RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 LEPROTO15243 131 aa11.32□□□□□ -0.6
CPSF2-202ENST00000553427 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
CPSF2-202ENST00000553427 PMCHL2Q9BQD1 86 aa11.32□□□□□ -0.6
CPSF2-202ENST00000553427 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
CPSF2-202ENST00000553427 IGLV7-43P04211 117 aa11.31□□□□□ -0.6
CPSF2-202ENST00000553427 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
CPSF2-202ENST00000553427 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
CPSF2-202ENST00000553427 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
CPSF2-202ENST00000553427 TNXBP22105 4242 aa11.3□□□□□ -0.6
CPSF2-202ENST00000553427 MYMXA0A1B0GTQ4 84 aa11.29□□□□□ -0.6
CPSF2-202ENST00000553427 LINC00587B1AMM8 73 aa11.29□□□□□ -0.6
CPSF2-202ENST00000553427 J3QQQ9 107 aa11.28□□□□□ -0.6
CPSF2-202ENST00000553427 NMUP48645 174 aa11.28□□□□□ -0.6
CPSF2-202ENST00000553427 LINC00158P58513 81 aa11.28□□□□□ -0.6
CPSF2-202ENST00000553427 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
CPSF2-202ENST00000553427 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
CPSF2-202ENST00000553427 VPREB1P12018 145 aa11.27□□□□□ -0.61
CPSF2-202ENST00000553427 RPL24P83731 157 aaKnown RBP11.27□□□□□ -0.61
CPSF2-202ENST00000553427 LINC00167Q96N53 147 aa11.27□□□□□ -0.61
CPSF2-202ENST00000553427 MT1HL1P0DM35 61 aa11.26□□□□□ -0.61
CPSF2-202ENST00000553427 E9PLD3 99 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CPSF2-202ENST00000553427 LGALS3P17931 250 aaKnown RBP11.23□□□□□ -0.61
CPSF2-202ENST00000553427 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CPSF2-202ENST00000553427 Q8NDZ9 215 aa11.22□□□□□ -0.61
CPSF2-202ENST00000553427 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
CPSF2-202ENST00000553427 GAGE10A6NGK3 116 aa11.21□□□□□ -0.61
CPSF2-202ENST00000553427 H0Y9J4 135 aa11.21□□□□□ -0.61
CPSF2-202ENST00000553427 BCE1O60756 84 aa11.21□□□□□ -0.61
CPSF2-202ENST00000553427 KRTDAPP60985 99 aa11.21□□□□□ -0.61
CPSF2-202ENST00000553427 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
CPSF2-202ENST00000553427 LOC107984156A0A0G2JMH3 177 aa11.19□□□□□ -0.62
CPSF2-202ENST00000553427 C20orf202A1L168 122 aa11.19□□□□□ -0.62
CPSF2-202ENST00000553427 ZNF861PO60384 105 aa11.19□□□□□ -0.62
CPSF2-202ENST00000553427 ARL17AQ8IVW1 177 aa11.19□□□□□ -0.62
CPSF2-202ENST00000553427 IGLV1-50A0A075B6I6 118 aa11.18□□□□□ -0.62
CPSF2-202ENST00000553427 AKR1D1P51857 326 aa11.18□□□□□ -0.62
CPSF2-202ENST00000553427 BOD1L2Q8IYS8 172 aa11.17□□□□□ -0.62
CPSF2-202ENST00000553427 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
CPSF2-202ENST00000553427 IGKV2-28A0A075B6P5 120 aa11.16□□□□□ -0.62
CPSF2-202ENST00000553427 M0R378 163 aa11.16□□□□□ -0.62
CPSF2-202ENST00000553427 IGKV2D-28P01615 120 aa11.16□□□□□ -0.62
CPSF2-202ENST00000553427 RPL28P46779 137 aaKnown RBP11.16□□□□□ -0.62
CPSF2-202ENST00000553427 IGKV2D-26A0A0A0MRZ7 120 aa11.15□□□□□ -0.62
CPSF2-202ENST00000553427 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
CPSF2-202ENST00000553427 KRTAP10-8P60410 259 aa11.15□□□□□ -0.62
CPSF2-202ENST00000553427 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
CPSF2-202ENST00000553427 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
CPSF2-202ENST00000553427 HIST1H2BLQ99880 126 aa11.14□□□□□ -0.63
CPSF2-202ENST00000553427 S100A6P06703 90 aa11.12□□□□□ -0.63
CPSF2-202ENST00000553427 KRTAP1-4P0C5Y4 121 aa11.12□□□□□ -0.63
CPSF2-202ENST00000553427 S100A2P29034 98 aa11.12□□□□□ -0.63
CPSF2-202ENST00000553427 DAND5Q8N907 189 aa11.12□□□□□ -0.63
CPSF2-202ENST00000553427 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
CPSF2-202ENST00000553427 TIMM17BO60830 172 aa11.11□□□□□ -0.63
CPSF2-202ENST00000553427 TRBV10-2A0A0K0K1G8 114 aa11.1□□□□□ -0.63
CPSF2-202ENST00000553427 MIEN1Q9BRT3 115 aa11.1□□□□□ -0.63
CPSF2-202ENST00000553427 ZNF815PA8K554 130 aa11.09□□□□□ -0.63
CPSF2-202ENST00000553427 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
CPSF2-202ENST00000553427 NDUFC2O95298 119 aa11.09□□□□□ -0.63
CPSF2-202ENST00000553427 UBE2AP49459 152 aa11.09□□□□□ -0.63
CPSF2-202ENST00000553427 LITAFQ99732 161 aa11.09□□□□□ -0.63
CPSF2-202ENST00000553427 PRYO14603 147 aa11.08□□□□□ -0.64
CPSF2-202ENST00000553427 NCR3O14931 201 aa11.08□□□□□ -0.64
CPSF2-202ENST00000553427 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
CPSF2-202ENST00000553427 SPANXB1Q9NS25 103 aaPredicted RBP11.08□□□□□ -0.64
CPSF2-202ENST00000553427 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
CPSF2-202ENST00000553427 KCNQ1DNQ9H478 68 aa11.07□□□□□ -0.64
CPSF2-202ENST00000553427 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
CPSF2-202ENST00000553427 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
CPSF2-202ENST00000553427 SPRR1AP35321 89 aa11.05□□□□□ -0.64
CPSF2-202ENST00000553427 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
CPSF2-202ENST00000553427 FAM19A1Q7Z5A9 133 aa11.05□□□□□ -0.64
CPSF2-202ENST00000553427 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
CPSF2-202ENST00000553427 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
CPSF2-202ENST00000553427 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
CPSF2-202ENST00000553427 TRBV10-3A0A0K0K1G6 114 aa11.03□□□□□ -0.64
CPSF2-202ENST00000553427 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
CPSF2-202ENST00000553427 RPL13AP40429 203 aaKnown RBP11.03□□□□□ -0.64
CPSF2-202ENST00000553427 PRLHP81277 87 aa11.03□□□□□ -0.64
CPSF2-202ENST00000553427 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
CPSF2-202ENST00000553427 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
CPSF2-202ENST00000553427 LINC00308Q8TCZ7 52 aa11.02□□□□□ -0.65
CPSF2-202ENST00000553427 KRTAP4-16G5E9R7 235 aaPredicted RBP11.01□□□□□ -0.65
CPSF2-202ENST00000553427 S100A12P80511 92 aa11.01□□□□□ -0.65
CPSF2-202ENST00000553427 IGLV6-57P01721 117 aa11□□□□□ -0.65
CPSF2-202ENST00000553427 DDTP30046 118 aa11□□□□□ -0.65
CPSF2-202ENST00000553427 SPANXCQ9NY87 97 aa11□□□□□ -0.65
CPSF2-202ENST00000553427 NPC2P61916 151 aa10.99□□□□□ -0.65
CPSF2-202ENST00000553427 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
CPSF2-202ENST00000553427 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
CPSF2-202ENST00000553427 SCGB1D4Q6XE38 83 aa10.98□□□□□ -0.65
CPSF2-202ENST00000553427 FAM229BQ4G0N7 80 aa10.97□□□□□ -0.65
CPSF2-202ENST00000553427 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
CPSF2-202ENST00000553427 ETDCA0A1B0GVM5 59 aa10.96□□□□□ -0.65
CPSF2-202ENST00000553427 HSBP1L1C9JCN9 74 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms