RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 TRGC2P03986 189 aa11□□□□□ -0.65
CHMP1A-207ENST00000549328 TYMSOSQ8TAI1 123 aa11□□□□□ -0.65
CHMP1A-207ENST00000549328 FAM229BQ4G0N7 80 aa10.99□□□□□ -0.65
CHMP1A-207ENST00000549328 TMEM238C9JI98 176 aa10.98□□□□□ -0.65
CHMP1A-207ENST00000549328 M0R378 163 aa10.98□□□□□ -0.65
CHMP1A-207ENST00000549328 HERV-K104P63124 156 aa10.98□□□□□ -0.65
CHMP1A-207ENST00000549328 FAM19A1Q7Z5A9 133 aa10.98□□□□□ -0.65
CHMP1A-207ENST00000549328 LINC00587B1AMM8 73 aa10.97□□□□□ -0.65
CHMP1A-207ENST00000549328 ATP6V1G1O75348 118 aa10.97□□□□□ -0.65
CHMP1A-207ENST00000549328 LEPROTL1O95214 131 aa10.97□□□□□ -0.65
CHMP1A-207ENST00000549328 PRLHP81277 87 aa10.97□□□□□ -0.65
CHMP1A-207ENST00000549328 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
CHMP1A-207ENST00000549328 A0A0U1RRA0 63 aa10.96□□□□□ -0.65
CHMP1A-207ENST00000549328 PRR4Q16378 134 aa10.96□□□□□ -0.65
CHMP1A-207ENST00000549328 LPAP08519 4548 aa10.95□□□□□ -0.66
CHMP1A-207ENST00000549328 SERF1AO75920 110 aa10.95□□□□□ -0.66
CHMP1A-207ENST00000549328 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
CHMP1A-207ENST00000549328 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
CHMP1A-207ENST00000549328 TSPAN13O95857 204 aa10.94□□□□□ -0.66
CHMP1A-207ENST00000549328 LINC00310P59036 64 aa10.94□□□□□ -0.66
CHMP1A-207ENST00000549328 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
CHMP1A-207ENST00000549328 MEIG1Q5JSS6 88 aa10.94□□□□□ -0.66
CHMP1A-207ENST00000549328 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
CHMP1A-207ENST00000549328 H0Y8G0 127 aa10.93□□□□□ -0.66
CHMP1A-207ENST00000549328 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
CHMP1A-207ENST00000549328 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 PLNP26678 52 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 SLC7A5P1Q8MH63 180 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 PLEKHB2Q96CS7 222 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
CHMP1A-207ENST00000549328 MAP1LC3CQ9BXW4 147 aa10.91□□□□□ -0.66
CHMP1A-207ENST00000549328 IGKV2D-26A0A0A0MRZ7 120 aa10.9□□□□□ -0.66
CHMP1A-207ENST00000549328 COLCA2A8K830 154 aa10.9□□□□□ -0.66
CHMP1A-207ENST00000549328 LEPROTO15243 131 aa10.9□□□□□ -0.66
CHMP1A-207ENST00000549328 DPM2O94777 84 aa10.88□□□□□ -0.67
CHMP1A-207ENST00000549328 CTAG1AP78358 180 aa10.88□□□□□ -0.67
CHMP1A-207ENST00000549328 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
CHMP1A-207ENST00000549328 PRYO14603 147 aa10.87□□□□□ -0.67
CHMP1A-207ENST00000549328 FABP4P15090 132 aa10.87□□□□□ -0.67
CHMP1A-207ENST00000549328 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
CHMP1A-207ENST00000549328 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
CHMP1A-207ENST00000549328 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
CHMP1A-207ENST00000549328 SPRR1AP35321 89 aa10.86□□□□□ -0.67
CHMP1A-207ENST00000549328 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
CHMP1A-207ENST00000549328 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
CHMP1A-207ENST00000549328 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
CHMP1A-207ENST00000549328 J3QQQ9 107 aa10.85□□□□□ -0.67
CHMP1A-207ENST00000549328 HERVK_113P61574 105 aa10.85□□□□□ -0.67
CHMP1A-207ENST00000549328 NCR3O14931 201 aa10.84□□□□□ -0.67
CHMP1A-207ENST00000549328 IGKCP01834 107 aa10.84□□□□□ -0.67
CHMP1A-207ENST00000549328 NMUP48645 174 aa10.84□□□□□ -0.67
CHMP1A-207ENST00000549328 SPRR4Q96PI1 79 aa10.83□□□□□ -0.68
CHMP1A-207ENST00000549328 ZNF706Q9Y5V0 76 aaPredicted RBP10.83□□□□□ -0.68
CHMP1A-207ENST00000549328 TRBV10-3A0A0K0K1G6 114 aa10.82□□□□□ -0.68
CHMP1A-207ENST00000549328 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
CHMP1A-207ENST00000549328 S100A12P80511 92 aa10.82□□□□□ -0.68
CHMP1A-207ENST00000549328 PMCHL2Q9BQD1 86 aa10.82□□□□□ -0.68
CHMP1A-207ENST00000549328 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
CHMP1A-207ENST00000549328 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
CHMP1A-207ENST00000549328 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
CHMP1A-207ENST00000549328 DAND5Q8N907 189 aa10.8□□□□□ -0.68
CHMP1A-207ENST00000549328 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
CHMP1A-207ENST00000549328 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
CHMP1A-207ENST00000549328 MIEN1Q9BRT3 115 aa10.78□□□□□ -0.68
CHMP1A-207ENST00000549328 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
CHMP1A-207ENST00000549328 E9PLD3 99 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 NDUFC2O95298 119 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 DDTP30046 118 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
CHMP1A-207ENST00000549328 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
CHMP1A-207ENST00000549328 B5MCH6 92 aa10.74□□□□□ -0.69
CHMP1A-207ENST00000549328 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
CHMP1A-207ENST00000549328 A0A0J9YXY3 114 aa10.73□□□□□ -0.69
CHMP1A-207ENST00000549328 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
CHMP1A-207ENST00000549328 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
CHMP1A-207ENST00000549328 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
CHMP1A-207ENST00000549328 S100A7L2Q5SY68 101 aa10.71□□□□□ -0.69
CHMP1A-207ENST00000549328 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
CHMP1A-207ENST00000549328 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
CHMP1A-207ENST00000549328 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
CHMP1A-207ENST00000549328 Q6ZRX8 168 aa10.7□□□□□ -0.7
CHMP1A-207ENST00000549328 PPDPFQ9H3Y8 114 aa10.7□□□□□ -0.7
CHMP1A-207ENST00000549328 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
CHMP1A-207ENST00000549328 PET117Q6UWS5 81 aa10.69□□□□□ -0.7
CHMP1A-207ENST00000549328 SOSTDC1Q6X4U4 206 aa10.69□□□□□ -0.7
CHMP1A-207ENST00000549328 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
CHMP1A-207ENST00000549328 Q9BRP9 147 aa10.68□□□□□ -0.7
CHMP1A-207ENST00000549328 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms