RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 COX17Q14061 63 aa10.91□□□□□ -0.66
KRT4-201ENST00000548097 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
KRT4-201ENST00000548097 CBY1Q9Y3M2 126 aa10.91□□□□□ -0.66
KRT4-201ENST00000548097 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
KRT4-201ENST00000548097 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.66
KRT4-201ENST00000548097 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.66
KRT4-201ENST00000548097 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
KRT4-201ENST00000548097 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
KRT4-201ENST00000548097 CIRBPQ14011 172 aaKnown RBP10.88□□□□□ -0.67
KRT4-201ENST00000548097 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
KRT4-201ENST00000548097 Q8NDZ9 215 aa10.87□□□□□ -0.67
KRT4-201ENST00000548097 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 Q6ZSA8 131 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 A0A087WYN8 130 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 SERTAD4-AS1Q5TG53 156 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 C2orf91Q6ZV80 131 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
KRT4-201ENST00000548097 KRTAP7-1Q8IUC3 87 aa10.86□□□□□ -0.67
KRT4-201ENST00000548097 TIMM17BO60830 172 aa10.85□□□□□ -0.67
KRT4-201ENST00000548097 SCXQ7RTU7 201 aa10.85□□□□□ -0.67
KRT4-201ENST00000548097 PKIGQ9Y2B9 76 aa10.85□□□□□ -0.67
KRT4-201ENST00000548097 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
KRT4-201ENST00000548097 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
KRT4-201ENST00000548097 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
KRT4-201ENST00000548097 UBE2V1Q13404 147 aa10.84□□□□□ -0.67
KRT4-201ENST00000548097 PRR3P79522 188 aaKnown RBP10.83□□□□□ -0.68
KRT4-201ENST00000548097 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
KRT4-201ENST00000548097 LINC00474Q9P2X8 69 aa10.83□□□□□ -0.68
KRT4-201ENST00000548097 APOBP04114 4563 aaKnown RBP10.83□□□□□ -0.68
KRT4-201ENST00000548097 XGP55808 180 aa10.81□□□□□ -0.68
KRT4-201ENST00000548097 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
KRT4-201ENST00000548097 SPANXDQ9BXN6 97 aa10.81□□□□□ -0.68
KRT4-201ENST00000548097 SPANXCQ9NY87 97 aa10.81□□□□□ -0.68
KRT4-201ENST00000548097 MUSTN1Q8IVN3 82 aa10.81□□□□□ -0.68
KRT4-201ENST00000548097 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
KRT4-201ENST00000548097 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
KRT4-201ENST00000548097 SPANXB1Q9NS25 103 aaPredicted RBP10.79□□□□□ -0.68
KRT4-201ENST00000548097 VPREB1P12018 145 aa10.78□□□□□ -0.68
KRT4-201ENST00000548097 PLAC8Q9NZF1 115 aa10.78□□□□□ -0.68
KRT4-201ENST00000548097 NCR3O14931 201 aa10.77□□□□□ -0.68
KRT4-201ENST00000548097 HIGD1BQ9P298 99 aa10.77□□□□□ -0.68
KRT4-201ENST00000548097 C22orf24Q9Y442 160 aa10.77□□□□□ -0.68
KRT4-201ENST00000548097 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.69
KRT4-201ENST00000548097 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
KRT4-201ENST00000548097 M0QXV9 152 aa10.77□□□□□ -0.69
KRT4-201ENST00000548097 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.69
KRT4-201ENST00000548097 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
KRT4-201ENST00000548097 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
KRT4-201ENST00000548097 Q6ZVH6 145 aa10.74□□□□□ -0.69
KRT4-201ENST00000548097 NKAPP1Q8N9T2 125 aa10.74□□□□□ -0.69
KRT4-201ENST00000548097 PLA2G2DQ9UNK4 145 aa10.74□□□□□ -0.69
KRT4-201ENST00000548097 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
KRT4-201ENST00000548097 KRTAP11-1Q8IUC1 163 aa10.74□□□□□ -0.69
KRT4-201ENST00000548097 IFITM1P13164 125 aa10.73□□□□□ -0.69
KRT4-201ENST00000548097 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
KRT4-201ENST00000548097 VAMP3Q15836 100 aa10.73□□□□□ -0.69
KRT4-201ENST00000548097 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 TAX1BP3O14907 124 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
KRT4-201ENST00000548097 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
KRT4-201ENST00000548097 A4D1N5 150 aa10.71□□□□□ -0.69
KRT4-201ENST00000548097 LINC00167Q96N53 147 aa10.71□□□□□ -0.69
KRT4-201ENST00000548097 HSPG2P98160 4391 aa10.71□□□□□ -0.7
KRT4-201ENST00000548097 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 RYR1P21817 5038 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 BIRC6Q9NR09 4857 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 NDUFC2O95298 119 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 CEND1Q8N111 149 aa10.7□□□□□ -0.7
KRT4-201ENST00000548097 FXYD2P54710 66 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 UBE2BP63146 152 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 COPS9Q8WXC6 57 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 M0R378 163 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 HSD52Q0P140 79 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 LINC00337Q8N6G1 96 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 KRTAP17-1Q9BYP8 105 aa10.68□□□□□ -0.7
KRT4-201ENST00000548097 TAL2Q16559 108 aa10.67□□□□□ -0.7
KRT4-201ENST00000548097 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
KRT4-201ENST00000548097 A6NDN8 102 aa10.66□□□□□ -0.7
KRT4-201ENST00000548097 PCP4P48539 62 aa10.65□□□□□ -0.7
KRT4-201ENST00000548097 OR13C6PQ8NH95 151 aa10.65□□□□□ -0.7
KRT4-201ENST00000548097 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.71
KRT4-201ENST00000548097 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.71
KRT4-201ENST00000548097 FAT1Q14517 4588 aa10.64□□□□□ -0.71
KRT4-201ENST00000548097 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
KRT4-201ENST00000548097 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
KRT4-201ENST00000548097 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
KRT4-201ENST00000548097 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
KRT4-201ENST00000548097 CFC1P0CG37 223 aa10.63□□□□□ -0.71
KRT4-201ENST00000548097 GTF2H5Q6ZYL4 71 aa10.63□□□□□ -0.71
KRT4-201ENST00000548097 VPS13BQ7Z7G8 4022 aa10.62□□□□□ -0.71
KRT4-201ENST00000548097 PSORS1C2Q9UIG4 136 aa10.62□□□□□ -0.71
KRT4-201ENST00000548097 IGLV6-57P01721 117 aa10.61□□□□□ -0.71
KRT4-201ENST00000548097 C9orf118A6NHY6 69 aa10.6□□□□□ -0.71
KRT4-201ENST00000548097 K7ERJ3 54 aa10.6□□□□□ -0.71
KRT4-201ENST00000548097 K7ERU9 68 aa10.6□□□□□ -0.71
KRT4-201ENST00000548097 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms