RNA–Protein interactions for RNA: ENST00000545825.1

CCDC189-211, Transcript of coiled-coil domain containing 189, humanhuman

TSL 1 (best) BASIC

Gene CCDC189, Length 1,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-211ENST00000545825 LINC00158P58513 81 aa13.64□□□□□ -0.23
CCDC189-211ENST00000545825 IGKCP01834 107 aa13.63□□□□□ -0.23
CCDC189-211ENST00000545825 VPREB1P12018 145 aa13.63□□□□□ -0.23
CCDC189-211ENST00000545825 TSPEAR-AS2P59090 65 aa13.63□□□□□ -0.23
CCDC189-211ENST00000545825 KRTAP10-8P60410 259 aa13.63□□□□□ -0.23
CCDC189-211ENST00000545825 NDUFA12Q9UI09 145 aa13.63□□□□□ -0.23
CCDC189-211ENST00000545825 A0A0U1RRA0 63 aa13.62□□□□□ -0.23
CCDC189-211ENST00000545825 Q8NDZ9 215 aa13.62□□□□□ -0.23
CCDC189-211ENST00000545825 TNXBP22105 4242 aa13.61□□□□□ -0.23
CCDC189-211ENST00000545825 LEPROTO15243 131 aa13.61□□□□□ -0.23
CCDC189-211ENST00000545825 HERV-K104P63124 156 aa13.61□□□□□ -0.23
CCDC189-211ENST00000545825 ZNF861PO60384 105 aa13.6□□□□□ -0.23
CCDC189-211ENST00000545825 SMIM13P0DJ93 91 aa13.6□□□□□ -0.23
CCDC189-211ENST00000545825 PLEKHB2Q96CS7 222 aa13.6□□□□□ -0.23
CCDC189-211ENST00000545825 MYMXA0A1B0GTQ4 84 aa13.59□□□□□ -0.23
CCDC189-211ENST00000545825 SYS1-DBNDD2H3BUS1 97 aa13.59□□□□□ -0.23
CCDC189-211ENST00000545825 BCE1O60756 84 aa13.59□□□□□ -0.23
CCDC189-211ENST00000545825 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
CCDC189-211ENST00000545825 MEIG1Q5JSS6 88 aa13.59□□□□□ -0.23
CCDC189-211ENST00000545825 COA6Q5JTJ3 125 aaKnown RBP13.59□□□□□ -0.23
CCDC189-211ENST00000545825 HERVK_113P61574 105 aa13.58□□□□□ -0.24
CCDC189-211ENST00000545825 J3QQQ9 107 aa13.57□□□□□ -0.24
CCDC189-211ENST00000545825 IGKV2-28A0A075B6P5 120 aa13.56□□□□□ -0.24
CCDC189-211ENST00000545825 IGKV2D-28P01615 120 aa13.56□□□□□ -0.24
CCDC189-211ENST00000545825 IGLV1-50A0A075B6I6 118 aa13.55□□□□□ -0.24
CCDC189-211ENST00000545825 LINC00587B1AMM8 73 aa13.55□□□□□ -0.24
CCDC189-211ENST00000545825 KRTAP1-4P0C5Y4 121 aa13.55□□□□□ -0.24
CCDC189-211ENST00000545825 MIR7-3HGQ8N6C7 128 aa13.55□□□□□ -0.24
CCDC189-211ENST00000545825 ATP6V1G1O75348 118 aa13.54□□□□□ -0.24
CCDC189-211ENST00000545825 S100A1P23297 94 aa13.53□□□□□ -0.24
CCDC189-211ENST00000545825 RPL28P46779 137 aaKnown RBP13.53□□□□□ -0.24
CCDC189-211ENST00000545825 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
CCDC189-211ENST00000545825 LGALS3P17931 250 aaKnown RBP13.52□□□□□ -0.25
CCDC189-211ENST00000545825 NMUP48645 174 aa13.52□□□□□ -0.25
CCDC189-211ENST00000545825 PET117Q6UWS5 81 aa13.52□□□□□ -0.25
CCDC189-211ENST00000545825 HMCN2Q8NDA2 5059 aa13.51□□□□□ -0.25
CCDC189-211ENST00000545825 PRR26Q8N8Z3 221 aa13.51□□□□□ -0.25
CCDC189-211ENST00000545825 E9PLD3 99 aa13.5□□□□□ -0.25
CCDC189-211ENST00000545825 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
CCDC189-211ENST00000545825 KRTAP13-1Q8IUC0 172 aa13.5□□□□□ -0.25
CCDC189-211ENST00000545825 BOD1L2Q8IYS8 172 aa13.5□□□□□ -0.25
CCDC189-211ENST00000545825 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
CCDC189-211ENST00000545825 TMEM126AQ9H061 195 aa13.48□□□□□ -0.25
CCDC189-211ENST00000545825 M0R378 163 aa13.47□□□□□ -0.25
CCDC189-211ENST00000545825 DAND5Q8N907 189 aa13.47□□□□□ -0.25
CCDC189-211ENST00000545825 UBE2AP49459 152 aa13.46□□□□□ -0.25
CCDC189-211ENST00000545825 KRTDAPP60985 99 aa13.45□□□□□ -0.26
CCDC189-211ENST00000545825 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
CCDC189-211ENST00000545825 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
CCDC189-211ENST00000545825 NCR3O14931 201 aa13.43□□□□□ -0.26
CCDC189-211ENST00000545825 IGKV2D-26A0A0A0MRZ7 120 aa13.42□□□□□ -0.26
CCDC189-211ENST00000545825 A0A0J9YXY3 114 aa13.42□□□□□ -0.26
CCDC189-211ENST00000545825 PRLHP81277 87 aa13.42□□□□□ -0.26
CCDC189-211ENST00000545825 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
CCDC189-211ENST00000545825 ADAMTSL4-AS1Q5T5F5 129 aa13.39□□□□□ -0.27
CCDC189-211ENST00000545825 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
CCDC189-211ENST00000545825 TRBV10-3A0A0K0K1G6 114 aa13.36□□□□□ -0.27
CCDC189-211ENST00000545825 C20orf202A1L168 122 aa13.36□□□□□ -0.27
CCDC189-211ENST00000545825 PRYO14603 147 aa13.36□□□□□ -0.27
CCDC189-211ENST00000545825 MIEN1Q9BRT3 115 aa13.36□□□□□ -0.27
CCDC189-211ENST00000545825 KCNQ1DNQ9H478 68 aa13.36□□□□□ -0.27
CCDC189-211ENST00000545825 A0A087X002 238 aa13.35□□□□□ -0.27
CCDC189-211ENST00000545825 EIF4EBP3O60516 100 aaPredicted RBP13.35□□□□□ -0.27
CCDC189-211ENST00000545825 SOSTDC1Q6X4U4 206 aa13.35□□□□□ -0.27
CCDC189-211ENST00000545825 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
CCDC189-211ENST00000545825 LITAFQ99732 161 aa13.34□□□□□ -0.27
CCDC189-211ENST00000545825 TTTY13Q9BZ97 58 aa13.34□□□□□ -0.27
CCDC189-211ENST00000545825 ZNF815PA8K554 130 aa13.33□□□□□ -0.28
CCDC189-211ENST00000545825 SPRR1AP35321 89 aa13.33□□□□□ -0.28
CCDC189-211ENST00000545825 NPC2P61916 151 aa13.33□□□□□ -0.28
CCDC189-211ENST00000545825 HIST3H2BBQ8N257 126 aa13.33□□□□□ -0.28
CCDC189-211ENST00000545825 SPANXB1Q9NS25 103 aaPredicted RBP13.33□□□□□ -0.28
CCDC189-211ENST00000545825 ANAPC11Q9NYG5 84 aa13.33□□□□□ -0.28
CCDC189-211ENST00000545825 NDUFC2O95298 119 aa13.32□□□□□ -0.28
CCDC189-211ENST00000545825 TIMM17BO60830 172 aa13.31□□□□□ -0.28
CCDC189-211ENST00000545825 CRYGAP11844 174 aa13.31□□□□□ -0.28
CCDC189-211ENST00000545825 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
CCDC189-211ENST00000545825 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
CCDC189-211ENST00000545825 KRTAP4-16G5E9R7 235 aaPredicted RBP13.3□□□□□ -0.28
CCDC189-211ENST00000545825 ANKRD39Q53RE8 183 aa13.3□□□□□ -0.28
CCDC189-211ENST00000545825 HIST1H2BLQ99880 126 aa13.3□□□□□ -0.28
CCDC189-211ENST00000545825 HIGD2AQ9BW72 106 aa13.3□□□□□ -0.28
CCDC189-211ENST00000545825 DDTP30046 118 aa13.29□□□□□ -0.28
CCDC189-211ENST00000545825 S100A2P29034 98 aa13.28□□□□□ -0.28
CCDC189-211ENST00000545825 AKR1D1P51857 326 aa13.27□□□□□ -0.29
CCDC189-211ENST00000545825 FAM229BQ4G0N7 80 aa13.27□□□□□ -0.29
CCDC189-211ENST00000545825 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.29
CCDC189-211ENST00000545825 IGLV6-57P01721 117 aa13.26□□□□□ -0.29
CCDC189-211ENST00000545825 S100A12P80511 92 aa13.26□□□□□ -0.29
CCDC189-211ENST00000545825 ETDCA0A1B0GVM5 59 aa13.25□□□□□ -0.29
CCDC189-211ENST00000545825 S100A6P06703 90 aa13.25□□□□□ -0.29
CCDC189-211ENST00000545825 KRTAP13-2Q52LG2 175 aa13.25□□□□□ -0.29
CCDC189-211ENST00000545825 S100A7L2Q5SY68 101 aa13.24□□□□□ -0.29
CCDC189-211ENST00000545825 TYMSOSQ8TAI1 123 aa13.24□□□□□ -0.29
CCDC189-211ENST00000545825 SPANXCQ9NY87 97 aa13.23□□□□□ -0.29
CCDC189-211ENST00000545825 B5MCH6 92 aa13.21□□□□□ -0.29
CCDC189-211ENST00000545825 SCGB1D4Q6XE38 83 aa13.21□□□□□ -0.29
CCDC189-211ENST00000545825 SMCR5Q8TEV8 140 aa13.21□□□□□ -0.29
CCDC189-211ENST00000545825 SPRR4Q96PI1 79 aa13.21□□□□□ -0.29
CCDC189-211ENST00000545825 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms