RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 TMEM223A0PJW6 202 aa11.71□□□□□ -0.53
CHD4-213ENST00000545584 PRLHP81277 87 aa11.71□□□□□ -0.53
CHD4-213ENST00000545584 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
CHD4-213ENST00000545584 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
CHD4-213ENST00000545584 TMEM238C9JI98 176 aa11.7□□□□□ -0.54
CHD4-213ENST00000545584 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
CHD4-213ENST00000545584 HSBP1O75506 76 aa11.69□□□□□ -0.54
CHD4-213ENST00000545584 SLC7A5P1Q8MH63 180 aa11.69□□□□□ -0.54
CHD4-213ENST00000545584 LPAP08519 4548 aa11.69□□□□□ -0.54
CHD4-213ENST00000545584 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
CHD4-213ENST00000545584 RNF213Q63HN8 5207 aa11.68□□□□□ -0.54
CHD4-213ENST00000545584 IGKV2D-26A0A0A0MRZ7 120 aa11.67□□□□□ -0.54
CHD4-213ENST00000545584 M0R378 163 aa11.67□□□□□ -0.54
CHD4-213ENST00000545584 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
CHD4-213ENST00000545584 Q8NDZ9 215 aa11.66□□□□□ -0.54
CHD4-213ENST00000545584 TRGC2P03986 189 aa11.65□□□□□ -0.54
CHD4-213ENST00000545584 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
CHD4-213ENST00000545584 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.54
CHD4-213ENST00000545584 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
CHD4-213ENST00000545584 HERV-K104P63124 156 aa11.64□□□□□ -0.55
CHD4-213ENST00000545584 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
CHD4-213ENST00000545584 LINC00304Q8N9R0 145 aa11.63□□□□□ -0.55
CHD4-213ENST00000545584 HIGD2AQ9BW72 106 aa11.62□□□□□ -0.55
CHD4-213ENST00000545584 H0Y8G0 127 aa11.61□□□□□ -0.55
CHD4-213ENST00000545584 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
CHD4-213ENST00000545584 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
CHD4-213ENST00000545584 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
CHD4-213ENST00000545584 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
CHD4-213ENST00000545584 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
CHD4-213ENST00000545584 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
CHD4-213ENST00000545584 LEPROTL1O95214 131 aa11.59□□□□□ -0.55
CHD4-213ENST00000545584 PRYO14603 147 aa11.58□□□□□ -0.56
CHD4-213ENST00000545584 LINC00310P59036 64 aa11.58□□□□□ -0.56
CHD4-213ENST00000545584 SERF1AO75920 110 aa11.57□□□□□ -0.56
CHD4-213ENST00000545584 NCR3O14931 201 aa11.56□□□□□ -0.56
CHD4-213ENST00000545584 ZNF706Q9Y5V0 76 aaPredicted RBP11.56□□□□□ -0.56
CHD4-213ENST00000545584 COLCA2A8K830 154 aa11.55□□□□□ -0.56
CHD4-213ENST00000545584 PLNP26678 52 aa11.55□□□□□ -0.56
CHD4-213ENST00000545584 CTAG1AP78358 180 aa11.55□□□□□ -0.56
CHD4-213ENST00000545584 S100A12P80511 92 aa11.55□□□□□ -0.56
CHD4-213ENST00000545584 HSPB8Q9UJY1 196 aa11.55□□□□□ -0.56
CHD4-213ENST00000545584 LEPROTO15243 131 aa11.54□□□□□ -0.56
CHD4-213ENST00000545584 HERVK_113P61574 105 aa11.53□□□□□ -0.56
CHD4-213ENST00000545584 LINC00337Q8N6G1 96 aa11.53□□□□□ -0.56
CHD4-213ENST00000545584 SPRR4Q96PI1 79 aa11.53□□□□□ -0.56
CHD4-213ENST00000545584 RETNLBQ9BQ08 111 aa11.53□□□□□ -0.56
CHD4-213ENST00000545584 KCNQ1DNQ9H478 68 aa11.53□□□□□ -0.56
CHD4-213ENST00000545584 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
CHD4-213ENST00000545584 C3orf22Q8N5N4 141 aa11.52□□□□□ -0.57
CHD4-213ENST00000545584 FABP4P15090 132 aa11.51□□□□□ -0.57
CHD4-213ENST00000545584 TRBV10-3A0A0K0K1G6 114 aa11.5□□□□□ -0.57
CHD4-213ENST00000545584 DPM2O94777 84 aa11.5□□□□□ -0.57
CHD4-213ENST00000545584 SPRR1AP35321 89 aa11.5□□□□□ -0.57
CHD4-213ENST00000545584 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
CHD4-213ENST00000545584 SPAG11AQ6PDA7 123 aa11.5□□□□□ -0.57
CHD4-213ENST00000545584 J3QQQ9 107 aa11.49□□□□□ -0.57
CHD4-213ENST00000545584 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
CHD4-213ENST00000545584 NMUP48645 174 aa11.48□□□□□ -0.57
CHD4-213ENST00000545584 SMCR5Q8TEV8 140 aa11.48□□□□□ -0.57
CHD4-213ENST00000545584 MIEN1Q9BRT3 115 aa11.48□□□□□ -0.57
CHD4-213ENST00000545584 IGKCP01834 107 aa11.47□□□□□ -0.57
CHD4-213ENST00000545584 C4orf48Q5BLP8 95 aa11.47□□□□□ -0.57
CHD4-213ENST00000545584 DAND5Q8N907 189 aa11.47□□□□□ -0.57
CHD4-213ENST00000545584 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
CHD4-213ENST00000545584 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
CHD4-213ENST00000545584 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
CHD4-213ENST00000545584 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
CHD4-213ENST00000545584 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.57
CHD4-213ENST00000545584 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
CHD4-213ENST00000545584 KRTAP4-16G5E9R7 235 aaPredicted RBP11.45□□□□□ -0.58
CHD4-213ENST00000545584 DDTP30046 118 aa11.44□□□□□ -0.58
CHD4-213ENST00000545584 CDIP1Q9H305 208 aa11.44□□□□□ -0.58
CHD4-213ENST00000545584 PPDPFQ9H3Y8 114 aa11.44□□□□□ -0.58
CHD4-213ENST00000545584 TPRXLQ17RH7 258 aa11.43□□□□□ -0.58
CHD4-213ENST00000545584 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
CHD4-213ENST00000545584 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
CHD4-213ENST00000545584 B5MCH6 92 aa11.4□□□□□ -0.58
CHD4-213ENST00000545584 NDUFC2O95298 119 aa11.4□□□□□ -0.58
CHD4-213ENST00000545584 GAGE2AQ6NT46 116 aa11.4□□□□□ -0.58
CHD4-213ENST00000545584 Q8NBF4 154 aa11.4□□□□□ -0.58
CHD4-213ENST00000545584 HIST1H2BKO60814 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BJP06899 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BOP23527 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BBP33778 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BDP58876 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BCP62807 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST2H2BEQ16778 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BHQ93079 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BNQ99877 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 HIST1H2BMQ99879 126 aa11.39□□□□□ -0.59
CHD4-213ENST00000545584 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
CHD4-213ENST00000545584 E9PLD3 99 aa11.37□□□□□ -0.59
CHD4-213ENST00000545584 Q6ZRX8 168 aa11.36□□□□□ -0.59
CHD4-213ENST00000545584 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
CHD4-213ENST00000545584 SPINK1P00995 79 aa11.35□□□□□ -0.59
CHD4-213ENST00000545584 IGLV6-57P01721 117 aa11.35□□□□□ -0.59
CHD4-213ENST00000545584 FP248Q71RG6 208 aaPredicted RBP11.35□□□□□ -0.59
CHD4-213ENST00000545584 TRAV23DV6A0A075B6W5 121 aa11.34□□□□□ -0.59
CHD4-213ENST00000545584 ERC2-IT1O76042 136 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms