RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ACTR3CQ9C0K3 210 aaPredicted RBP1.06□□□□□ -2.24
PTCH1-223ENST00000551623 CTXND1A0A1B0GTU2 59 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 C5orf52A6NGY3 159 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 INMT-MINDY4F8WBC2 141 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 TCAPO15273 167 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 PPP1R17O96001 155 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR2DP22532 72 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 AKR1C3P42330 323 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 CKS1BP61024 79 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 HBBP68871 147 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 LRRC37A5PQ49AS3 106 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 C1orf195Q5TG92 126 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 SMCR5Q8TEV8 140 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR2FQ96RM1 72 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 ST20Q9HBF5 79 aa1.05□□□□□ -2.24
PTCH1-223ENST00000551623 TRBV20OR9-2A0A075B6H5 130 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 TRBV20-1A0A075B6N2 111 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 TRBV24-1A0A075B6N3 115 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 CCDC160A6NGH7 325 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 A8MWP4 228 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 MPC2O95563 127 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 PET100P0DJ07 73 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR1BP22528 89 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 FCER1GP30273 86 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 H2BFSP57053 126 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 DEFA3P59666 94 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 SSTP61278 116 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 KRTAP19-8Q3LI54 63 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 PYDC2Q56P42 97 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 C6orf226Q5I0X4 101 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 ALKAL2Q6UX46 152 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 Q6ZN92 141 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 ATP11AUNQ6ZP68 121 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 Q8NDZ9 215 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 PPP1R1CQ8WVI7 109 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 KCNQ1DNQ9H478 68 aa1.04□□□□□ -2.24
PTCH1-223ENST00000551623 CHTOPQ9Y3Y2 248 aaKnown RBP1.04□□□□□ -2.24
PTCH1-223ENST00000551623 A0A0G2JQZ4 141 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 CENPXA8MT69 81 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 PLA2G10O15496 165 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 NOL3O60936 208 aaKnown RBP1.03□□□□□ -2.24
PTCH1-223ENST00000551623 SCO1O75880 301 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 HRES1P13985 223 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 RAB4AP20338 218 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
PTCH1-223ENST00000551623 RPL39P62891 51 aaKnown RBP1.03□□□□□ -2.24
PTCH1-223ENST00000551623 COX17Q14061 63 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 SMIM15Q7Z3B0 74 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 AMELXQ99217 191 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 C20orf78Q9BR46 151 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 TPPP3Q9BW30 176 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 TMEM191AQ9H0A3 160 aa1.03□□□□□ -2.24
PTCH1-223ENST00000551623 MAP1LC3B2A6NCE7 125 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 LINC00862A6NCI5 91 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 A8MUU9 505 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 LYRM1O43325 122 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 ERC2-IT1O76042 136 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 IL7P13232 177 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 TAGLN2P37802 199 aaKnown RBP1.02□□□□□ -2.25
PTCH1-223ENST00000551623 HERVK_113P63121 156 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 SEC11AP67812 179 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 CCL20P78556 96 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 PDZD11Q5EBL8 140 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 CENPWQ5EE01 88 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 CST9LP1Q5W188 147 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 TRIQKQ629K1 86 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 C2orf66Q6UXQ4 117 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 Q6ZRX8 168 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 AKAP14Q86UN6 197 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 AMN1Q8IY45 258 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 MBD3L1Q8WWY6 194 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 TMEM141Q96I45 108 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 Q9BRP9 147 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 SPRR2GQ9BYE4 73 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 SMIM3Q9BZL3 60 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 MAP1LC3BQ9GZQ8 125 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 EIF5A2Q9GZV4 153 aaKnown RBP1.02□□□□□ -2.25
PTCH1-223ENST00000551623 SND1-IT1Q9HBX3 110 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 BIN3Q9NQY0 253 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 CDKN2A-AS1Q9UH64 79 aa1.02□□□□□ -2.25
PTCH1-223ENST00000551623 TRAV9-1A0A075B6T8 112 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 FXYD6-FXYD2A0A087WZ82 144 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 LOC107984156A0A0G2JMH3 177 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 IFI27P40305 119 aaPredicted RBP1.01□□□□□ -2.25
PTCH1-223ENST00000551623 GNG4P50150 75 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 TEX43Q6ZNM6 134 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 ARL17AQ8IVW1 177 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 SMIM2Q9BVW6 85 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 TOMM7Q9P0U1 55 aa1.01□□□□□ -2.25
PTCH1-223ENST00000551623 A0A1B0GUT8 65 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 IGIPA6NJ69 53 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 A8MWL6 223 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 PFDN1O60925 122 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 S100A5P33763 92 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 C9orf153Q5TBE3 101 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 Q5VV11 94 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 SFTA2Q6UW10 78 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 Q6ZVQ6 151 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 COX7B2Q8TF08 81 aa1□□□□□ -2.25
PTCH1-223ENST00000551623 TIMM17AQ99595 171 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms