RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MACF1Q9UPN3 7388 aaKnown RBP7.37□□□□□ -1.23
PRPF39-204ENST00000553605 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
PRPF39-204ENST00000553605 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
PRPF39-204ENST00000553605 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
PRPF39-204ENST00000553605 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
PRPF39-204ENST00000553605 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
PRPF39-204ENST00000553605 A0A1B0GXF2 115 aa7.35□□□□□ -1.23
PRPF39-204ENST00000553605 Q8N8P6 123 aa7.35□□□□□ -1.23
PRPF39-204ENST00000553605 IGLV5-45A0A087WSX0 123 aa7.34□□□□□ -1.23
PRPF39-204ENST00000553605 TINCRA0A1B0GVN0 87 aa7.34□□□□□ -1.23
PRPF39-204ENST00000553605 TIMM17AQ99595 171 aa7.33□□□□□ -1.24
PRPF39-204ENST00000553605 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
PRPF39-204ENST00000553605 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
PRPF39-204ENST00000553605 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
PRPF39-204ENST00000553605 COX17Q14061 63 aa7.32□□□□□ -1.24
PRPF39-204ENST00000553605 SLC51BQ86UW2 128 aa7.32□□□□□ -1.24
PRPF39-204ENST00000553605 LAMTOR2Q9Y2Q5 125 aa7.32□□□□□ -1.24
PRPF39-204ENST00000553605 K7EMI3 77 aa7.31□□□□□ -1.24
PRPF39-204ENST00000553605 PRYO14603 147 aa7.31□□□□□ -1.24
PRPF39-204ENST00000553605 IGLV6-57P01721 117 aa7.31□□□□□ -1.24
PRPF39-204ENST00000553605 BLOC1S1P78537 153 aa7.31□□□□□ -1.24
PRPF39-204ENST00000553605 ETDCA0A1B0GVM5 59 aa7.3□□□□□ -1.24
PRPF39-204ENST00000553605 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
PRPF39-204ENST00000553605 SPRR1AP35321 89 aa7.3□□□□□ -1.24
PRPF39-204ENST00000553605 ADIRFQ15847 76 aa7.3□□□□□ -1.24
PRPF39-204ENST00000553605 G0S2P27469 103 aa7.29□□□□□ -1.24
PRPF39-204ENST00000553605 RGS21Q2M5E4 152 aa7.28□□□□□ -1.24
PRPF39-204ENST00000553605 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
PRPF39-204ENST00000553605 TOMM6Q96B49 74 aa7.28□□□□□ -1.24
PRPF39-204ENST00000553605 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
PRPF39-204ENST00000553605 MRPL18Q9H0U6 180 aaKnown RBP7.28□□□□□ -1.24
PRPF39-204ENST00000553605 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
PRPF39-204ENST00000553605 Q6Q795 121 aa7.27□□□□□ -1.25
PRPF39-204ENST00000553605 ERASQ7Z444 233 aa7.27□□□□□ -1.25
PRPF39-204ENST00000553605 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
PRPF39-204ENST00000553605 H3BRM9 83 aa7.26□□□□□ -1.25
PRPF39-204ENST00000553605 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
PRPF39-204ENST00000553605 SCGB3A1Q96QR1 104 aa7.26□□□□□ -1.25
PRPF39-204ENST00000553605 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
PRPF39-204ENST00000553605 LIMD2Q9BT23 127 aa7.25□□□□□ -1.25
PRPF39-204ENST00000553605 CST9LQ9H4G1 147 aa7.25□□□□□ -1.25
PRPF39-204ENST00000553605 NXT2Q9NPJ8 142 aaKnown RBP7.25□□□□□ -1.25
PRPF39-204ENST00000553605 IGLV5-39A0A0G2JS06 123 aa7.24□□□□□ -1.25
PRPF39-204ENST00000553605 ADCYAP1P18509 176 aa7.24□□□□□ -1.25
PRPF39-204ENST00000553605 NAT8Q9UHE5 227 aa7.24□□□□□ -1.25
PRPF39-204ENST00000553605 B5MCH6 92 aa7.23□□□□□ -1.25
PRPF39-204ENST00000553605 ALKAL2Q6UX46 152 aa7.23□□□□□ -1.25
PRPF39-204ENST00000553605 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
PRPF39-204ENST00000553605 LINC00158P58513 81 aa7.21□□□□□ -1.26
PRPF39-204ENST00000553605 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.26
PRPF39-204ENST00000553605 NCR3O14931 201 aa7.2□□□□□ -1.26
PRPF39-204ENST00000553605 PMVKQ15126 192 aa7.2□□□□□ -1.26
PRPF39-204ENST00000553605 Q9BRP9 147 aa7.2□□□□□ -1.26
PRPF39-204ENST00000553605 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
PRPF39-204ENST00000553605 A0A0U1RRA0 63 aa7.18□□□□□ -1.26
PRPF39-204ENST00000553605 S100A12P80511 92 aa7.18□□□□□ -1.26
PRPF39-204ENST00000553605 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
PRPF39-204ENST00000553605 BOD1L2Q8IYS8 172 aa7.18□□□□□ -1.26
PRPF39-204ENST00000553605 LINC00846Q9NV44 126 aa7.18□□□□□ -1.26
PRPF39-204ENST00000553605 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
PRPF39-204ENST00000553605 LINC01549A6NIU2 74 aa7.15□□□□□ -1.26
PRPF39-204ENST00000553605 C9JQL5 133 aa7.15□□□□□ -1.26
PRPF39-204ENST00000553605 MT2AP02795 61 aa7.15□□□□□ -1.26
PRPF39-204ENST00000553605 IGLC3P0DOY3 106 aa7.15□□□□□ -1.26
PRPF39-204ENST00000553605 ZNF22P17026 224 aaPredicted RBP7.15□□□□□ -1.26
PRPF39-204ENST00000553605 Q6ZRX8 168 aa7.15□□□□□ -1.26
PRPF39-204ENST00000553605 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
PRPF39-204ENST00000553605 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
PRPF39-204ENST00000553605 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
PRPF39-204ENST00000553605 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
PRPF39-204ENST00000553605 ST20-AS1Q8NBB2 130 aa7.11□□□□□ -1.27
PRPF39-204ENST00000553605 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
PRPF39-204ENST00000553605 NDUFA6P56556 154 aa7.1□□□□□ -1.27
PRPF39-204ENST00000553605 A6NJY4 79 aa7.09□□□□□ -1.27
PRPF39-204ENST00000553605 MT1FP04733 61 aa7.09□□□□□ -1.27
PRPF39-204ENST00000553605 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
PRPF39-204ENST00000553605 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
PRPF39-204ENST00000553605 CHTOPQ9Y3Y2 248 aaKnown RBP7.09□□□□□ -1.27
PRPF39-204ENST00000553605 C20orf202A1L168 122 aa7.08□□□□□ -1.28
PRPF39-204ENST00000553605 DDTP30046 118 aa7.08□□□□□ -1.28
PRPF39-204ENST00000553605 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
PRPF39-204ENST00000553605 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
PRPF39-204ENST00000553605 LINC01546A6NGU7 62 aa7.07□□□□□ -1.28
PRPF39-204ENST00000553605 H7C2G1 150 aa7.07□□□□□ -1.28
PRPF39-204ENST00000553605 CD164Q04900 197 aa7.07□□□□□ -1.28
PRPF39-204ENST00000553605 PEA15Q15121 130 aa7.07□□□□□ -1.28
PRPF39-204ENST00000553605 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
PRPF39-204ENST00000553605 C5orf52A6NGY3 159 aa7.06□□□□□ -1.28
PRPF39-204ENST00000553605 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
PRPF39-204ENST00000553605 MEIG1Q5JSS6 88 aa7.05□□□□□ -1.28
PRPF39-204ENST00000553605 Q5XG85 94 aa7.05□□□□□ -1.28
PRPF39-204ENST00000553605 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
PRPF39-204ENST00000553605 C11orf86A6NJI1 115 aa7.04□□□□□ -1.28
PRPF39-204ENST00000553605 SPRR1BP22528 89 aa7.04□□□□□ -1.28
PRPF39-204ENST00000553605 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
PRPF39-204ENST00000553605 FA2HQ7L5A8 372 aa7.04□□□□□ -1.28
PRPF39-204ENST00000553605 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
PRPF39-204ENST00000553605 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
PRPF39-204ENST00000553605 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
PRPF39-204ENST00000553605 PRO1933Q9H354 126 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms