RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 HMGN2P05204 90 aaKnown RBP0.27□□□□□ -2.37
CPNE8-205ENST00000547417 COX8AP10176 69 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 PEA15Q15121 130 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 MUSTN1Q8IVN3 82 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 C20orf78Q9BR46 151 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 PSENENQ9NZ42 101 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 U3KQA8 63 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 ALKQ9UM73 1620 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 RGPD3A6NKT7 1758 aaPredicted RBP0.27□□□□□ -2.37
CPNE8-205ENST00000547417 WNK2Q9Y3S1 2297 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 K7EP34 96 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 K7EQZ3 153 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 LEPROTL1O95214 131 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 DEFB109BQ30KR1 87 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 C9orf62Q8N4C0 152 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 HIGD1BQ9P298 99 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 RABAC1Q9UI14 185 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 BSNQ9UPA5 3926 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 PPLO60437 1756 aa0.26□□□□□ -2.37
CPNE8-205ENST00000547417 TENM2Q9NT68 2774 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 MAP3K4Q9Y6R4 1608 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 LRRC9Q6ZRR7 1453 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 SPRR1AP35321 89 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 UBE2D4Q9Y2X8 147 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 ANKRD36A6QL64 1941 aa0.25□□□□□ -2.37
CPNE8-205ENST00000547417 TSC2P49815 1807 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 UBR1Q8IWV7 1749 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 KIF14Q15058 1648 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 MAP1BP46821 2468 aaKnown RBP0.24□□□□□ -2.37
CPNE8-205ENST00000547417 UACAQ9BZF9 1416 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 NMSQ5H8A3 153 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 S100A16Q96FQ6 103 aaKnown RBP0.24□□□□□ -2.37
CPNE8-205ENST00000547417 PKD1L3Q7Z443 1732 aa0.24□□□□□ -2.37
CPNE8-205ENST00000547417 AKAP13Q12802 2813 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 SLIT1O75093 1534 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 MED14O60244 1454 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 ATP7BP35670 1465 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.23□□□□□ -2.37
CPNE8-205ENST00000547417 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 CYB5AP00167 134 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 SPRR1BP22528 89 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 SNRPFP62306 86 aaKnown RBP0.23□□□□□ -2.37
CPNE8-205ENST00000547417 PLGLAQ15195 96 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 TNXBP22105 4242 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 MYCBP2O75592 4640 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 PRRC2CQ9Y520 2896 aaKnown RBP0.23□□□□□ -2.37
CPNE8-205ENST00000547417 NEXMIFQ5QGS0 1516 aa0.23□□□□□ -2.37
CPNE8-205ENST00000547417 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 NKTRP30414 1462 aaKnown RBP0.22□□□□□ -2.37
CPNE8-205ENST00000547417 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
CPNE8-205ENST00000547417 EP300Q09472 2414 aaPredicted RBP0.22□□□□□ -2.37
CPNE8-205ENST00000547417 CNOT1A5YKK6 2376 aaKnown RBP0.22□□□□□ -2.37
CPNE8-205ENST00000547417 IGLC2P0DOY2 106 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 IGLC3P0DOY3 106 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 LINC00643Q86TS7 51 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 SCRIBQ14160 1630 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 KIF20BQ96Q89 1820 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 MAGI2Q86UL8 1455 aa0.22□□□□□ -2.37
CPNE8-205ENST00000547417 LPAP08519 4548 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 ALMS1Q8TCU4 4167 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 SPINK4O60575 86 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 ACYP1P07311 99 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 HECTD4Q9Y4D8 3996 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 CCDC18Q5T9S5 1454 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 QSER1Q2KHR3 1735 aa0.21□□□□□ -2.38
CPNE8-205ENST00000547417 WNK1Q9H4A3 2382 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 COL14A1Q05707 1796 aaKnown RBP0.2□□□□□ -2.38
CPNE8-205ENST00000547417 COL6A3P12111 3177 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 SPTY2D1-AS1A0A0U1RR47 76 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 MYMXA0A1B0GTQ4 84 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 A0A1B0GUT8 65 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 I3L3M4 83 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 FMN2Q9NZ56 1722 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 CLIP1P30622 1438 aa0.2□□□□□ -2.38
CPNE8-205ENST00000547417 FLNBO75369 2602 aaKnown RBP0.19□□□□□ -2.38
CPNE8-205ENST00000547417 HECTD1Q9ULT8 2610 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 KANTRA0A1W2PQU2 76 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 IQCF6A8MYZ5 107 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 CCL22O00626 93 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 DEFB105AQ8NG35 78 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 TMEM131LA2VDJ0 1609 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 APC2O95996 2303 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 ZANQ9Y493 2812 aa0.19□□□□□ -2.38
CPNE8-205ENST00000547417 SUPT6HQ7KZ85 1726 aaKnown RBP0.18□□□□□ -2.38
CPNE8-205ENST00000547417 LRRC7Q96NW7 1537 aa0.18□□□□□ -2.38
CPNE8-205ENST00000547417 CPSF4LA6NMK7 179 aaKnown RBP0.18□□□□□ -2.38
CPNE8-205ENST00000547417 RPL38P63173 70 aaKnown RBP0.18□□□□□ -2.38
CPNE8-205ENST00000547417 DEFB112Q30KQ8 113 aa0.18□□□□□ -2.38
CPNE8-205ENST00000547417 TGP01266 2768 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 NDUFB1O75438 58 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 TDRG1Q3Y452 100 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 FXYD6Q9H0Q3 95 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 CREBBPQ92793 2442 aa0.17□□□□□ -2.38
CPNE8-205ENST00000547417 URB2Q14146 1524 aaKnown RBP0.17□□□□□ -2.38
CPNE8-205ENST00000547417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.17□□□□□ -2.38
CPNE8-205ENST00000547417 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
CPNE8-205ENST00000547417 HTTP42858 3142 aa0.16□□□□□ -2.38
CPNE8-205ENST00000547417 UBR3Q6ZT12 1888 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms