RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
SMARCD1-211ENST00000551497 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
SMARCD1-211ENST00000551497 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
SMARCD1-211ENST00000551497 NMUP48645 174 aa9.38□□□□□ -0.91
SMARCD1-211ENST00000551497 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
SMARCD1-211ENST00000551497 Q8NDZ9 215 aa9.38□□□□□ -0.91
SMARCD1-211ENST00000551497 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
SMARCD1-211ENST00000551497 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
SMARCD1-211ENST00000551497 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
SMARCD1-211ENST00000551497 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
SMARCD1-211ENST00000551497 DAND5Q8N907 189 aa9.36□□□□□ -0.91
SMARCD1-211ENST00000551497 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-211ENST00000551497 A0A0J9YXY3 114 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 GAGE10A6NGK3 116 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 VPREB1P12018 145 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 UBE2BP63146 152 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
SMARCD1-211ENST00000551497 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
SMARCD1-211ENST00000551497 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
SMARCD1-211ENST00000551497 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
SMARCD1-211ENST00000551497 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
SMARCD1-211ENST00000551497 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
SMARCD1-211ENST00000551497 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
SMARCD1-211ENST00000551497 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
SMARCD1-211ENST00000551497 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
SMARCD1-211ENST00000551497 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
SMARCD1-211ENST00000551497 AKR1D1P51857 326 aa9.32□□□□□ -0.92
SMARCD1-211ENST00000551497 NKAPP1Q8N9T2 125 aa9.32□□□□□ -0.92
SMARCD1-211ENST00000551497 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
SMARCD1-211ENST00000551497 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMARCD1-211ENST00000551497 PCP2Q8IVA1 136 aa9.31□□□□□ -0.92
SMARCD1-211ENST00000551497 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
SMARCD1-211ENST00000551497 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-211ENST00000551497 LITAFQ99732 161 aa9.29□□□□□ -0.92
SMARCD1-211ENST00000551497 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
SMARCD1-211ENST00000551497 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
SMARCD1-211ENST00000551497 NPC2P61916 151 aa9.28□□□□□ -0.92
SMARCD1-211ENST00000551497 SOSTDC1Q6X4U4 206 aa9.28□□□□□ -0.92
SMARCD1-211ENST00000551497 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
SMARCD1-211ENST00000551497 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 NCR3O14931 201 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 TIMM17BO60830 172 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
SMARCD1-211ENST00000551497 HSBP1L1C9JCN9 74 aa9.25□□□□□ -0.93
SMARCD1-211ENST00000551497 M0R378 163 aa9.25□□□□□ -0.93
SMARCD1-211ENST00000551497 HERC1Q15751 4861 aa9.25□□□□□ -0.93
SMARCD1-211ENST00000551497 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
SMARCD1-211ENST00000551497 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
SMARCD1-211ENST00000551497 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-211ENST00000551497 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
SMARCD1-211ENST00000551497 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
SMARCD1-211ENST00000551497 BCE1O60756 84 aa9.22□□□□□ -0.93
SMARCD1-211ENST00000551497 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
SMARCD1-211ENST00000551497 NDUFC2O95298 119 aa9.2□□□□□ -0.94
SMARCD1-211ENST00000551497 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
SMARCD1-211ENST00000551497 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
SMARCD1-211ENST00000551497 PKHD1L1Q86WI1 4243 aa9.2□□□□□ -0.94
SMARCD1-211ENST00000551497 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
SMARCD1-211ENST00000551497 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
SMARCD1-211ENST00000551497 ZNF861PO60384 105 aa9.19□□□□□ -0.94
SMARCD1-211ENST00000551497 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 OXTP01178 125 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 DIRC1Q969H9 104 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
SMARCD1-211ENST00000551497 H0Y9J4 135 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 J3QL48 77 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 COX8AP10176 69 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 PYY3Q5JQD4 70 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
SMARCD1-211ENST00000551497 DDTP30046 118 aa9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 RPL28P46779 137 aaKnown RBP9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 UBE2AP49459 152 aa9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 PRLHP81277 87 aa9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 VAMP8Q9BV40 100 aa9.15□□□□□ -0.94
SMARCD1-211ENST00000551497 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
SMARCD1-211ENST00000551497 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
SMARCD1-211ENST00000551497 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
SMARCD1-211ENST00000551497 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
SMARCD1-211ENST00000551497 PRYO14603 147 aa9.13□□□□□ -0.95
SMARCD1-211ENST00000551497 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
SMARCD1-211ENST00000551497 IFITM1P13164 125 aa9.13□□□□□ -0.95
SMARCD1-211ENST00000551497 Q6ZVH6 145 aa9.13□□□□□ -0.95
SMARCD1-211ENST00000551497 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
SMARCD1-211ENST00000551497 SPRR1AP35321 89 aa9.12□□□□□ -0.95
SMARCD1-211ENST00000551497 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
SMARCD1-211ENST00000551497 DLEU1O43261 78 aa9.11□□□□□ -0.95
SMARCD1-211ENST00000551497 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
SMARCD1-211ENST00000551497 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms