RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ANK3Q12955 4377 aaKnown RBP5.94□□□□□ -1.46
TDP1-204ENST00000545686 SETD2Q9BYW2 2564 aaPredicted RBP5.94□□□□□ -1.46
TDP1-204ENST00000545686 WFDC9Q8NEX5 89 aa5.93□□□□□ -1.46
TDP1-204ENST00000545686 DSCR8Q96T75 97 aa5.93□□□□□ -1.46
TDP1-204ENST00000545686 LAMTOR3Q9UHA4 124 aa5.93□□□□□ -1.46
TDP1-204ENST00000545686 FN1P02751 2386 aaKnown RBP5.93□□□□□ -1.46
TDP1-204ENST00000545686 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 CXCL6P80162 114 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 LELP1Q5T871 98 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 ZFYVE26Q68DK2 2539 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 C10orf25Q5T742 122 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 UNQ6190/PRO20217Q6UXQ8 127 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 PRR34Q9NV39 138 aa5.92□□□□□ -1.46
TDP1-204ENST00000545686 GCN1Q92616 2671 aaKnown RBP5.92□□□□□ -1.46
TDP1-204ENST00000545686 APOC4P55056 127 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
TDP1-204ENST00000545686 DAD1P61803 113 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 Q8N3U1 123 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 CCDC168Q8NDH2 2452 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 TRBV7-6A0A0J9YX20 115 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 CYSRT1A8MQ03 144 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.91□□□□□ -1.46
TDP1-204ENST00000545686 Q6ZQY7 126 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 Q6ZVQ6 151 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
TDP1-204ENST00000545686 OXTP01178 125 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 MIFP14174 115 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 DEFB135Q30KP9 77 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 KRTAP10-3P60369 221 aa5.89□□□□□ -1.47
TDP1-204ENST00000545686 FAM236DA0A1B0GTK5 79 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 FAM236CP0DP71 79 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 Q8NAQ8 132 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 COX7BP24311 80 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
TDP1-204ENST00000545686 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
TDP1-204ENST00000545686 M0R2N4 97 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 ZNF73O43830 326 aaPredicted RBP5.87□□□□□ -1.47
TDP1-204ENST00000545686 HAMPP81172 84 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 PDZD2O15018 2839 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 DEFB4AO15263 64 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 SPART-AS1P0CW21 52 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 SPATA3Q8NHX4 192 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 KLK12Q9UKR0 248 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 CELA1Q9UNI1 258 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 MTORP42345 2549 aa5.87□□□□□ -1.47
TDP1-204ENST00000545686 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
TDP1-204ENST00000545686 H7BZZ5 65 aa5.86□□□□□ -1.47
TDP1-204ENST00000545686 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
TDP1-204ENST00000545686 NBEAL2Q6ZNJ1 2754 aa5.85□□□□□ -1.47
TDP1-204ENST00000545686 ACANP16112 2415 aa5.85□□□□□ -1.47
TDP1-204ENST00000545686 WIPF1O43516 503 aa5.85□□□□□ -1.47
TDP1-204ENST00000545686 Q5XG85 94 aa5.85□□□□□ -1.47
TDP1-204ENST00000545686 NDUFC1O43677 76 aa5.84□□□□□ -1.47
TDP1-204ENST00000545686 VPREB1P12018 145 aa5.84□□□□□ -1.47
TDP1-204ENST00000545686 EGFEM1PQ0D2K5 195 aa5.84□□□□□ -1.47
TDP1-204ENST00000545686 M0R378 163 aa5.84□□□□□ -1.48
TDP1-204ENST00000545686 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.48
TDP1-204ENST00000545686 TRAV10A0A0B4J240 114 aa5.83□□□□□ -1.48
TDP1-204ENST00000545686 HTN3P15516 51 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
TDP1-204ENST00000545686 LINC00528Q8N1L1 170 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 CAMK2N2Q96S95 79 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 F8WDY8 70 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 H3BNG1 76 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 ERC2-IT1O76042 136 aa5.82□□□□□ -1.48
TDP1-204ENST00000545686 C4orf26Q17RF5 130 aa5.81□□□□□ -1.48
TDP1-204ENST00000545686 KRTAP26-1Q6PEX3 210 aa5.81□□□□□ -1.48
TDP1-204ENST00000545686 HIVEP2P31629 2446 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 VWFP04275 2813 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 NREPQ16612 68 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 TENM4Q6N022 2769 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 F8WEM9 126 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 Q6ZRU5 148 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 RMI2Q96E14 147 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 TM2D3Q9BRN9 247 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
TDP1-204ENST00000545686 BPY2O14599 106 aa5.78□□□□□ -1.48
TDP1-204ENST00000545686 HRCT1Q6UXD1 115 aa5.78□□□□□ -1.48
TDP1-204ENST00000545686 SCXQ7RTU7 201 aa5.78□□□□□ -1.48
TDP1-204ENST00000545686 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.48
TDP1-204ENST00000545686 WFDC10BQ8IUB3 73 aa5.77□□□□□ -1.48
TDP1-204ENST00000545686 ITPR2Q14571 2701 aa5.77□□□□□ -1.49
TDP1-204ENST00000545686 A0A1B0GW54 56 aa5.77□□□□□ -1.49
TDP1-204ENST00000545686 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
TDP1-204ENST00000545686 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
TDP1-204ENST00000545686 KPRPQ5T749 579 aaPredicted RBP5.76□□□□□ -1.49
TDP1-204ENST00000545686 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
TDP1-204ENST00000545686 KCNQ1DNQ9H478 68 aa5.76□□□□□ -1.49
TDP1-204ENST00000545686 SMR3AQ99954 134 aa5.75□□□□□ -1.49
TDP1-204ENST00000545686 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
TDP1-204ENST00000545686 Q6ZRP5 223 aa5.74□□□□□ -1.49
TDP1-204ENST00000545686 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
TDP1-204ENST00000545686 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
TDP1-204ENST00000545686 HIVEP1P15822 2718 aa5.74□□□□□ -1.49
TDP1-204ENST00000545686 LINC01556Q5JQF7 62 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms