RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
RAB5B-208ENST00000550283 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
RAB5B-208ENST00000550283 LGALS3P17931 250 aaKnown RBP7.05□□□□□ -1.28
RAB5B-208ENST00000550283 TAL2Q16559 108 aa7.05□□□□□ -1.28
RAB5B-208ENST00000550283 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
RAB5B-208ENST00000550283 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 LEPROTO15243 131 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 APOMO95445 188 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 ZNF22P17026 224 aaPredicted RBP7.04□□□□□ -1.28
RAB5B-208ENST00000550283 PTTG1IPP53801 180 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 CEND1Q8N111 149 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
RAB5B-208ENST00000550283 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 H3BRM9 83 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 Q6ZVH6 145 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
RAB5B-208ENST00000550283 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 J3QQQ9 107 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 SPINK8P0C7L1 97 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 Q6ZRP5 223 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 DPH3Q96FX2 82 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
RAB5B-208ENST00000550283 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
RAB5B-208ENST00000550283 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 SMIM13P0DJ93 91 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 FXYD2P54710 66 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 HERVK_113P63121 156 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 RPL18AQ02543 176 aaKnown RBP7.01□□□□□ -1.29
RAB5B-208ENST00000550283 VAMP3Q15836 100 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
RAB5B-208ENST00000550283 NDUFA1O15239 70 aa7□□□□□ -1.29
RAB5B-208ENST00000550283 RPL37AP61513 92 aaKnown RBP7□□□□□ -1.29
RAB5B-208ENST00000550283 RNF151Q2KHN1 245 aa7□□□□□ -1.29
RAB5B-208ENST00000550283 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
RAB5B-208ENST00000550283 PLA2G1BP04054 148 aaKnown RBP6.99□□□□□ -1.29
RAB5B-208ENST00000550283 SRSF9Q13242 221 aaKnown RBP eCLIP6.99□□□□□ -1.29
RAB5B-208ENST00000550283 Q8IZM0 81 aa6.99□□□□□ -1.29
RAB5B-208ENST00000550283 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
RAB5B-208ENST00000550283 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
RAB5B-208ENST00000550283 UBE2V1Q13404 147 aa6.98□□□□□ -1.29
RAB5B-208ENST00000550283 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
RAB5B-208ENST00000550283 C9orf129Q5T035 196 aaKnown RBP6.98□□□□□ -1.29
RAB5B-208ENST00000550283 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
RAB5B-208ENST00000550283 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
RAB5B-208ENST00000550283 K7ERJ3 54 aa6.97□□□□□ -1.29
RAB5B-208ENST00000550283 TLX1NBP0CAT3 122 aa6.97□□□□□ -1.29
RAB5B-208ENST00000550283 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
RAB5B-208ENST00000550283 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
RAB5B-208ENST00000550283 COX7B2Q8TF08 81 aa6.97□□□□□ -1.29
RAB5B-208ENST00000550283 IGLV5-39A0A0G2JS06 123 aa6.96□□□□□ -1.3
RAB5B-208ENST00000550283 F8WDY8 70 aa6.96□□□□□ -1.3
RAB5B-208ENST00000550283 H3BUT2 72 aa6.96□□□□□ -1.3
RAB5B-208ENST00000550283 TRBV30A0A0K0K1B3 111 aa6.95□□□□□ -1.3
RAB5B-208ENST00000550283 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
RAB5B-208ENST00000550283 PRSS2P07478 247 aa6.95□□□□□ -1.3
RAB5B-208ENST00000550283 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 A0A1W2PPM0 123 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 CKS1BP61024 79 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
RAB5B-208ENST00000550283 SERTAD4-AS1Q5TG53 156 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 GTF2H5Q6ZYL4 71 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-208ENST00000550283 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
RAB5B-208ENST00000550283 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
RAB5B-208ENST00000550283 A0A1B0GWB2 263 aa6.93□□□□□ -1.3
RAB5B-208ENST00000550283 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
RAB5B-208ENST00000550283 K7EP34 96 aa6.93□□□□□ -1.3
RAB5B-208ENST00000550283 FABP2P12104 132 aa6.93□□□□□ -1.3
RAB5B-208ENST00000550283 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
RAB5B-208ENST00000550283 Q8NDZ9 215 aa6.91□□□□□ -1.3
RAB5B-208ENST00000550283 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
RAB5B-208ENST00000550283 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-208ENST00000550283 PSORS1C2Q9UIG4 136 aa6.91□□□□□ -1.3
RAB5B-208ENST00000550283 RPL24P83731 157 aaKnown RBP6.9□□□□□ -1.3
RAB5B-208ENST00000550283 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
RAB5B-208ENST00000550283 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
RAB5B-208ENST00000550283 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.3
RAB5B-208ENST00000550283 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-208ENST00000550283 TIMM17BO60830 172 aa6.89□□□□□ -1.31
RAB5B-208ENST00000550283 CXCL5P42830 114 aa6.89□□□□□ -1.31
RAB5B-208ENST00000550283 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
RAB5B-208ENST00000550283 M0QXV9 152 aa6.88□□□□□ -1.31
RAB5B-208ENST00000550283 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
RAB5B-208ENST00000550283 PFN2P35080 140 aa6.88□□□□□ -1.31
RAB5B-208ENST00000550283 A4D1N5 150 aa6.87□□□□□ -1.31
RAB5B-208ENST00000550283 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
RAB5B-208ENST00000550283 CFC1P0CG37 223 aa6.87□□□□□ -1.31
RAB5B-208ENST00000550283 HERV-K104P63124 156 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms