RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 Q6ZTC4 211 aa11.89□□□□□ -0.51
SCARB1-208ENST00000544327 WFDC10BQ8IUB3 73 aa11.89□□□□□ -0.51
SCARB1-208ENST00000544327 IGLV6-57P01721 117 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 S100A7L2Q5SY68 101 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 C6orf48Q9UBA6 75 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 TRRAPQ9Y4A5 3859 aa11.88□□□□□ -0.51
SCARB1-208ENST00000544327 C6orf99Q4VX62 202 aa11.86□□□□□ -0.51
SCARB1-208ENST00000544327 TMEM256-PLSCR3K7ERE1 68 aa11.86□□□□□ -0.51
SCARB1-208ENST00000544327 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
SCARB1-208ENST00000544327 JMJD7-PLA2G4BH0Y9G9 81 aa11.84□□□□□ -0.51
SCARB1-208ENST00000544327 ESRGQ1W209 222 aa11.83□□□□□ -0.51
SCARB1-208ENST00000544327 C3orf56Q8N813 242 aa11.83□□□□□ -0.51
SCARB1-208ENST00000544327 LINC01556Q5JQF7 62 aa11.82□□□□□ -0.52
SCARB1-208ENST00000544327 C2orf48Q96LS8 159 aa11.81□□□□□ -0.52
SCARB1-208ENST00000544327 F8WDY8 70 aa11.81□□□□□ -0.52
SCARB1-208ENST00000544327 ZNF561-AS1K7EIQ3 104 aa11.81□□□□□ -0.52
SCARB1-208ENST00000544327 RPL18AQ02543 176 aaKnown RBP11.81□□□□□ -0.52
SCARB1-208ENST00000544327 CCKP06307 115 aa11.8□□□□□ -0.52
SCARB1-208ENST00000544327 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
SCARB1-208ENST00000544327 CMYA5Q8N3K9 4069 aa11.8□□□□□ -0.52
SCARB1-208ENST00000544327 DEFB131BA0A096LNP1 70 aa11.79□□□□□ -0.52
SCARB1-208ENST00000544327 CAMK2N2Q96S95 79 aa11.79□□□□□ -0.52
SCARB1-208ENST00000544327 hADV29S1A0JD25 119 aa11.79□□□□□ -0.52
SCARB1-208ENST00000544327 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
SCARB1-208ENST00000544327 DNAH3Q8TD57 4116 aa11.78□□□□□ -0.52
SCARB1-208ENST00000544327 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.52
SCARB1-208ENST00000544327 Q6JHZ5 121 aa11.77□□□□□ -0.52
SCARB1-208ENST00000544327 LINC00846Q9NV44 126 aa11.77□□□□□ -0.52
SCARB1-208ENST00000544327 H3BQ85 93 aa11.76□□□□□ -0.53
SCARB1-208ENST00000544327 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
SCARB1-208ENST00000544327 TRBV10-3A0A0K0K1G6 114 aa11.76□□□□□ -0.53
SCARB1-208ENST00000544327 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
SCARB1-208ENST00000544327 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
SCARB1-208ENST00000544327 FAM236AA0A1B0GUQ0 79 aa11.75□□□□□ -0.53
SCARB1-208ENST00000544327 FAM236BA0A1B0GV22 79 aa11.75□□□□□ -0.53
SCARB1-208ENST00000544327 VPREB1P12018 145 aa11.75□□□□□ -0.53
SCARB1-208ENST00000544327 Q6ZRU5 148 aa11.75□□□□□ -0.53
SCARB1-208ENST00000544327 TRBV7-6A0A0J9YX20 115 aa11.74□□□□□ -0.53
SCARB1-208ENST00000544327 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
SCARB1-208ENST00000544327 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
SCARB1-208ENST00000544327 DNAH10OSP0CZ25 163 aa11.74□□□□□ -0.53
SCARB1-208ENST00000544327 F8P00451 2351 aa11.73□□□□□ -0.53
SCARB1-208ENST00000544327 CCDC179H3BU77 68 aa11.73□□□□□ -0.53
SCARB1-208ENST00000544327 M0R378 163 aa11.72□□□□□ -0.53
SCARB1-208ENST00000544327 ZNF73O43830 326 aaPredicted RBP11.71□□□□□ -0.54
SCARB1-208ENST00000544327 HIST1H4AP62805 103 aaKnown RBP11.71□□□□□ -0.54
SCARB1-208ENST00000544327 LOC110117498A0A087WWA1 95 aa11.7□□□□□ -0.54
SCARB1-208ENST00000544327 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
SCARB1-208ENST00000544327 TRAV10A0A0B4J240 114 aa11.69□□□□□ -0.54
SCARB1-208ENST00000544327 COX7BP24311 80 aa11.69□□□□□ -0.54
SCARB1-208ENST00000544327 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
SCARB1-208ENST00000544327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.68□□□□□ -0.54
SCARB1-208ENST00000544327 B5MCH6 92 aa11.67□□□□□ -0.54
SCARB1-208ENST00000544327 RBM3P98179 157 aaKnown RBP11.67□□□□□ -0.54
SCARB1-208ENST00000544327 SYCNQ0VAF6 134 aa11.67□□□□□ -0.54
SCARB1-208ENST00000544327 Q6ZQY7 126 aa11.67□□□□□ -0.54
SCARB1-208ENST00000544327 ATP5EP2Q5VTU8 51 aa11.66□□□□□ -0.54
SCARB1-208ENST00000544327 Q6ZQT0 140 aa11.66□□□□□ -0.54
SCARB1-208ENST00000544327 TM2D3Q9BRN9 247 aa11.66□□□□□ -0.54
SCARB1-208ENST00000544327 GHRHP01286 108 aa11.65□□□□□ -0.54
SCARB1-208ENST00000544327 IGKV3D-7A0A0C4DH55 119 aa11.65□□□□□ -0.55
SCARB1-208ENST00000544327 Q6ZRP5 223 aa11.65□□□□□ -0.55
SCARB1-208ENST00000544327 PDE6GP18545 87 aa11.63□□□□□ -0.55
SCARB1-208ENST00000544327 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
SCARB1-208ENST00000544327 ANK2Q01484 3957 aa11.63□□□□□ -0.55
SCARB1-208ENST00000544327 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
SCARB1-208ENST00000544327 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
SCARB1-208ENST00000544327 ATOX1O00244 68 aa11.62□□□□□ -0.55
SCARB1-208ENST00000544327 FBN1P35555 2871 aaKnown RBP11.61□□□□□ -0.55
SCARB1-208ENST00000544327 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
SCARB1-208ENST00000544327 PLA2G2DQ9UNK4 145 aa11.6□□□□□ -0.55
SCARB1-208ENST00000544327 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
SCARB1-208ENST00000544327 DSCR8Q96T75 97 aa11.59□□□□□ -0.55
SCARB1-208ENST00000544327 UBL5Q9BZL1 73 aa11.59□□□□□ -0.55
SCARB1-208ENST00000544327 TENM3Q9P273 2699 aa11.58□□□□□ -0.55
SCARB1-208ENST00000544327 K7EIL1 84 aa11.58□□□□□ -0.56
SCARB1-208ENST00000544327 UQCRQO14949 82 aa11.58□□□□□ -0.56
SCARB1-208ENST00000544327 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
SCARB1-208ENST00000544327 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
SCARB1-208ENST00000544327 RMI2Q96E14 147 aa11.56□□□□□ -0.56
SCARB1-208ENST00000544327 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
SCARB1-208ENST00000544327 SS18L2Q9UHA2 77 aa11.56□□□□□ -0.56
SCARB1-208ENST00000544327 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
SCARB1-208ENST00000544327 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
SCARB1-208ENST00000544327 COX7CP15954 63 aa11.55□□□□□ -0.56
SCARB1-208ENST00000544327 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
SCARB1-208ENST00000544327 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-208ENST00000544327 SERTAD4-AS1Q5TG53 156 aa11.53□□□□□ -0.56
SCARB1-208ENST00000544327 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
SCARB1-208ENST00000544327 FLNBO75369 2602 aaKnown RBP11.53□□□□□ -0.56
SCARB1-208ENST00000544327 A0A087WVE0 104 aa11.53□□□□□ -0.56
SCARB1-208ENST00000544327 C7orf33Q8WU49 177 aa11.53□□□□□ -0.56
SCARB1-208ENST00000544327 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.57
SCARB1-208ENST00000544327 STAB1Q9NY15 2570 aa11.52□□□□□ -0.57
SCARB1-208ENST00000544327 PKD1L1Q8TDX9 2849 aa11.52□□□□□ -0.57
SCARB1-208ENST00000544327 M0R2N4 97 aa11.51□□□□□ -0.57
SCARB1-208ENST00000544327 MAST4O15021 2626 aa11.51□□□□□ -0.57
SCARB1-208ENST00000544327 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms