RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 UBE2AP49459 152 aa10.37□□□□□ -0.75
PRPF40B-215ENST00000551418 IFI27L1Q96BM0 104 aa10.37□□□□□ -0.75
PRPF40B-215ENST00000551418 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
PRPF40B-215ENST00000551418 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
PRPF40B-215ENST00000551418 PRLHP81277 87 aa10.35□□□□□ -0.75
PRPF40B-215ENST00000551418 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
PRPF40B-215ENST00000551418 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
PRPF40B-215ENST00000551418 HSBP1O75506 76 aa10.33□□□□□ -0.76
PRPF40B-215ENST00000551418 VPREB1P12018 145 aa10.33□□□□□ -0.76
PRPF40B-215ENST00000551418 FAM229BQ4G0N7 80 aa10.33□□□□□ -0.76
PRPF40B-215ENST00000551418 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-215ENST00000551418 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
PRPF40B-215ENST00000551418 Q8NDZ9 215 aa10.32□□□□□ -0.76
PRPF40B-215ENST00000551418 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
PRPF40B-215ENST00000551418 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
PRPF40B-215ENST00000551418 LINC00158P58513 81 aa10.31□□□□□ -0.76
PRPF40B-215ENST00000551418 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
PRPF40B-215ENST00000551418 ATP6V1G1O75348 118 aa10.3□□□□□ -0.76
PRPF40B-215ENST00000551418 C3orf22Q8N5N4 141 aa10.3□□□□□ -0.76
PRPF40B-215ENST00000551418 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
PRPF40B-215ENST00000551418 HERV-K104P63124 156 aa10.29□□□□□ -0.76
PRPF40B-215ENST00000551418 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
PRPF40B-215ENST00000551418 CDIP1Q9H305 208 aa10.29□□□□□ -0.76
PRPF40B-215ENST00000551418 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
PRPF40B-215ENST00000551418 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
PRPF40B-215ENST00000551418 M0R378 163 aa10.27□□□□□ -0.77
PRPF40B-215ENST00000551418 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
PRPF40B-215ENST00000551418 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.77
PRPF40B-215ENST00000551418 MEIG1Q5JSS6 88 aa10.26□□□□□ -0.77
PRPF40B-215ENST00000551418 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
PRPF40B-215ENST00000551418 TRGC2P03986 189 aa10.25□□□□□ -0.77
PRPF40B-215ENST00000551418 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
PRPF40B-215ENST00000551418 MAP1LC3CQ9BXW4 147 aa10.25□□□□□ -0.77
PRPF40B-215ENST00000551418 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
PRPF40B-215ENST00000551418 HSPB8Q9UJY1 196 aa10.24□□□□□ -0.77
PRPF40B-215ENST00000551418 PLNP26678 52 aa10.23□□□□□ -0.77
PRPF40B-215ENST00000551418 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
PRPF40B-215ENST00000551418 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
PRPF40B-215ENST00000551418 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
PRPF40B-215ENST00000551418 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.77
PRPF40B-215ENST00000551418 H0Y8G0 127 aa10.21□□□□□ -0.77
PRPF40B-215ENST00000551418 SMIM13P0DJ93 91 aa10.21□□□□□ -0.77
PRPF40B-215ENST00000551418 S100A12P80511 92 aa10.21□□□□□ -0.77
PRPF40B-215ENST00000551418 SERF1AO75920 110 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 HERVK_113P61574 105 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 CTAG1AP78358 180 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 MIR7-3HGQ8N6C7 128 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 HIGD2AQ9BW72 106 aa10.2□□□□□ -0.78
PRPF40B-215ENST00000551418 PRYO14603 147 aa10.19□□□□□ -0.78
PRPF40B-215ENST00000551418 LEPROTO15243 131 aa10.18□□□□□ -0.78
PRPF40B-215ENST00000551418 NMUP48645 174 aa10.17□□□□□ -0.78
PRPF40B-215ENST00000551418 SPRR4Q96PI1 79 aa10.17□□□□□ -0.78
PRPF40B-215ENST00000551418 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
PRPF40B-215ENST00000551418 DPM2O94777 84 aa10.16□□□□□ -0.78
PRPF40B-215ENST00000551418 DAND5Q8N907 189 aa10.16□□□□□ -0.78
PRPF40B-215ENST00000551418 LINC00310P59036 64 aa10.15□□□□□ -0.78
PRPF40B-215ENST00000551418 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
PRPF40B-215ENST00000551418 J3QQQ9 107 aa10.14□□□□□ -0.79
PRPF40B-215ENST00000551418 IGKCP01834 107 aa10.14□□□□□ -0.79
PRPF40B-215ENST00000551418 MIEN1Q9BRT3 115 aa10.14□□□□□ -0.79
PRPF40B-215ENST00000551418 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
PRPF40B-215ENST00000551418 KCNQ1DNQ9H478 68 aa10.14□□□□□ -0.79
PRPF40B-215ENST00000551418 COLCA2A8K830 154 aa10.13□□□□□ -0.79
PRPF40B-215ENST00000551418 NCR3O14931 201 aa10.13□□□□□ -0.79
PRPF40B-215ENST00000551418 FABP4P15090 132 aa10.13□□□□□ -0.79
PRPF40B-215ENST00000551418 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
PRPF40B-215ENST00000551418 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
PRPF40B-215ENST00000551418 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
PRPF40B-215ENST00000551418 SPRR1AP35321 89 aa10.12□□□□□ -0.79
PRPF40B-215ENST00000551418 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
PRPF40B-215ENST00000551418 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
PRPF40B-215ENST00000551418 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
PRPF40B-215ENST00000551418 KRTAP13-3Q3SY46 172 aa10.11□□□□□ -0.79
PRPF40B-215ENST00000551418 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
PRPF40B-215ENST00000551418 Q8NBF4 154 aa10.11□□□□□ -0.79
PRPF40B-215ENST00000551418 TSPEAR-AS2P59090 65 aa10.1□□□□□ -0.79
PRPF40B-215ENST00000551418 TRBV10-3A0A0K0K1G6 114 aa10.08□□□□□ -0.8
PRPF40B-215ENST00000551418 FP248Q71RG6 208 aaPredicted RBP10.08□□□□□ -0.8
PRPF40B-215ENST00000551418 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
PRPF40B-215ENST00000551418 SPANXB1Q9NS25 103 aaPredicted RBP10.08□□□□□ -0.8
PRPF40B-215ENST00000551418 NDUFC2O95298 119 aa10.07□□□□□ -0.8
PRPF40B-215ENST00000551418 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
PRPF40B-215ENST00000551418 KRTAP4-16G5E9R7 235 aaPredicted RBP10.06□□□□□ -0.8
PRPF40B-215ENST00000551418 DDTP30046 118 aa10.06□□□□□ -0.8
PRPF40B-215ENST00000551418 PMCHL2Q9BQD1 86 aa10.06□□□□□ -0.8
PRPF40B-215ENST00000551418 E9PLD3 99 aa10.05□□□□□ -0.8
PRPF40B-215ENST00000551418 ASB16-AS1Q495Z4 193 aa10.05□□□□□ -0.8
PRPF40B-215ENST00000551418 CBY1Q9Y3M2 126 aa10.05□□□□□ -0.8
PRPF40B-215ENST00000551418 S100A7L2Q5SY68 101 aa10.04□□□□□ -0.8
PRPF40B-215ENST00000551418 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
PRPF40B-215ENST00000551418 ERC2-IT1O76042 136 aa10.02□□□□□ -0.81
PRPF40B-215ENST00000551418 B5MCH6 92 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BKO60814 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BJP06899 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BOP23527 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BBP33778 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BDP58876 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 HIST1H2BCP62807 126 aa10.01□□□□□ -0.81
PRPF40B-215ENST00000551418 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms