.43
PRKCH-209	ENST00000553889	C15orf56	Q8N910	161 aa		6.14	□□□□□ -1.43
PRKCH-209	ENST00000553889	MAST4	O15021	2626 aa		6.14	□□□□□ -1.43
PRKCH-209	ENST00000553889	NDUFC2-KCTD14	E9PQ53	114 aa		6.13	□□□□□ -1.43
PRKCH-209	ENST00000553889	ZNF561-AS1	K7EIQ3	104 aa		6.13	□□□□□ -1.43
PRKCH-209	ENST00000553889	GHRH	P01286	108 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	TLX1NB	P0CAT3	122 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	VPREB1	P12018	145 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	PRR3	P79522	188 aa	Known RBP	6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	S100A7L2	Q5SY68	101 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	C1orf43	Q9BWL3	253 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889	PLA2G2D	Q9UNK4	145 aa		6.12	□□□□□ -1.43
PRKCH-209	ENST00000553889		M0R378	163 aa		6.11	□□□□□ -1.43
PRKCH-209	ENST00000553889	NDUFV3	P56181	108 aa	Known RBP	6.11	□□□□□ -1.43
PRKCH-209	ENST00000553889	C6orf99	Q4VX62	202 aa		6.11	□□□□□ -1.43
PRKCH-209	ENST00000553889	CAMK2N2	Q96S95	79 aa		6.11	□□□□□ -1.43
PRKCH-209	ENST00000553889	UPK3B	Q9BT76	320 aa		6.11	□□□□□ -1.43
PRKCH-209	ENST00000553889	hADV29S1	A0JD25	119 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	CCK	P06307	115 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	NHLRC4	P0CG21	123 aa	Predicted RBP	6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	PDE6G	P18545	87 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	TTC32	Q5I0X7	151 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	SMCR5	Q8TEV8	140 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	TENM3	Q9P273	2699 aa		6.1	□□□□□ -1.43
PRKCH-209	ENST00000553889	LOC110117498	A0A087WWA1	95 aa		6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889	TRBV10-3	A0A0K0K1G6	114 aa		6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889	NCR3	O14931	201 aa		6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889	C9orf129	Q5T035	196 aa	Known RBP	6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889		Q6ZRU5	148 aa		6.09	□□□□□ -1.43
PRKCH-209	ENST00000553889	IGLV5-37	A0A075B6J1	123 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	TRAV23DV6	A0A075B6W5	121 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889		K7EIL1	84 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	ELOF1	P60002	83 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	RPL18A	Q02543	176 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	SYCN	Q0VAF6	134 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889		Q6JHZ5	121 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	GAGE2A	Q6NT46	116 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	DIRC1	Q969H9	104 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	RMI2	Q96E14	147 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	LINC00526	Q96FQ7	95 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	ANAPC13	Q9BS18	74 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	C14orf132	Q9NPU4	83 aa		6.08	□□□□□ -1.44
PRKCH-209	ENST00000553889	COL6A5	A8TX70	2615 aa		6.07	□□□□□ -1.44
PRKCH-209	ENST00000553889	ZNF73	O43830	326 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKCH-209	ENST00000553889	SLPI	P03973	132 aa		6.07	□□□□□ -1.44
PRKCH-209	ENST00000553889	CMYA5	Q8N3K9	4069 aa		6.07	□□□□□ -1.44
PRKCH-209	ENST00000553889	FBN1	P35555	2871 aa	Known RBP	6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	HIGD2B	Q4VC39	106 aa		6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	ATP5EP2	Q5VTU8	51 aa		6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	XAGE1A	Q9HD64	81 aa		6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	LINC00588	Q9Y4M8	146 aa		6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	PKD1L1	Q8TDX9	2849 aa		6.06	□□□□□ -1.44
PRKCH-209	ENST00000553889	BAHCC1	Q9P281	2608 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	NOTCH1	P46531	2555 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	IGKV2D-24	A0A075B6R9	120 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	COX7B	P24311	80 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	HIST1H4A	P62805	103 aa	Known RBP	6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	MRAP	Q8TCY5	172 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	KCNQ1DN	Q9H478	68 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	LINC00846	Q9NV44	126 aa		6.05	□□□□□ -1.44
PRKCH-209	ENST00000553889	RBM3	P98179	157 aa	Known RBP	6.04	□□□□□ -1.44
PRKCH-209	ENST00000553889		Q6ZRP5	223 aa		6.04	□□□□□ -1.44
PRKCH-209	ENST00000553889	LINC00528	Q8N1L1	170 aa		6.04	□□□□□ -1.44
PRKCH-209	ENST00000553889	NBEAL1	Q6ZS30	2694 aa		6.03	□□□□□ -1.44
PRKCH-209	ENST00000553889		Q6ZQT0	140 aa		6.03	□□□□□ -1.44
PRKCH-209	ENST00000553889	TRBV7-4	A0A0J9YYF1	115 aa		6.02	□□□□□ -1.45
PRKCH-209	ENST00000553889		Q6ZQY7	126 aa		6.02	□□□□□ -1.45
PRKCH-209	ENST00000553889	USP17L23	D6RBM5	183 aa		6	□□□□□ -1.45
PRKCH-209	ENST00000553889	SPRR1A	P35321	89 aa		6	□□□□□ -1.45
PRKCH-209	ENST00000553889	MGAM2	Q2M2H8	2515 aa		6	□□□□□ -1.45
PRKCH-209	ENST00000553889	FAM236A	A0A1B0GUQ0	79 aa		5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889	FAM236B	A0A1B0GV22	79 aa		5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889		A0A1B0GW54	56 aa		5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889	PRY	O14603	147 aa		5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889	BCE1	O60756	84 aa		5.99	□□□□□ -1.45
PRKCH-209	ENST00000553889	ANK2	Q01484	3957 aa		5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	ATOX1	O00244	68 aa		5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	CNBP	P62633	177 aa	Known RBP	5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	NKAPP1	Q8N9T2	125 aa		5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	C7orf33	Q8WU49	177 aa		5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	DSCR8	Q96T75	97 aa		5.98	□□□□□ -1.45
PRKCH-209	ENST00000553889	UBL5	Q9BZL1	73 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms