RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 DAND5Q8N907 189 aa13.23□□□□□ -0.29
CACNB3-210ENST00000548874 SCGB1D4Q6XE38 83 aa13.22□□□□□ -0.29
CACNB3-210ENST00000548874 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.29
CACNB3-210ENST00000548874 SMR3BP02814 79 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-210ENST00000548874 COX8AP10176 69 aa13.21□□□□□ -0.29
CACNB3-210ENST00000548874 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.29
CACNB3-210ENST00000548874 BOD1L2Q8IYS8 172 aa13.21□□□□□ -0.29
CACNB3-210ENST00000548874 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
CACNB3-210ENST00000548874 LOC105371267A0A1B0GV96 52 aa13.2□□□□□ -0.3
CACNB3-210ENST00000548874 KRTAP17-1Q9BYP8 105 aa13.2□□□□□ -0.3
CACNB3-210ENST00000548874 M0QXV9 152 aa13.19□□□□□ -0.3
CACNB3-210ENST00000548874 VPREB1P12018 145 aa13.19□□□□□ -0.3
CACNB3-210ENST00000548874 Q8NDZ9 215 aa13.19□□□□□ -0.3
CACNB3-210ENST00000548874 DLEU1O43261 78 aa13.18□□□□□ -0.3
CACNB3-210ENST00000548874 PHF5AQ7RTV0 110 aaKnown RBP13.18□□□□□ -0.3
CACNB3-210ENST00000548874 LINC00528Q8N1L1 170 aa13.18□□□□□ -0.3
CACNB3-210ENST00000548874 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
CACNB3-210ENST00000548874 C22orf24Q9Y442 160 aa13.18□□□□□ -0.3
CACNB3-210ENST00000548874 TMEM238C9JI98 176 aa13.17□□□□□ -0.3
CACNB3-210ENST00000548874 SOSTDC1Q6X4U4 206 aa13.17□□□□□ -0.3
CACNB3-210ENST00000548874 RPL24P83731 157 aaKnown RBP13.16□□□□□ -0.3
CACNB3-210ENST00000548874 Q8N1X5 172 aa13.16□□□□□ -0.3
CACNB3-210ENST00000548874 C14orf144Q96I85 54 aa13.16□□□□□ -0.3
CACNB3-210ENST00000548874 SPANXDQ9BXN6 97 aa13.16□□□□□ -0.3
CACNB3-210ENST00000548874 SPANXCQ9NY87 97 aa13.16□□□□□ -0.3
CACNB3-210ENST00000548874 HERC2O95714 4834 aa13.15□□□□□ -0.3
CACNB3-210ENST00000548874 EIF4EBP3O60516 100 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-210ENST00000548874 LINC00308Q8TCZ7 52 aa13.14□□□□□ -0.31
CACNB3-210ENST00000548874 C7orf33Q8WU49 177 aa13.14□□□□□ -0.31
CACNB3-210ENST00000548874 MRPL55Q7Z7F7 128 aaKnown RBP13.13□□□□□ -0.31
CACNB3-210ENST00000548874 NKAPP1Q8N9T2 125 aa13.13□□□□□ -0.31
CACNB3-210ENST00000548874 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
CACNB3-210ENST00000548874 SMIM6P0DI80 62 aa13.12□□□□□ -0.31
CACNB3-210ENST00000548874 NPC2P61916 151 aa13.12□□□□□ -0.31
CACNB3-210ENST00000548874 LBHQ53QV2 105 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-210ENST00000548874 Q6ZVH6 145 aa13.12□□□□□ -0.31
CACNB3-210ENST00000548874 S100A12P80511 92 aa13.11□□□□□ -0.31
CACNB3-210ENST00000548874 SLC25A34Q6PIV7 304 aa13.11□□□□□ -0.31
CACNB3-210ENST00000548874 SPANXB1Q9NS25 103 aaPredicted RBP13.11□□□□□ -0.31
CACNB3-210ENST00000548874 FAT1Q14517 4588 aa13.11□□□□□ -0.31
CACNB3-210ENST00000548874 FAM229AH3BQW9 127 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 NDUFC2O95298 119 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 Q5VSD8 79 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 KRTAP11-1Q8IUC1 163 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 LINC00167Q96N53 147 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
CACNB3-210ENST00000548874 IFITM1P13164 125 aa13.09□□□□□ -0.31
CACNB3-210ENST00000548874 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
CACNB3-210ENST00000548874 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.32
CACNB3-210ENST00000548874 M0R378 163 aa13.07□□□□□ -0.32
CACNB3-210ENST00000548874 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
CACNB3-210ENST00000548874 UBE2BP63146 152 aa13.07□□□□□ -0.32
CACNB3-210ENST00000548874 GAGE10A6NGK3 116 aa13.06□□□□□ -0.32
CACNB3-210ENST00000548874 C2orf91Q6ZV80 131 aa13.06□□□□□ -0.32
CACNB3-210ENST00000548874 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
CACNB3-210ENST00000548874 HIGD1BQ9P298 99 aa13.06□□□□□ -0.32
CACNB3-210ENST00000548874 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
CACNB3-210ENST00000548874 NCR3O14931 201 aa13.05□□□□□ -0.32
CACNB3-210ENST00000548874 PLA2G1BP04054 148 aaKnown RBP13.05□□□□□ -0.32
CACNB3-210ENST00000548874 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-210ENST00000548874 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
CACNB3-210ENST00000548874 PSORS1C2Q9UIG4 136 aa13.05□□□□□ -0.32
CACNB3-210ENST00000548874 IGLV1-50A0A075B6I6 118 aa13.03□□□□□ -0.32
CACNB3-210ENST00000548874 RPL37AP8A6NKH3 93 aa13.03□□□□□ -0.32
CACNB3-210ENST00000548874 KRTAP4-5Q9BYR2 181 aa13.01□□□□□ -0.33
CACNB3-210ENST00000548874 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
CACNB3-210ENST00000548874 IGKV2D-28P01615 120 aa13□□□□□ -0.33
CACNB3-210ENST00000548874 UQCR10Q9UDW1 63 aa13□□□□□ -0.33
CACNB3-210ENST00000548874 VPS13BQ7Z7G8 4022 aa12.99□□□□□ -0.33
CACNB3-210ENST00000548874 HIST1H4GQ99525 98 aa12.99□□□□□ -0.33
CACNB3-210ENST00000548874 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
CACNB3-210ENST00000548874 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
CACNB3-210ENST00000548874 LINC00518Q8N0U6 118 aa12.97□□□□□ -0.33
CACNB3-210ENST00000548874 IGLV6-57P01721 117 aa12.96□□□□□ -0.33
CACNB3-210ENST00000548874 DDTP30046 118 aa12.95□□□□□ -0.34
CACNB3-210ENST00000548874 TAL2Q16559 108 aa12.95□□□□□ -0.34
CACNB3-210ENST00000548874 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
CACNB3-210ENST00000548874 C12orf57Q99622 126 aa12.95□□□□□ -0.34
CACNB3-210ENST00000548874 KCNQ1DNQ9H478 68 aa12.95□□□□□ -0.34
CACNB3-210ENST00000548874 PRO1933Q9H354 126 aa12.94□□□□□ -0.34
CACNB3-210ENST00000548874 A4D1N5 150 aa12.93□□□□□ -0.34
CACNB3-210ENST00000548874 PRYO14603 147 aa12.93□□□□□ -0.34
CACNB3-210ENST00000548874 S100A7L2Q5SY68 101 aa12.93□□□□□ -0.34
CACNB3-210ENST00000548874 REG3GQ6UW15 175 aa12.93□□□□□ -0.34
CACNB3-210ENST00000548874 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
CACNB3-210ENST00000548874 BCE1O60756 84 aa12.92□□□□□ -0.34
CACNB3-210ENST00000548874 IGLV7-43P04211 117 aa12.92□□□□□ -0.34
CACNB3-210ENST00000548874 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
CACNB3-210ENST00000548874 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
CACNB3-210ENST00000548874 SPRR1AP35321 89 aa12.9□□□□□ -0.34
CACNB3-210ENST00000548874 HSD52Q0P140 79 aa12.88□□□□□ -0.35
CACNB3-210ENST00000548874 CEND1Q8N111 149 aa12.88□□□□□ -0.35
CACNB3-210ENST00000548874 OR13C6PQ8NH95 151 aa12.88□□□□□ -0.35
CACNB3-210ENST00000548874 TRAV23DV6A0A075B6W5 121 aa12.87□□□□□ -0.35
CACNB3-210ENST00000548874 KRTAP13-1Q8IUC0 172 aa12.87□□□□□ -0.35
CACNB3-210ENST00000548874 TRAV13-2A0A0B4J235 113 aa12.86□□□□□ -0.35
CACNB3-210ENST00000548874 KRTAP4-16G5E9R7 235 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-210ENST00000548874 CBY1Q9Y3M2 126 aa12.86□□□□□ -0.35
CACNB3-210ENST00000548874 ABCA13Q86UQ4 5058 aa12.84□□□□□ -0.35
CACNB3-210ENST00000548874 A6NDN8 102 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms