RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TIMM17AQ99595 171 aa5.88□□□□□ -1.47
ACTN1-208ENST00000553370 IGLV5-39A0A0G2JS06 123 aa5.87□□□□□ -1.47
ACTN1-208ENST00000553370 IGIPA6NJ69 53 aa5.87□□□□□ -1.47
ACTN1-208ENST00000553370 A0A087X002 238 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 SCO1O75880 301 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 ATP5LO75964 103 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 FAM19A3Q7Z5A8 133 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 LINC00167Q96N53 147 aa5.86□□□□□ -1.47
ACTN1-208ENST00000553370 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 TRAV9-1A0A075B6T8 112 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 IGKV2D-26A0A0A0MRZ7 120 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 H3BRM9 83 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 SPINK8P0C7L1 97 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 S100PP25815 95 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 PDZD11Q5EBL8 140 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 ERASQ7Z444 233 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
ACTN1-208ENST00000553370 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 COLCA2A8K830 154 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 KIAA1644Q3SXP7 199 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 LINC00304Q8N9R0 145 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 RETNLBQ9BQ08 111 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
ACTN1-208ENST00000553370 LINC01549A6NIU2 74 aa5.83□□□□□ -1.48
ACTN1-208ENST00000553370 PFN2P35080 140 aa5.83□□□□□ -1.48
ACTN1-208ENST00000553370 NDUFA6P56556 154 aa5.83□□□□□ -1.48
ACTN1-208ENST00000553370 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
ACTN1-208ENST00000553370 CBLN2Q8IUK8 224 aa5.83□□□□□ -1.48
ACTN1-208ENST00000553370 Q75L30 129 aa5.82□□□□□ -1.48
ACTN1-208ENST00000553370 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
ACTN1-208ENST00000553370 MUC2Q02817 5179 aa5.82□□□□□ -1.48
ACTN1-208ENST00000553370 PRLHP81277 87 aa5.81□□□□□ -1.48
ACTN1-208ENST00000553370 PMVKQ15126 192 aa5.81□□□□□ -1.48
ACTN1-208ENST00000553370 COX19Q49B96 90 aa5.81□□□□□ -1.48
ACTN1-208ENST00000553370 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
ACTN1-208ENST00000553370 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
ACTN1-208ENST00000553370 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
ACTN1-208ENST00000553370 CST9LQ9H4G1 147 aa5.8□□□□□ -1.48
ACTN1-208ENST00000553370 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
ACTN1-208ENST00000553370 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 HIGD2AQ9BW72 106 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 GNB1LQ9BYB4 327 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 TMEM126AQ9H061 195 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
ACTN1-208ENST00000553370 TMEM238C9JI98 176 aa5.77□□□□□ -1.49
ACTN1-208ENST00000553370 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
ACTN1-208ENST00000553370 ZNF625Q96I27 306 aaPredicted RBP5.77□□□□□ -1.49
ACTN1-208ENST00000553370 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
ACTN1-208ENST00000553370 SND1-IT1Q9HBX3 110 aa5.76□□□□□ -1.49
ACTN1-208ENST00000553370 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
ACTN1-208ENST00000553370 COX17Q14061 63 aa5.75□□□□□ -1.49
ACTN1-208ENST00000553370 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
ACTN1-208ENST00000553370 TMEM170BQ5T4T1 132 aa5.75□□□□□ -1.49
ACTN1-208ENST00000553370 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
ACTN1-208ENST00000553370 ZNF706Q9Y5V0 76 aaPredicted RBP5.75□□□□□ -1.49
ACTN1-208ENST00000553370 LINC00158P58513 81 aa5.74□□□□□ -1.49
ACTN1-208ENST00000553370 LINC00337Q8N6G1 96 aa5.74□□□□□ -1.49
ACTN1-208ENST00000553370 TRAPPC1Q9Y5R8 145 aa5.74□□□□□ -1.49
ACTN1-208ENST00000553370 TRGC2P03986 189 aa5.73□□□□□ -1.49
ACTN1-208ENST00000553370 ZNF22P17026 224 aaPredicted RBP5.73□□□□□ -1.49
ACTN1-208ENST00000553370 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
ACTN1-208ENST00000553370 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
ACTN1-208ENST00000553370 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 LINC01546A6NGU7 62 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 M0R378 163 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 HBDP02042 147 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 S100A12P80511 92 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
ACTN1-208ENST00000553370 CTAG1AP78358 180 aa5.71□□□□□ -1.5
ACTN1-208ENST00000553370 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
ACTN1-208ENST00000553370 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.5
ACTN1-208ENST00000553370 BAGE3Q86Y29 109 aa5.71□□□□□ -1.5
ACTN1-208ENST00000553370 PLEKHB2Q96CS7 222 aa5.71□□□□□ -1.5
ACTN1-208ENST00000553370 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
ACTN1-208ENST00000553370 C11orf86A6NJI1 115 aa5.7□□□□□ -1.5
ACTN1-208ENST00000553370 NCR3O14931 201 aa5.7□□□□□ -1.5
ACTN1-208ENST00000553370 PMCHL1Q16048 86 aa5.7□□□□□ -1.5
ACTN1-208ENST00000553370 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BKO60814 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BJP06899 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 LINC00614P0C842 121 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BOP23527 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BBP33778 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BDP58876 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BCP62807 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST2H2BEQ16778 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.69□□□□□ -1.5
ACTN1-208ENST00000553370 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
ACTN1-208ENST00000553370 Q8NBF4 154 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BHQ93079 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 SPRR4Q96PI1 79 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BNQ99877 126 aa5.69□□□□□ -1.5
ACTN1-208ENST00000553370 HIST1H2BMQ99879 126 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms