RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 LEPROTO15243 131 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 PFN2P35080 140 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 HNRNPA3P51991 378 aaKnown RBP7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 LINC01545Q5VT33 79 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
TRAFD1-209ENST00000552896 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
TRAFD1-209ENST00000552896 HERV-K104P63124 156 aa7.26□□□□□ -1.25
TRAFD1-209ENST00000552896 SERTAD4-AS1Q5TG53 156 aa7.26□□□□□ -1.25
TRAFD1-209ENST00000552896 TP73-AS1Q9UF72 201 aa7.26□□□□□ -1.25
TRAFD1-209ENST00000552896 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
TRAFD1-209ENST00000552896 EIF4EBP3O60516 100 aaPredicted RBP7.25□□□□□ -1.25
TRAFD1-209ENST00000552896 C3orf79P0CE67 100 aa7.25□□□□□ -1.25
TRAFD1-209ENST00000552896 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
TRAFD1-209ENST00000552896 PSORS1C2Q9UIG4 136 aa7.25□□□□□ -1.25
TRAFD1-209ENST00000552896 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 J3QQQ9 107 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 NMUP48645 174 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 KRTDAPP60985 99 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 LRP1Q07954 4544 aaKnown RBP7.24□□□□□ -1.25
TRAFD1-209ENST00000552896 UBE2BP63146 152 aa7.23□□□□□ -1.25
TRAFD1-209ENST00000552896 LBHQ53QV2 105 aaPredicted RBP7.23□□□□□ -1.25
TRAFD1-209ENST00000552896 MRPL55Q7Z7F7 128 aaKnown RBP7.23□□□□□ -1.25
TRAFD1-209ENST00000552896 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
TRAFD1-209ENST00000552896 C20orf202A1L168 122 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 KRTAP29-1A8MX34 341 aaPredicted RBP7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 E9PLD3 99 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 LGALS3P17931 250 aaKnown RBP7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 LINC00158P58513 81 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 MEIG1Q5JSS6 88 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 KRTAP11-1Q8IUC1 163 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 NKAPP1Q8N9T2 125 aa7.22□□□□□ -1.25
TRAFD1-209ENST00000552896 C1orf137Q5JT78 98 aa7.21□□□□□ -1.26
TRAFD1-209ENST00000552896 OXTP01178 125 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 S100A6P06703 90 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 SMIM13P0DJ93 91 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 VPREB1P12018 145 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 S100A2P29034 98 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 AKR1D1P51857 326 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 HIST1H2BLQ99880 126 aa7.2□□□□□ -1.26
TRAFD1-209ENST00000552896 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
TRAFD1-209ENST00000552896 MIR7-3HGQ8N6C7 128 aa7.19□□□□□ -1.26
TRAFD1-209ENST00000552896 A0A0U1RRA0 63 aa7.18□□□□□ -1.26
TRAFD1-209ENST00000552896 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
TRAFD1-209ENST00000552896 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRAFD1-209ENST00000552896 LINC00167Q96N53 147 aa7.18□□□□□ -1.26
TRAFD1-209ENST00000552896 HERC1Q15751 4861 aa7.17□□□□□ -1.26
TRAFD1-209ENST00000552896 Q8NDZ9 215 aa7.17□□□□□ -1.26
TRAFD1-209ENST00000552896 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
TRAFD1-209ENST00000552896 IGKV2D-26A0A0A0MRZ7 120 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 A0A0J9YXY3 114 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.26
TRAFD1-209ENST00000552896 C5orf52A6NGY3 159 aa7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 BCE1O60756 84 aa7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 SNRPEP62304 92 aaKnown RBP7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 DAND5Q8N907 189 aa7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 DIRC1Q969H9 104 aa7.14□□□□□ -1.27
TRAFD1-209ENST00000552896 IGLV1-50A0A075B6I6 118 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 IGKV2-28A0A075B6P5 120 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 H0Y9J4 135 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 TIMM17BO60830 172 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 IGKV2D-28P01615 120 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 MIEN1Q9BRT3 115 aa7.13□□□□□ -1.27
TRAFD1-209ENST00000552896 TNXBP22105 4242 aa7.12□□□□□ -1.27
TRAFD1-209ENST00000552896 M0R378 163 aa7.12□□□□□ -1.27
TRAFD1-209ENST00000552896 NCR3O14931 201 aa7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 ZNF861PO60384 105 aa7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 LITAFQ99732 161 aa7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 TTTY13Q9BZ97 58 aa7.11□□□□□ -1.27
TRAFD1-209ENST00000552896 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 NDUFC2O95298 119 aa7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 SPANXB1Q9NS25 103 aaPredicted RBP7.1□□□□□ -1.27
TRAFD1-209ENST00000552896 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
TRAFD1-209ENST00000552896 KRTAP9-9Q9BYP9 154 aa7.09□□□□□ -1.27
TRAFD1-209ENST00000552896 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
TRAFD1-209ENST00000552896 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
TRAFD1-209ENST00000552896 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
TRAFD1-209ENST00000552896 PRYO14603 147 aa7.08□□□□□ -1.28
TRAFD1-209ENST00000552896 UBE2AP49459 152 aa7.08□□□□□ -1.28
TRAFD1-209ENST00000552896 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
TRAFD1-209ENST00000552896 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms