RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 MT1HP80294 61 aa10.31□□□□□ -0.76
RPAP3-207ENST00000551293 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
RPAP3-207ENST00000551293 PMVKQ15126 192 aa10.3□□□□□ -0.76
RPAP3-207ENST00000551293 KRTAP19-2Q3LHN2 52 aa10.29□□□□□ -0.76
RPAP3-207ENST00000551293 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
RPAP3-207ENST00000551293 NDUFA12Q9UI09 145 aa10.29□□□□□ -0.76
RPAP3-207ENST00000551293 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
RPAP3-207ENST00000551293 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
RPAP3-207ENST00000551293 MT-ND4LP03901 98 aa10.28□□□□□ -0.76
RPAP3-207ENST00000551293 XP32Q5T750 250 aa10.28□□□□□ -0.76
RPAP3-207ENST00000551293 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
RPAP3-207ENST00000551293 NDUFA6P56556 154 aa10.27□□□□□ -0.77
RPAP3-207ENST00000551293 MOBPQ13875 183 aa10.27□□□□□ -0.77
RPAP3-207ENST00000551293 Q8N377 158 aa10.27□□□□□ -0.77
RPAP3-207ENST00000551293 A0A1B0GVG6 124 aa10.26□□□□□ -0.77
RPAP3-207ENST00000551293 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
RPAP3-207ENST00000551293 ANAPC16Q96DE5 110 aa10.26□□□□□ -0.77
RPAP3-207ENST00000551293 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
RPAP3-207ENST00000551293 COX17Q14061 63 aa10.25□□□□□ -0.77
RPAP3-207ENST00000551293 IGLC3P0DOY3 106 aa10.24□□□□□ -0.77
RPAP3-207ENST00000551293 LINC00158P58513 81 aa10.24□□□□□ -0.77
RPAP3-207ENST00000551293 NCR3O14931 201 aa10.22□□□□□ -0.77
RPAP3-207ENST00000551293 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.77
RPAP3-207ENST00000551293 ETDCA0A1B0GVM5 59 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 PRYO14603 147 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 SLC25A20O43772 301 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 LINC00483Q53H64 154 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
RPAP3-207ENST00000551293 LINC01546A6NGU7 62 aa10.19□□□□□ -0.78
RPAP3-207ENST00000551293 LORP23490 312 aaPredicted RBP10.19□□□□□ -0.78
RPAP3-207ENST00000551293 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
RPAP3-207ENST00000551293 IGLV8-61A0A075B6I0 122 aa10.18□□□□□ -0.78
RPAP3-207ENST00000551293 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
RPAP3-207ENST00000551293 KRTAP10-6P60371 365 aaPredicted RBP10.18□□□□□ -0.78
RPAP3-207ENST00000551293 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
RPAP3-207ENST00000551293 BOD1L2Q8IYS8 172 aa10.17□□□□□ -0.78
RPAP3-207ENST00000551293 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
RPAP3-207ENST00000551293 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
RPAP3-207ENST00000551293 SPRR1AP35321 89 aa10.16□□□□□ -0.78
RPAP3-207ENST00000551293 TMEM170BQ5T4T1 132 aa10.16□□□□□ -0.78
RPAP3-207ENST00000551293 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
RPAP3-207ENST00000551293 RPS29P62273 56 aaKnown RBP10.15□□□□□ -0.78
RPAP3-207ENST00000551293 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
RPAP3-207ENST00000551293 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
RPAP3-207ENST00000551293 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
RPAP3-207ENST00000551293 SSBP3-AS1Q7Z2R9 100 aa10.14□□□□□ -0.79
RPAP3-207ENST00000551293 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
RPAP3-207ENST00000551293 A0A096LNJ9 63 aa10.12□□□□□ -0.79
RPAP3-207ENST00000551293 M0R2T5 61 aa10.12□□□□□ -0.79
RPAP3-207ENST00000551293 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
RPAP3-207ENST00000551293 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
RPAP3-207ENST00000551293 B5MCH6 92 aa10.11□□□□□ -0.79
RPAP3-207ENST00000551293 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
RPAP3-207ENST00000551293 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
RPAP3-207ENST00000551293 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
RPAP3-207ENST00000551293 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
RPAP3-207ENST00000551293 Q9BRP9 147 aa10.09□□□□□ -0.79
RPAP3-207ENST00000551293 FABP9Q0Z7S8 132 aa10.08□□□□□ -0.8
RPAP3-207ENST00000551293 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
RPAP3-207ENST00000551293 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
RPAP3-207ENST00000551293 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
RPAP3-207ENST00000551293 HBDP02042 147 aa10.04□□□□□ -0.8
RPAP3-207ENST00000551293 TRAV9-1A0A075B6T8 112 aa10.03□□□□□ -0.8
RPAP3-207ENST00000551293 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
RPAP3-207ENST00000551293 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
RPAP3-207ENST00000551293 S100A12P80511 92 aa10.02□□□□□ -0.81
RPAP3-207ENST00000551293 ST20-AS1Q8NBB2 130 aa10.02□□□□□ -0.81
RPAP3-207ENST00000551293 KRTAP9-7A8MTY7 169 aa10.01□□□□□ -0.81
RPAP3-207ENST00000551293 DDTP30046 118 aa10.01□□□□□ -0.81
RPAP3-207ENST00000551293 Q6ZRX8 168 aa10.01□□□□□ -0.81
RPAP3-207ENST00000551293 LINC00614P0C842 121 aa10□□□□□ -0.81
RPAP3-207ENST00000551293 S100PP25815 95 aa10□□□□□ -0.81
RPAP3-207ENST00000551293 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
RPAP3-207ENST00000551293 FLGP20930 4061 aaPredicted RBP9.98□□□□□ -0.81
RPAP3-207ENST00000551293 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.98□□□□□ -0.81
RPAP3-207ENST00000551293 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
RPAP3-207ENST00000551293 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
RPAP3-207ENST00000551293 IGLV6-57P01721 117 aa9.95□□□□□ -0.82
RPAP3-207ENST00000551293 HERV-K104P63124 156 aa9.94□□□□□ -0.82
RPAP3-207ENST00000551293 COX19Q49B96 90 aa9.93□□□□□ -0.82
RPAP3-207ENST00000551293 LIMD2Q9BT23 127 aa9.93□□□□□ -0.82
RPAP3-207ENST00000551293 MAP1LC3CQ9BXW4 147 aa9.92□□□□□ -0.82
RPAP3-207ENST00000551293 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
RPAP3-207ENST00000551293 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
RPAP3-207ENST00000551293 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
RPAP3-207ENST00000551293 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
RPAP3-207ENST00000551293 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
RPAP3-207ENST00000551293 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
RPAP3-207ENST00000551293 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
RPAP3-207ENST00000551293 H7C2G1 150 aa9.89□□□□□ -0.83
RPAP3-207ENST00000551293 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
RPAP3-207ENST00000551293 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
RPAP3-207ENST00000551293 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
RPAP3-207ENST00000551293 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
RPAP3-207ENST00000551293 SSPOA2VEC9 5147 aa9.88□□□□□ -0.83
RPAP3-207ENST00000551293 USH2AO75445 5202 aa9.87□□□□□ -0.83
RPAP3-207ENST00000551293 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
RPAP3-207ENST00000551293 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
RPAP3-207ENST00000551293 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms