RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 Q1T7F1 81 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 ENHOQ6UWT2 76 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 Q6ZQT0 140 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 NTM-AS1Q6ZSK4 140 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 LINC00336Q6ZUF6 198 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 TMEM254Q8TBM7 123 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 ZNF702PQ9H963 129 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 Q9HAA7 133 aa3.97□□□□□ -1.77
TMEM106C-221ENST00000553217 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 IGHV3OR16-8A0A075B7F1 116 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 IGHV3-49A0A0A0MS15 119 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 TRBV7-4A0A0J9YYF1 115 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 F8WEM9 126 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 H3BPC8 53 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 PRYO14603 147 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 FUSP35637 526 aaKnown RBP eCLIP3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 CCL18P55774 89 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 FAM104AQ969W3 186 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 FAM218AQ96MZ4 157 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 C16orf95Q9H693 158 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 C22orf24Q9Y442 160 aa3.96□□□□□ -1.78
TMEM106C-221ENST00000553217 IGKV2-28A0A075B6P5 120 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 A0A087WYN8 130 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 IGHV3OR16-9A0A0B4J2B5 98 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 NDUFS5O43920 106 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 IGKV2D-28P01615 120 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 IGHV3-11P01762 117 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 COX7BP24311 80 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 NREPQ16612 68 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 SOSTDC1Q6X4U4 206 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 C18orf65Q6ZTR6 163 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 VWFP04275 2813 aa3.95□□□□□ -1.78
TMEM106C-221ENST00000553217 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 BPY2O14599 106 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 NCR3O14931 201 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 RPL35AP18077 110 aaKnown RBP3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 UBE2BP63146 152 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 HAMPP81172 84 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 KHDC1LQ5JSQ8 128 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 LINC00575Q6W349 94 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 Q6ZVQ6 151 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 Q8N3U1 123 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 RYR3Q15413 4870 aa3.94□□□□□ -1.78
TMEM106C-221ENST00000553217 A0A087WVE0 104 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 K7EIL1 84 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 KRTAP10-11P60412 298 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 IL17DQ8TAD2 202 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 LIMD2Q9BT23 127 aa3.93□□□□□ -1.78
TMEM106C-221ENST00000553217 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
TMEM106C-221ENST00000553217 TRBV6-8A0A0A6YYG3 113 aa3.92□□□□□ -1.78
TMEM106C-221ENST00000553217 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
TMEM106C-221ENST00000553217 DIRC1Q969H9 104 aa3.92□□□□□ -1.78
TMEM106C-221ENST00000553217 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
TMEM106C-221ENST00000553217 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
TMEM106C-221ENST00000553217 COX6A2Q02221 97 aa3.91□□□□□ -1.78
TMEM106C-221ENST00000553217 CD164L2Q6UWJ8 174 aa3.91□□□□□ -1.78
TMEM106C-221ENST00000553217 FP248Q71RG6 208 aaPredicted RBP3.91□□□□□ -1.78
TMEM106C-221ENST00000553217 TOMM7Q9P0U1 55 aa3.91□□□□□ -1.78
TMEM106C-221ENST00000553217 A0A087X002 238 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 TRGV1A0A0A0MS02 117 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 OXTP01178 125 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 UBE2AP49459 152 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 DEFB131AP59861 70 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 DEFB136Q30KP8 78 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 C4orf3Q8WVX3 66 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 PKIGQ9Y2B9 76 aa3.9□□□□□ -1.79
TMEM106C-221ENST00000553217 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 TRGV2A0A075B6R0 118 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 TRGV4A0A0C4DH28 118 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 A0A0J9YWU9 116 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 LCE6AA0A183 80 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 LINC00959A0A1B0GUT2 108 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 A8MZ25 164 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 IGHV4-30-4P0DP06 118 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 RNASE13Q5GAN3 156 aaKnown RBP3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 FAM19A1Q7Z5A9 133 aa3.89□□□□□ -1.79
TMEM106C-221ENST00000553217 A0A0U1RRA0 63 aa3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 MP68P56378 58 aa3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 MAP6D1Q9H9H5 199 aa3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
TMEM106C-221ENST00000553217 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
TMEM106C-221ENST00000553217 IGKV3-20P01619 116 aa3.87□□□□□ -1.79
TMEM106C-221ENST00000553217 HTN1P15515 57 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms