RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 FAM218AQ96MZ4 157 aa11.44□□□□□ -0.58
PTPRO-209ENST00000543886 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
PTPRO-209ENST00000543886 ZNF561-AS1K7EIQ3 104 aa11.43□□□□□ -0.58
PTPRO-209ENST00000543886 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
PTPRO-209ENST00000543886 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
PTPRO-209ENST00000543886 H0YGX0 51 aa11.42□□□□□ -0.58
PTPRO-209ENST00000543886 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
PTPRO-209ENST00000543886 B5MCH6 92 aa11.41□□□□□ -0.58
PTPRO-209ENST00000543886 ACYP1P07311 99 aa11.41□□□□□ -0.58
PTPRO-209ENST00000543886 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
PTPRO-209ENST00000543886 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
PTPRO-209ENST00000543886 C6orf48Q9UBA6 75 aa11.4□□□□□ -0.58
PTPRO-209ENST00000543886 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.58
PTPRO-209ENST00000543886 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
PTPRO-209ENST00000543886 MDFIQ99750 246 aa11.4□□□□□ -0.58
PTPRO-209ENST00000543886 SS18L2Q9UHA2 77 aa11.4□□□□□ -0.58
PTPRO-209ENST00000543886 NCR3O14931 201 aa11.39□□□□□ -0.59
PTPRO-209ENST00000543886 TMEM126AQ9H061 195 aa11.39□□□□□ -0.59
PTPRO-209ENST00000543886 TRBV7-7A0A0K0K1E9 115 aa11.38□□□□□ -0.59
PTPRO-209ENST00000543886 DNAL4O96015 105 aa11.38□□□□□ -0.59
PTPRO-209ENST00000543886 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
PTPRO-209ENST00000543886 LINC00588Q9Y4M8 146 aa11.38□□□□□ -0.59
PTPRO-209ENST00000543886 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
PTPRO-209ENST00000543886 A0A087WYN8 130 aa11.37□□□□□ -0.59
PTPRO-209ENST00000543886 Q9HAA7 133 aa11.37□□□□□ -0.59
PTPRO-209ENST00000543886 CCDC179H3BU77 68 aa11.36□□□□□ -0.59
PTPRO-209ENST00000543886 S100A7L2Q5SY68 101 aa11.36□□□□□ -0.59
PTPRO-209ENST00000543886 Q8NDZ9 215 aa11.36□□□□□ -0.59
PTPRO-209ENST00000543886 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
PTPRO-209ENST00000543886 IMUPQ9GZP8 106 aa11.34□□□□□ -0.59
PTPRO-209ENST00000543886 LECT2O14960 151 aa11.33□□□□□ -0.6
PTPRO-209ENST00000543886 Q6ZRU5 148 aa11.33□□□□□ -0.6
PTPRO-209ENST00000543886 F8WDY8 70 aa11.32□□□□□ -0.6
PTPRO-209ENST00000543886 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
PTPRO-209ENST00000543886 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
PTPRO-209ENST00000543886 LINC00643Q86TS7 51 aa11.29□□□□□ -0.6
PTPRO-209ENST00000543886 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
PTPRO-209ENST00000543886 UPK3BQ9BT76 320 aa11.29□□□□□ -0.6
PTPRO-209ENST00000543886 NDUFC2-KCTD14E9PQ53 114 aa11.28□□□□□ -0.6
PTPRO-209ENST00000543886 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
PTPRO-209ENST00000543886 RMI2Q96E14 147 aa11.28□□□□□ -0.6
PTPRO-209ENST00000543886 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
PTPRO-209ENST00000543886 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
PTPRO-209ENST00000543886 A0A1B0GX51 115 aa11.27□□□□□ -0.61
PTPRO-209ENST00000543886 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
PTPRO-209ENST00000543886 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
PTPRO-209ENST00000543886 B9D2Q9BPU9 175 aa11.26□□□□□ -0.61
PTPRO-209ENST00000543886 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
PTPRO-209ENST00000543886 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
PTPRO-209ENST00000543886 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
PTPRO-209ENST00000543886 SLPIP03973 132 aa11.24□□□□□ -0.61
PTPRO-209ENST00000543886 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
PTPRO-209ENST00000543886 Q8N814 137 aa11.24□□□□□ -0.61
PTPRO-209ENST00000543886 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
PTPRO-209ENST00000543886 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
PTPRO-209ENST00000543886 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
PTPRO-209ENST00000543886 LINC00167Q96N53 147 aa11.23□□□□□ -0.61
PTPRO-209ENST00000543886 VPREB1P12018 145 aa11.22□□□□□ -0.61
PTPRO-209ENST00000543886 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.61
PTPRO-209ENST00000543886 Q6ZRP5 223 aa11.21□□□□□ -0.61
PTPRO-209ENST00000543886 CASC10Q5T4H9 136 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 LINC00575Q6W349 94 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 M0R378 163 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
PTPRO-209ENST00000543886 GAGE2AQ6NT46 116 aa11.19□□□□□ -0.62
PTPRO-209ENST00000543886 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
PTPRO-209ENST00000543886 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
PTPRO-209ENST00000543886 ZNF73O43830 326 aaPredicted RBP11.16□□□□□ -0.62
PTPRO-209ENST00000543886 TMEM256-PLSCR3K7ERE1 68 aa11.16□□□□□ -0.62
PTPRO-209ENST00000543886 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
PTPRO-209ENST00000543886 OBSCN-AS1Q96MR7 158 aa11.16□□□□□ -0.62
PTPRO-209ENST00000543886 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
PTPRO-209ENST00000543886 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
PTPRO-209ENST00000543886 SMIM20Q8N5G0 67 aa11.15□□□□□ -0.62
PTPRO-209ENST00000543886 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.62
PTPRO-209ENST00000543886 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.63
PTPRO-209ENST00000543886 UQCRQO14949 82 aa11.14□□□□□ -0.63
PTPRO-209ENST00000543886 COX7BP24311 80 aa11.13□□□□□ -0.63
PTPRO-209ENST00000543886 C9orf153Q5TBE3 101 aa11.13□□□□□ -0.63
PTPRO-209ENST00000543886 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
PTPRO-209ENST00000543886 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
PTPRO-209ENST00000543886 TRBV7-6A0A0J9YX20 115 aa11.12□□□□□ -0.63
PTPRO-209ENST00000543886 JMJD7-PLA2G4BH0Y9G9 81 aa11.11□□□□□ -0.63
PTPRO-209ENST00000543886 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
PTPRO-209ENST00000543886 ELOF1P60002 83 aaKnown RBP11.1□□□□□ -0.63
PTPRO-209ENST00000543886 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
PTPRO-209ENST00000543886 ATOX1O00244 68 aa11.09□□□□□ -0.63
PTPRO-209ENST00000543886 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
PTPRO-209ENST00000543886 PSCAO43653 123 aa11.08□□□□□ -0.63
PTPRO-209ENST00000543886 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.63
PTPRO-209ENST00000543886 HIST1H4AP62805 103 aaKnown RBP11.08□□□□□ -0.64
PTPRO-209ENST00000543886 Q6ZQY7 126 aa11.08□□□□□ -0.64
PTPRO-209ENST00000543886 COX7CP15954 63 aa11.07□□□□□ -0.64
PTPRO-209ENST00000543886 Q6JHZ5 121 aa11.07□□□□□ -0.64
PTPRO-209ENST00000543886 H3BQ85 93 aa11.07□□□□□ -0.64
PTPRO-209ENST00000543886 DNHD1Q96M86 4753 aa11.06□□□□□ -0.64
PTPRO-209ENST00000543886 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
PTPRO-209ENST00000543886 C7orf33Q8WU49 177 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms