RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 IGHV3OR16-12A0A075B7B8 117 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 APELAP0DMC3 54 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 CCL3L1P16619 93 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 Q6ZQT0 140 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 IGFL4Q6B9Z1 124 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 HIVEP3Q5T1R4 2406 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 C9orf47Q6ZRZ4 202 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
VPS13D-212ENST00000543766 A8MWP4 228 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 OBSCN-AS1Q96MR7 158 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 FAM215AQ9Y5M1 114 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 FAM104AQ969W3 186 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 IGLV11-55A0A075B6I3 123 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 SPINK7P58062 85 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 PRR9Q5T870 116 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 TEX15Q9BXT5 2789 aa6.03□□□□□ -1.44
VPS13D-212ENST00000543766 ERC2-IT1O76042 136 aa6.02□□□□□ -1.45
VPS13D-212ENST00000543766 CELSR2Q9HCU4 2923 aa6.02□□□□□ -1.45
VPS13D-212ENST00000543766 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
VPS13D-212ENST00000543766 DHRS4-AS1Q9P1J3 65 aa6.02□□□□□ -1.45
VPS13D-212ENST00000543766 IGLV5-45A0A087WSX0 123 aa6.01□□□□□ -1.45
VPS13D-212ENST00000543766 H0YGX0 51 aa6.01□□□□□ -1.45
VPS13D-212ENST00000543766 ITPR2Q14571 2701 aa6.01□□□□□ -1.45
VPS13D-212ENST00000543766 IGLV1-47P01700 117 aa6.01□□□□□ -1.45
VPS13D-212ENST00000543766 RNF5Q99942 180 aa6.01□□□□□ -1.45
VPS13D-212ENST00000543766 NDUFA4O00483 81 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 KLK9Q2XQG4 91 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 KLK9Q9UKQ9 250 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 Q6ZR54 194 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 LENEPQ9Y5L5 61 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 IGHV3-73A0A0B4J1V6 119 aa6□□□□□ -1.45
VPS13D-212ENST00000543766 CTSGP08311 255 aa5.99□□□□□ -1.45
VPS13D-212ENST00000543766 UBR5O95071 2799 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-212ENST00000543766 ZFAND2AQ8N6M9 145 aa5.98□□□□□ -1.45
VPS13D-212ENST00000543766 DEFB108BQ8NET1 73 aa5.98□□□□□ -1.45
VPS13D-212ENST00000543766 LINC01006Q8NI28 216 aa5.98□□□□□ -1.45
VPS13D-212ENST00000543766 TLN2Q9Y4G6 2542 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 IGHV4-30-2A0A087WSY4 118 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 IGLV4-3A0A075B6K6 122 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 NDUFB1O75438 58 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 DEFB113Q30KQ7 82 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 LCE2DQ5TA82 110 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-212ENST00000543766 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
VPS13D-212ENST00000543766 SETD2Q9BYW2 2564 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-212ENST00000543766 CR1P17927 2039 aa5.96□□□□□ -1.45
VPS13D-212ENST00000543766 IGKV2-29A2NJV5 120 aaPredicted RBP5.96□□□□□ -1.45
VPS13D-212ENST00000543766 NPBQ8NG41 125 aa5.96□□□□□ -1.45
VPS13D-212ENST00000543766 SMIM11BQ8TCY0 68 aa5.96□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV3-38A0A0C4DH36 116 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 ITPR3Q14573 2671 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 JMJD1CQ15652 2540 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 ACANP16112 2415 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 CSPG4Q6UVK1 2322 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 NBPF19A0A087WUL8 3843 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 KAAG1Q9UBP8 84 aa5.95□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV3-49A0A0A0MS15 119 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 AKAP9Q99996 3911 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 LYPD2Q6UXB3 125 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 LINC01560Q8TB33 94 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-212ENST00000543766 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 LINC00158P58513 81 aa5.94□□□□□ -1.46
VPS13D-212ENST00000543766 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-212ENST00000543766 J3QKU1 62 aa5.93□□□□□ -1.46
VPS13D-212ENST00000543766 SMIM29Q86T20 159 aa5.93□□□□□ -1.46
VPS13D-212ENST00000543766 ABCA2Q9BZC7 2435 aa5.93□□□□□ -1.46
VPS13D-212ENST00000543766 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 NDUFA1O15239 70 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 TOMM7Q9P0U1 55 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 DOPEY1Q5JWR5 2465 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV4-28A0A0C4DH34 117 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV4-61A0A0C4DH41 118 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV4-59P01825 116 aa5.92□□□□□ -1.46
VPS13D-212ENST00000543766 M0QY20 66 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 PLA2G2AP14555 144 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 IGHV3OR16-8A0A075B7F1 116 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 CYSRT1A8MQ03 144 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
VPS13D-212ENST00000543766 M0R2N4 97 aa5.9□□□□□ -1.46
VPS13D-212ENST00000543766 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
VPS13D-212ENST00000543766 A0A0J9YWU9 116 aa5.9□□□□□ -1.47
VPS13D-212ENST00000543766 IGHV3-23P01764 117 aa5.89□□□□□ -1.47
VPS13D-212ENST00000543766 IGHV3-53P01767 116 aa5.89□□□□□ -1.47
VPS13D-212ENST00000543766 IGHV3-35A0A0C4DH35 117 aa5.89□□□□□ -1.47
VPS13D-212ENST00000543766 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
VPS13D-212ENST00000543766 TRGV4A0A0C4DH28 118 aa5.88□□□□□ -1.47
VPS13D-212ENST00000543766 IGLV5-39A0A0G2JS06 123 aa5.88□□□□□ -1.47
VPS13D-212ENST00000543766 COA5Q86WW8 74 aa5.88□□□□□ -1.47
VPS13D-212ENST00000543766 SONP18583 2426 aaKnown RBP5.88□□□□□ -1.47
VPS13D-212ENST00000543766 C2CD3Q4AC94 2353 aa5.88□□□□□ -1.47
VPS13D-212ENST00000543766 CAMK2N2Q96S95 79 aa5.87□□□□□ -1.47
VPS13D-212ENST00000543766 TRGV2A0A075B6R0 118 aa5.87□□□□□ -1.47
VPS13D-212ENST00000543766 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms