RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 M0QXV9 152 aa12.38□□□□□ -0.43
LTBP4-206ENST00000546155 HERV-K104P63124 156 aa12.38□□□□□ -0.43
LTBP4-206ENST00000546155 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
LTBP4-206ENST00000546155 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
LTBP4-206ENST00000546155 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
LTBP4-206ENST00000546155 MYMXA0A1B0GTQ4 84 aa12.36□□□□□ -0.43
LTBP4-206ENST00000546155 C5orf52A6NGY3 159 aa12.36□□□□□ -0.43
LTBP4-206ENST00000546155 SNRPEP62304 92 aaKnown RBP12.36□□□□□ -0.43
LTBP4-206ENST00000546155 UBE2BP63146 152 aa12.36□□□□□ -0.43
LTBP4-206ENST00000546155 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
LTBP4-206ENST00000546155 S100A2P29034 98 aa12.35□□□□□ -0.43
LTBP4-206ENST00000546155 NMUP48645 174 aa12.35□□□□□ -0.43
LTBP4-206ENST00000546155 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
LTBP4-206ENST00000546155 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
LTBP4-206ENST00000546155 IGLV5-37A0A075B6J1 123 aa12.33□□□□□ -0.44
LTBP4-206ENST00000546155 C20orf202A1L168 122 aa12.33□□□□□ -0.44
LTBP4-206ENST00000546155 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
LTBP4-206ENST00000546155 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
LTBP4-206ENST00000546155 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
LTBP4-206ENST00000546155 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
LTBP4-206ENST00000546155 LINC00158P58513 81 aa12.31□□□□□ -0.44
LTBP4-206ENST00000546155 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
LTBP4-206ENST00000546155 IGLV7-43P04211 117 aa12.3□□□□□ -0.44
LTBP4-206ENST00000546155 AKR1D1P51857 326 aa12.3□□□□□ -0.44
LTBP4-206ENST00000546155 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
LTBP4-206ENST00000546155 IGKV2D-26A0A0A0MRZ7 120 aa12.29□□□□□ -0.44
LTBP4-206ENST00000546155 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
LTBP4-206ENST00000546155 VPREB1P12018 145 aa12.28□□□□□ -0.44
LTBP4-206ENST00000546155 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
LTBP4-206ENST00000546155 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
LTBP4-206ENST00000546155 Q8NDZ9 215 aa12.28□□□□□ -0.44
LTBP4-206ENST00000546155 MIR7-3HGQ8N6C7 128 aa12.27□□□□□ -0.45
LTBP4-206ENST00000546155 ATOH7Q8N100 152 aa12.26□□□□□ -0.45
LTBP4-206ENST00000546155 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
LTBP4-206ENST00000546155 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
LTBP4-206ENST00000546155 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
LTBP4-206ENST00000546155 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
LTBP4-206ENST00000546155 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
LTBP4-206ENST00000546155 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
LTBP4-206ENST00000546155 RPL24P83731 157 aaKnown RBP12.23□□□□□ -0.45
LTBP4-206ENST00000546155 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
LTBP4-206ENST00000546155 DIRC1Q969H9 104 aa12.23□□□□□ -0.45
LTBP4-206ENST00000546155 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
LTBP4-206ENST00000546155 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
LTBP4-206ENST00000546155 KRTAP10-8P60410 259 aa12.21□□□□□ -0.45
LTBP4-206ENST00000546155 DAND5Q8N907 189 aa12.21□□□□□ -0.45
LTBP4-206ENST00000546155 LITAFQ99732 161 aa12.21□□□□□ -0.45
LTBP4-206ENST00000546155 ZNF815PA8K554 130 aa12.2□□□□□ -0.46
LTBP4-206ENST00000546155 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
LTBP4-206ENST00000546155 TIMM17BO60830 172 aa12.19□□□□□ -0.46
LTBP4-206ENST00000546155 H0Y9J4 135 aa12.18□□□□□ -0.46
LTBP4-206ENST00000546155 BOD1L2Q8IYS8 172 aa12.18□□□□□ -0.46
LTBP4-206ENST00000546155 IGLV1-50A0A075B6I6 118 aa12.17□□□□□ -0.46
LTBP4-206ENST00000546155 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
LTBP4-206ENST00000546155 TNXBP22105 4242 aa12.16□□□□□ -0.46
LTBP4-206ENST00000546155 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
LTBP4-206ENST00000546155 PCP2Q8IVA1 136 aa12.15□□□□□ -0.46
LTBP4-206ENST00000546155 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
LTBP4-206ENST00000546155 M0R378 163 aa12.14□□□□□ -0.47
LTBP4-206ENST00000546155 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
LTBP4-206ENST00000546155 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
LTBP4-206ENST00000546155 ZNF861PO60384 105 aa12.13□□□□□ -0.47
LTBP4-206ENST00000546155 IGKV2-28A0A075B6P5 120 aa12.12□□□□□ -0.47
LTBP4-206ENST00000546155 BCE1O60756 84 aa12.12□□□□□ -0.47
LTBP4-206ENST00000546155 IGKV2D-28P01615 120 aa12.12□□□□□ -0.47
LTBP4-206ENST00000546155 NDUFC2O95298 119 aa12.11□□□□□ -0.47
LTBP4-206ENST00000546155 HSBP1L1C9JCN9 74 aa12.1□□□□□ -0.47
LTBP4-206ENST00000546155 LINC00308Q8TCZ7 52 aa12.1□□□□□ -0.47
LTBP4-206ENST00000546155 MIEN1Q9BRT3 115 aa12.1□□□□□ -0.47
LTBP4-206ENST00000546155 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
LTBP4-206ENST00000546155 NCR3O14931 201 aa12.09□□□□□ -0.47
LTBP4-206ENST00000546155 KRTAP1-4P0C5Y4 121 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 JOSD1Q15040 202 aaPredicted RBP12.08□□□□□ -0.48
LTBP4-206ENST00000546155 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 SPANXCQ9NY87 97 aa12.08□□□□□ -0.48
LTBP4-206ENST00000546155 TMA7Q9Y2S6 64 aaKnown RBP12.08□□□□□ -0.48
LTBP4-206ENST00000546155 TMEM238C9JI98 176 aa12.07□□□□□ -0.48
LTBP4-206ENST00000546155 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
LTBP4-206ENST00000546155 NPC2P61916 151 aa12.07□□□□□ -0.48
LTBP4-206ENST00000546155 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
LTBP4-206ENST00000546155 KCNQ1DNQ9H478 68 aa12.06□□□□□ -0.48
LTBP4-206ENST00000546155 UBE2AP49459 152 aa12.05□□□□□ -0.48
LTBP4-206ENST00000546155 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
LTBP4-206ENST00000546155 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
LTBP4-206ENST00000546155 Q6ZVH6 145 aa12.04□□□□□ -0.48
LTBP4-206ENST00000546155 PRYO14603 147 aa12.03□□□□□ -0.48
LTBP4-206ENST00000546155 SPRR1AP35321 89 aa12.03□□□□□ -0.48
LTBP4-206ENST00000546155 IGLV6-57P01721 117 aa12.02□□□□□ -0.49
LTBP4-206ENST00000546155 IFITM1P13164 125 aa12.01□□□□□ -0.49
LTBP4-206ENST00000546155 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
LTBP4-206ENST00000546155 COX8AP10176 69 aa12□□□□□ -0.49
LTBP4-206ENST00000546155 DDTP30046 118 aa12□□□□□ -0.49
LTBP4-206ENST00000546155 PRLHP81277 87 aa12□□□□□ -0.49
LTBP4-206ENST00000546155 FAM19A1Q7Z5A9 133 aa12□□□□□ -0.49
LTBP4-206ENST00000546155 ANAPC11Q9NYG5 84 aa11.99□□□□□ -0.49
LTBP4-206ENST00000546155 DLEU1O43261 78 aa11.98□□□□□ -0.49
LTBP4-206ENST00000546155 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms