RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 C9orf116Q5BN46 136 aaPredicted RBP6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 Q6ZRP5 223 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 Q6ZSA8 131 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 GAGE2EQ4V326 116 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 MIR7-3HGQ8N6C7 128 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 GAGE2DQ9UEU5 116 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 PLA2G2DQ9UNK4 145 aa6.26□□□□□ -1.41
SMARCD1-206ENST00000549274 A0A096LNI7 61 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 LOC107984156A0A0G2JMH3 177 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 ARL17AQ8IVW1 177 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 SPANXB1Q9NS25 103 aaPredicted RBP6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 CBY1Q9Y3M2 126 aa6.25□□□□□ -1.41
SMARCD1-206ENST00000549274 TSTD3H0UI37 97 aa6.24□□□□□ -1.41
SMARCD1-206ENST00000549274 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
SMARCD1-206ENST00000549274 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMARCD1-206ENST00000549274 LBHQ53QV2 105 aaPredicted RBP6.24□□□□□ -1.41
SMARCD1-206ENST00000549274 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
SMARCD1-206ENST00000549274 DYNC1H1Q14204 4646 aaKnown RBP6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 NDUFC2O95298 119 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 LINC01620Q4KN68 170 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 NKAPP1Q8N9T2 125 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 C12orf57Q99622 126 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 TTTY13Q9BZ97 58 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 PLAC8Q9NZF1 115 aa6.23□□□□□ -1.41
SMARCD1-206ENST00000549274 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 TAL2Q16559 108 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 LINC00518Q8N0U6 118 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 LITAFQ99732 161 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 DNAH8Q96JB1 4490 aa6.22□□□□□ -1.41
SMARCD1-206ENST00000549274 A0A087WYN8 130 aa6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 C9orf129Q5T035 196 aaKnown RBP6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 LINC00308Q8TCZ7 52 aa6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 C7orf33Q8WU49 177 aa6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 HIST1H4GQ99525 98 aa6.21□□□□□ -1.42
SMARCD1-206ENST00000549274 EPM2AB3EWF7 344 aa6.2□□□□□ -1.42
SMARCD1-206ENST00000549274 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
SMARCD1-206ENST00000549274 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
SMARCD1-206ENST00000549274 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
SMARCD1-206ENST00000549274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
SMARCD1-206ENST00000549274 M0QXV9 152 aa6.19□□□□□ -1.42
SMARCD1-206ENST00000549274 M0R378 163 aa6.19□□□□□ -1.42
SMARCD1-206ENST00000549274 HNRNPA3P51991 378 aaKnown RBP6.19□□□□□ -1.42
SMARCD1-206ENST00000549274 ADAMTSL4-AS1Q5T5F5 129 aa6.19□□□□□ -1.42
SMARCD1-206ENST00000549274 FAM19A5Q7Z5A7 132 aaPredicted RBP6.19□□□□□ -1.42
SMARCD1-206ENST00000549274 VPREB1P12018 145 aa6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 HSD52Q0P140 79 aa6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 SCXQ7RTU7 201 aa6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 DAND5Q8N907 189 aa6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
SMARCD1-206ENST00000549274 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
SMARCD1-206ENST00000549274 UBE2BP63146 152 aa6.17□□□□□ -1.42
SMARCD1-206ENST00000549274 C22orf24Q9Y442 160 aa6.17□□□□□ -1.42
SMARCD1-206ENST00000549274 A0A1W2PNN7 141 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 NPC2P61916 151 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 S100A7L2Q5SY68 101 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 SERTAD4-AS1Q5TG53 156 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
SMARCD1-206ENST00000549274 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
SMARCD1-206ENST00000549274 PANO1I0J062 215 aa6.15□□□□□ -1.42
SMARCD1-206ENST00000549274 M0R143 59 aa6.15□□□□□ -1.42
SMARCD1-206ENST00000549274 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
SMARCD1-206ENST00000549274 CEND1Q8N111 149 aa6.15□□□□□ -1.42
SMARCD1-206ENST00000549274 APOBP04114 4563 aaKnown RBP6.14□□□□□ -1.43
SMARCD1-206ENST00000549274 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
SMARCD1-206ENST00000549274 XGP55808 180 aa6.14□□□□□ -1.43
SMARCD1-206ENST00000549274 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
SMARCD1-206ENST00000549274 PRYO14603 147 aa6.13□□□□□ -1.43
SMARCD1-206ENST00000549274 NCR3O14931 201 aa6.13□□□□□ -1.43
SMARCD1-206ENST00000549274 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
SMARCD1-206ENST00000549274 DDTP30046 118 aa6.13□□□□□ -1.43
SMARCD1-206ENST00000549274 LINC00167Q96N53 147 aa6.13□□□□□ -1.43
SMARCD1-206ENST00000549274 HINT1P49773 126 aaPredicted RBP6.12□□□□□ -1.43
SMARCD1-206ENST00000549274 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
SMARCD1-206ENST00000549274 OR13C6PQ8NH95 151 aa6.12□□□□□ -1.43
SMARCD1-206ENST00000549274 RAB37Q96AX2 223 aa6.12□□□□□ -1.43
SMARCD1-206ENST00000549274 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
SMARCD1-206ENST00000549274 A0A0B4J2C4 111 aa6.11□□□□□ -1.43
SMARCD1-206ENST00000549274 IGLV6-57P01721 117 aa6.11□□□□□ -1.43
SMARCD1-206ENST00000549274 A6NDN8 102 aa6.1□□□□□ -1.43
SMARCD1-206ENST00000549274 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms