RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 A0A0U1RRA0 63 aa10.41□□□□□ -0.74
CCDC38-203ENST00000546803 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
CCDC38-203ENST00000546803 UBE2BP63146 152 aa10.41□□□□□ -0.74
CCDC38-203ENST00000546803 MRPL55Q7Z7F7 128 aaKnown RBP10.41□□□□□ -0.74
CCDC38-203ENST00000546803 PSORS1C2Q9UIG4 136 aa10.41□□□□□ -0.74
CCDC38-203ENST00000546803 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
CCDC38-203ENST00000546803 HNRNPA3P51991 378 aaKnown RBP10.39□□□□□ -0.75
CCDC38-203ENST00000546803 MIR7-3HGQ8N6C7 128 aa10.39□□□□□ -0.75
CCDC38-203ENST00000546803 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
CCDC38-203ENST00000546803 VPREB1P12018 145 aa10.37□□□□□ -0.75
CCDC38-203ENST00000546803 C1orf137Q5JT78 98 aa10.37□□□□□ -0.75
CCDC38-203ENST00000546803 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
CCDC38-203ENST00000546803 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
CCDC38-203ENST00000546803 LINC00167Q96N53 147 aa10.36□□□□□ -0.75
CCDC38-203ENST00000546803 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
CCDC38-203ENST00000546803 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
CCDC38-203ENST00000546803 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
CCDC38-203ENST00000546803 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC38-203ENST00000546803 SPINK6Q6UWN8 80 aa10.34□□□□□ -0.75
CCDC38-203ENST00000546803 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
CCDC38-203ENST00000546803 IGLV7-43P04211 117 aa10.33□□□□□ -0.76
CCDC38-203ENST00000546803 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
CCDC38-203ENST00000546803 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
CCDC38-203ENST00000546803 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
CCDC38-203ENST00000546803 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
CCDC38-203ENST00000546803 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
CCDC38-203ENST00000546803 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
CCDC38-203ENST00000546803 TIMM17BO60830 172 aa10.32□□□□□ -0.76
CCDC38-203ENST00000546803 Q8NDZ9 215 aa10.32□□□□□ -0.76
CCDC38-203ENST00000546803 RPL37AP8A6NKH3 93 aa10.31□□□□□ -0.76
CCDC38-203ENST00000546803 OXTP01178 125 aa10.31□□□□□ -0.76
CCDC38-203ENST00000546803 DAND5Q8N907 189 aa10.31□□□□□ -0.76
CCDC38-203ENST00000546803 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
CCDC38-203ENST00000546803 KRTAP29-1A8MX34 341 aaPredicted RBP10.3□□□□□ -0.76
CCDC38-203ENST00000546803 HSBP1L1C9JCN9 74 aa10.3□□□□□ -0.76
CCDC38-203ENST00000546803 M0R378 163 aa10.3□□□□□ -0.76
CCDC38-203ENST00000546803 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
CCDC38-203ENST00000546803 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
CCDC38-203ENST00000546803 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
CCDC38-203ENST00000546803 ABCA13Q86UQ4 5058 aa10.29□□□□□ -0.76
CCDC38-203ENST00000546803 BCE1O60756 84 aa10.28□□□□□ -0.76
CCDC38-203ENST00000546803 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
CCDC38-203ENST00000546803 LITAFQ99732 161 aa10.28□□□□□ -0.76
CCDC38-203ENST00000546803 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
CCDC38-203ENST00000546803 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
CCDC38-203ENST00000546803 NDUFC2O95298 119 aa10.26□□□□□ -0.77
CCDC38-203ENST00000546803 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
CCDC38-203ENST00000546803 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
CCDC38-203ENST00000546803 DIRC1Q969H9 104 aa10.26□□□□□ -0.77
CCDC38-203ENST00000546803 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-203ENST00000546803 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
CCDC38-203ENST00000546803 ZNF861PO60384 105 aa10.25□□□□□ -0.77
CCDC38-203ENST00000546803 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
CCDC38-203ENST00000546803 J3QL48 77 aa10.24□□□□□ -0.77
CCDC38-203ENST00000546803 NCR3O14931 201 aa10.24□□□□□ -0.77
CCDC38-203ENST00000546803 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
CCDC38-203ENST00000546803 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
CCDC38-203ENST00000546803 PCLOQ9Y6V0 5065 aa10.24□□□□□ -0.77
CCDC38-203ENST00000546803 TMEM238C9JI98 176 aa10.23□□□□□ -0.77
CCDC38-203ENST00000546803 RPL28P46779 137 aaKnown RBP10.23□□□□□ -0.77
CCDC38-203ENST00000546803 NPC2P61916 151 aa10.22□□□□□ -0.77
CCDC38-203ENST00000546803 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
CCDC38-203ENST00000546803 TMEM126AQ9H061 195 aa10.22□□□□□ -0.77
CCDC38-203ENST00000546803 TMA7Q9Y2S6 64 aaKnown RBP10.22□□□□□ -0.77
CCDC38-203ENST00000546803 H0Y9J4 135 aa10.21□□□□□ -0.77
CCDC38-203ENST00000546803 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.77
CCDC38-203ENST00000546803 Q6ZVH6 145 aa10.21□□□□□ -0.77
CCDC38-203ENST00000546803 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
CCDC38-203ENST00000546803 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
CCDC38-203ENST00000546803 PRYO14603 147 aa10.2□□□□□ -0.78
CCDC38-203ENST00000546803 UBE2AP49459 152 aa10.2□□□□□ -0.78
CCDC38-203ENST00000546803 S100A12P80511 92 aa10.2□□□□□ -0.78
CCDC38-203ENST00000546803 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-203ENST00000546803 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
CCDC38-203ENST00000546803 TRBV10-3A0A0K0K1G6 114 aa10.19□□□□□ -0.78
CCDC38-203ENST00000546803 IFITM1P13164 125 aa10.19□□□□□ -0.78
CCDC38-203ENST00000546803 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
CCDC38-203ENST00000546803 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
CCDC38-203ENST00000546803 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
CCDC38-203ENST00000546803 DDTP30046 118 aa10.17□□□□□ -0.78
CCDC38-203ENST00000546803 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
CCDC38-203ENST00000546803 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
CCDC38-203ENST00000546803 KRTAP13-1Q8IUC0 172 aa10.17□□□□□ -0.78
CCDC38-203ENST00000546803 IGLV6-57P01721 117 aa10.15□□□□□ -0.78
CCDC38-203ENST00000546803 SPRR1AP35321 89 aa10.15□□□□□ -0.78
CCDC38-203ENST00000546803 LINC00518Q8N0U6 118 aa10.15□□□□□ -0.78
CCDC38-203ENST00000546803 CBY1Q9Y3M2 126 aa10.15□□□□□ -0.78
CCDC38-203ENST00000546803 COX8AP10176 69 aa10.14□□□□□ -0.79
CCDC38-203ENST00000546803 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
CCDC38-203ENST00000546803 DLEU1O43261 78 aa10.13□□□□□ -0.79
CCDC38-203ENST00000546803 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
CCDC38-203ENST00000546803 PRLHP81277 87 aa10.13□□□□□ -0.79
CCDC38-203ENST00000546803 VAMP8Q9BV40 100 aa10.13□□□□□ -0.79
CCDC38-203ENST00000546803 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
CCDC38-203ENST00000546803 PAM16Q9Y3D7 125 aa10.12□□□□□ -0.79
CCDC38-203ENST00000546803 MYCBP2O75592 4640 aa10.12□□□□□ -0.79
CCDC38-203ENST00000546803 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
CCDC38-203ENST00000546803 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
CCDC38-203ENST00000546803 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
CCDC38-203ENST00000546803 SPATA45Q537H7 98 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms