RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 RPL24P83731 157 aaKnown RBP7.6□□□□□ -1.19
DDB1-223ENST00000543658 ADAMTSL4-AS1Q5T5F5 129 aa7.6□□□□□ -1.19
DDB1-223ENST00000543658 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
DDB1-223ENST00000543658 LITAFQ99732 161 aa7.6□□□□□ -1.19
DDB1-223ENST00000543658 HECTD4Q9Y4D8 3996 aa7.6□□□□□ -1.19
DDB1-223ENST00000543658 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
DDB1-223ENST00000543658 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
DDB1-223ENST00000543658 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
DDB1-223ENST00000543658 FAM19A5Q7Z5A7 132 aaPredicted RBP7.59□□□□□ -1.19
DDB1-223ENST00000543658 NKAPP1Q8N9T2 125 aa7.59□□□□□ -1.19
DDB1-223ENST00000543658 LINC00308Q8TCZ7 52 aa7.59□□□□□ -1.19
DDB1-223ENST00000543658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
DDB1-223ENST00000543658 EPPK1P58107 5090 aaKnown RBP7.59□□□□□ -1.19
DDB1-223ENST00000543658 CTAG1AP78358 180 aa7.58□□□□□ -1.2
DDB1-223ENST00000543658 PKD1P98161 4303 aa7.58□□□□□ -1.2
DDB1-223ENST00000543658 TAL2Q16559 108 aa7.57□□□□□ -1.2
DDB1-223ENST00000543658 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
DDB1-223ENST00000543658 BIRC6Q9NR09 4857 aa7.57□□□□□ -1.2
DDB1-223ENST00000543658 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
DDB1-223ENST00000543658 A0A087WYN8 130 aa7.56□□□□□ -1.2
DDB1-223ENST00000543658 HSD52Q0P140 79 aa7.56□□□□□ -1.2
DDB1-223ENST00000543658 Q6ZSA8 131 aa7.56□□□□□ -1.2
DDB1-223ENST00000543658 MUSTN1Q8IVN3 82 aa7.56□□□□□ -1.2
DDB1-223ENST00000543658 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
DDB1-223ENST00000543658 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
DDB1-223ENST00000543658 PANO1I0J062 215 aa7.55□□□□□ -1.2
DDB1-223ENST00000543658 M0QXV9 152 aa7.55□□□□□ -1.2
DDB1-223ENST00000543658 LCE2BO14633 110 aa7.55□□□□□ -1.2
DDB1-223ENST00000543658 LOC107984156A0A0G2JMH3 177 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 TMEM238LA0A1B0GVL6 79 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 NCR3O14931 201 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 NDUFC2O95298 119 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 ARL17AQ8IVW1 177 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 DNAH5Q8TE73 4624 aa7.54□□□□□ -1.2
DDB1-223ENST00000543658 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
DDB1-223ENST00000543658 VPREB1P12018 145 aa7.53□□□□□ -1.2
DDB1-223ENST00000543658 UBE2BP63146 152 aa7.53□□□□□ -1.2
DDB1-223ENST00000543658 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
DDB1-223ENST00000543658 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
DDB1-223ENST00000543658 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
DDB1-223ENST00000543658 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 M0R378 163 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.21
DDB1-223ENST00000543658 CEND1Q8N111 149 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 CIRBP-AS1Q8TBR5 109 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 C22orf24Q9Y442 160 aa7.52□□□□□ -1.21
DDB1-223ENST00000543658 HAMPP81172 84 aa7.51□□□□□ -1.21
DDB1-223ENST00000543658 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
DDB1-223ENST00000543658 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 A4D1N5 150 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 GAGE10A6NGK3 116 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 M0R143 59 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
DDB1-223ENST00000543658 DDTP30046 118 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 PHF5AQ7RTV0 110 aaKnown RBP7.5□□□□□ -1.21
DDB1-223ENST00000543658 OR13C6PQ8NH95 151 aa7.5□□□□□ -1.21
DDB1-223ENST00000543658 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
DDB1-223ENST00000543658 RAB37Q96AX2 223 aa7.49□□□□□ -1.21
DDB1-223ENST00000543658 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
DDB1-223ENST00000543658 CDK2AP2O75956 126 aa7.48□□□□□ -1.21
DDB1-223ENST00000543658 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
DDB1-223ENST00000543658 Q8NDZ9 215 aa7.48□□□□□ -1.21
DDB1-223ENST00000543658 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
DDB1-223ENST00000543658 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
DDB1-223ENST00000543658 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
DDB1-223ENST00000543658 A6NDN8 102 aa7.47□□□□□ -1.21
DDB1-223ENST00000543658 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
DDB1-223ENST00000543658 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
DDB1-223ENST00000543658 RPL37AP8A6NKH3 93 aa7.46□□□□□ -1.22
DDB1-223ENST00000543658 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
DDB1-223ENST00000543658 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.22
DDB1-223ENST00000543658 FXYD2P54710 66 aa7.46□□□□□ -1.22
DDB1-223ENST00000543658 XGP55808 180 aa7.46□□□□□ -1.22
DDB1-223ENST00000543658 TMEM126AQ9H061 195 aa7.46□□□□□ -1.22
DDB1-223ENST00000543658 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
DDB1-223ENST00000543658 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
DDB1-223ENST00000543658 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
DDB1-223ENST00000543658 IGLV1-50A0A075B6I6 118 aa7.44□□□□□ -1.22
DDB1-223ENST00000543658 PRYO14603 147 aa7.44□□□□□ -1.22
DDB1-223ENST00000543658 RPL13AP40429 203 aaKnown RBP7.44□□□□□ -1.22
DDB1-223ENST00000543658 BATFQ16520 125 aa7.44□□□□□ -1.22
DDB1-223ENST00000543658 BVES-AS1Q5T3Y7 98 aa7.44□□□□□ -1.22
DDB1-223ENST00000543658 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
DDB1-223ENST00000543658 DYNC1H1Q14204 4646 aaKnown RBP7.43□□□□□ -1.22
DDB1-223ENST00000543658 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
DDB1-223ENST00000543658 TRAV23DV6A0A075B6W5 121 aa7.43□□□□□ -1.22
DDB1-223ENST00000543658 CFC1BP0CG36 223 aa7.43□□□□□ -1.22
DDB1-223ENST00000543658 CFC1P0CG37 223 aa7.43□□□□□ -1.22
DDB1-223ENST00000543658 Q1RN00 199 aa7.43□□□□□ -1.22
DDB1-223ENST00000543658 LRP1BQ9NZR2 4599 aa7.42□□□□□ -1.22
DDB1-223ENST00000543658 IGLV6-57P01721 117 aa7.42□□□□□ -1.22
DDB1-223ENST00000543658 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
DDB1-223ENST00000543658 REG3GQ6UW15 175 aa7.42□□□□□ -1.22
DDB1-223ENST00000543658 H7C2G1 150 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms