RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	PFN2	P35080	140 aa		4.05	□□□□□ -1.76
TAF1D-222	ENST00000546088	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.05	□□□□□ -1.76
TAF1D-222	ENST00000546088	LINC01561	Q8N1V8	128 aa		4.05	□□□□□ -1.76
TAF1D-222	ENST00000546088	MAP1LC3C	Q9BXW4	147 aa		4.05	□□□□□ -1.76
TAF1D-222	ENST00000546088	XAGE1A	Q9HD64	81 aa		4.05	□□□□□ -1.76
TAF1D-222	ENST00000546088	CIRBP	Q14011	172 aa	Known RBP	4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	TRBV30	A0A0K0K1B3	111 aa		4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	TMEM223	A0PJW6	202 aa		4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	KRTDAP	P60985	99 aa		4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	C9orf129	Q5T035	196 aa	Known RBP	4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	PHF5A	Q7RTV0	110 aa	Known RBP	4.04	□□□□□ -1.76
TAF1D-222	ENST00000546088	IGKV2D-30	A0A075B6S6	120 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	IGLV5-39	A0A0G2JS06	123 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	NDUFC2-KCTD14	E9PQ53	114 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	SYS1-DBNDD2	H3BUS1	97 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	IGKC	P01834	107 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	C3orf79	P0CE67	100 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	RPL37A	P61513	92 aa	Known RBP	4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	PLAC8	Q9NZF1	115 aa		4.03	□□□□□ -1.76
TAF1D-222	ENST00000546088	VPS13B	Q7Z7G8	4022 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088		F8WDY8	70 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	DPM2	O94777	84 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	HNRNPA3	P51991	378 aa	Known RBP	4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	TSPEAR-AS2	P59090	65 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	SERTAD4-AS1	Q5TG53	156 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	KRTAP7-1	Q8IUC3	87 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	ATOH7	Q8N100	152 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	ABCA13	Q86UQ4	5058 aa		4.02	□□□□□ -1.77
TAF1D-222	ENST00000546088	TLX1NB	P0CAT3	122 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	INAFM2	P0DMQ5	153 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	CXCL5	P42830	114 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	COA6	Q5JTJ3	125 aa	Known RBP	4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	LINC00474	Q9P2X8	69 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	SRRM2	Q9UQ35	2752 aa	Known RBP	4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	S100A6	P06703	90 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	PLN	P26678	52 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	KRTAP10-4	P60372	401 aa	Predicted RBP	4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	SNRPE	P62304	92 aa	Known RBP	4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	KRTAP11-1	Q8IUC1	163 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	C7orf33	Q8WU49	177 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	ERG28	Q9UKR5	140 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	PKIG	Q9Y2B9	76 aa		4.01	□□□□□ -1.77
TAF1D-222	ENST00000546088	GAGE10	A6NGK3	116 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088		M0QXV9	152 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	SMIM13	P0DJ93	91 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	S100A2	P29034	98 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	LINC00158	P58513	81 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	MEIG1	Q5JSS6	88 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	HIST3H2BB	Q8N257	126 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	TTTY13	Q9BZ97	58 aa		4	□□□□□ -1.77
TAF1D-222	ENST00000546088	LEPROT	O15243	131 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	UBE2B	P63146	152 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	LINC01545	Q5VT33	79 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	DAND5	Q8N907	189 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	HIST1H2BL	Q99880	126 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	NDUFA12	Q9UI09	145 aa		3.99	□□□□□ -1.77
TAF1D-222	ENST00000546088	IGKV2D-26	A0A0A0MRZ7	120 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	RPL37AP8	A6NKH3	93 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088		J3QQQ9	107 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	LGALS3	P17931	250 aa	Known RBP	3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	HERVK_113	P61574	105 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	NPC2	P61916	151 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	PET117	Q6UWS5	81 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088		Q8NDZ9	215 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	SND1-IT1	Q9HBX3	110 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	C22orf24	Q9Y442	160 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	FLG2	Q5D862	2391 aa	Predicted RBP	3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	PRR3	P79522	188 aa	Known RBP	3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	C1orf137	Q5JT78	98 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	MIR7-3HG	Q8N6C7	128 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	PSORS1C2	Q9UIG4	136 aa		3.98	□□□□□ -1.77
TAF1D-222	ENST00000546088	MYMX	A0A1B0GTQ4	84 aa		3.97	□□□□□ -1.77
TAF1D-222	ENST00000546088	LOC105371267	A0A1B0GV96	52 aa		3.97	□□□□□ -1.77
TAF1D-222	ENST00000546088	PLEKHB2	Q96CS7	222 aa		3.97	□□□□□ -1.77
TAF1D-222	ENST00000546088	IGKV2-28	A0A075B6P5	120 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	C20orf202	A1L168	122 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	C5orf52	A6NGY3	159 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088		E9PLD3	99 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	IGKV2D-28	P01615	120 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	NMU	P48645	174 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	LINC00167	Q96N53	147 aa		3.96	□□□□□ -1.78
TAF1D-222	ENST00000546088	MYCBP2	O75592	4640 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	NCR3	O14931	201 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	MRPL55	Q7Z7F7	128 aa	Known RBP	3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	NKAPP1	Q8N9T2	125 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088		A0A0J9YXY3	114 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	ZNF815P	A8K554	130 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	SCGB1D1	O95968	90 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	VPREB1	P12018	145 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	HERV-K104	P63124	156 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	COX17	Q14061	63 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	ADAMTSL4-AS1	Q5T5F5	129 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	BOD1L2	Q8IYS8	172 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	TP73-AS1	Q9UF72	201 aa		3.95	□□□□□ -1.78
TAF1D-222	ENST00000546088	LRP1	Q07954	4544 aa	Known RBP	3.94	□□□□□ -1.78
TAF1D-222	ENST00000546088	SFTA2	Q6UW10	78 aa		3.94	□□□□□ -1.78
TAF1D-222	ENST00000546088	PCP2	Q8IVA1	136 aa		3.94	□□□□□ -1.78
TAF1D-222	ENST00000546088	TMEM238	C9JI98	176 aa		3.93	□□□□□ -1.78
TAF1D-222	ENST00000546088	MT3	P25713	68 aa		3.93	□□□□□ -1.78
TAF1D-222	ENST00000546088	PKHD1L1	Q86WI1	4243 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms