RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 LBHQ53QV2 105 aaPredicted RBP7.67□□□□□ -1.18
DDX55-210ENST00000543016 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
DDX55-210ENST00000543016 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
DDX55-210ENST00000543016 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 Q6ZVH6 145 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 Q8N1X5 172 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 COPS9Q8WXC6 57 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
DDX55-210ENST00000543016 A0A0U1RRA0 63 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 TMEM238C9JI98 176 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 HAMPP81172 84 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 PYY3Q5JQD4 70 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 FAM19A5Q7Z5A7 132 aaPredicted RBP7.65□□□□□ -1.18
DDX55-210ENST00000543016 PCP2Q8IVA1 136 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 MIEN1Q9BRT3 115 aa7.65□□□□□ -1.18
DDX55-210ENST00000543016 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 M0QXV9 152 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 DLEU1O43261 78 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 NKAPP1Q8N9T2 125 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 TTTY13Q9BZ97 58 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 PPDPFQ9H3Y8 114 aa7.64□□□□□ -1.19
DDX55-210ENST00000543016 APOBP04114 4563 aaKnown RBP7.63□□□□□ -1.19
DDX55-210ENST00000543016 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
DDX55-210ENST00000543016 COX8AP10176 69 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 LITAFQ99732 161 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
DDX55-210ENST00000543016 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
DDX55-210ENST00000543016 VPREB1P12018 145 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 IFITM1P13164 125 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 ADAMTSL4-AS1Q5T5F5 129 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
DDX55-210ENST00000543016 KRTAP7-1Q8IUC3 87 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 RYR1P21817 5038 aa7.62□□□□□ -1.19
DDX55-210ENST00000543016 NDUFC2O95298 119 aa7.61□□□□□ -1.19
DDX55-210ENST00000543016 S100A12P80511 92 aa7.61□□□□□ -1.19
DDX55-210ENST00000543016 PHF5AQ7RTV0 110 aaKnown RBP7.61□□□□□ -1.19
DDX55-210ENST00000543016 KIAA1109Q2LD37 5005 aa7.61□□□□□ -1.19
DDX55-210ENST00000543016 DAND5Q8N907 189 aa7.6□□□□□ -1.19
DDX55-210ENST00000543016 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
DDX55-210ENST00000543016 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
DDX55-210ENST00000543016 M0R378 163 aa7.59□□□□□ -1.19
DDX55-210ENST00000543016 RPL37AP61513 92 aaKnown RBP7.59□□□□□ -1.19
DDX55-210ENST00000543016 UBE2BP63146 152 aa7.59□□□□□ -1.19
DDX55-210ENST00000543016 Q5VSD8 79 aa7.59□□□□□ -1.19
DDX55-210ENST00000543016 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
DDX55-210ENST00000543016 SPANXB1Q9NS25 103 aaPredicted RBP7.59□□□□□ -1.19
DDX55-210ENST00000543016 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
DDX55-210ENST00000543016 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
DDX55-210ENST00000543016 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDX55-210ENST00000543016 LINC00518Q8N0U6 118 aa7.57□□□□□ -1.2
DDX55-210ENST00000543016 C14orf144Q96I85 54 aa7.57□□□□□ -1.2
DDX55-210ENST00000543016 HIGD1BQ9P298 99 aa7.57□□□□□ -1.2
DDX55-210ENST00000543016 HSPG2P98160 4391 aa7.57□□□□□ -1.2
DDX55-210ENST00000543016 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
DDX55-210ENST00000543016 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
DDX55-210ENST00000543016 CBY1Q9Y3M2 126 aa7.56□□□□□ -1.2
DDX55-210ENST00000543016 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
DDX55-210ENST00000543016 LOC105371267A0A1B0GV96 52 aa7.55□□□□□ -1.2
DDX55-210ENST00000543016 Q8NDZ9 215 aa7.55□□□□□ -1.2
DDX55-210ENST00000543016 PSORS1C2Q9UIG4 136 aa7.55□□□□□ -1.2
DDX55-210ENST00000543016 GAGE10A6NGK3 116 aa7.54□□□□□ -1.2
DDX55-210ENST00000543016 NPC2P61916 151 aa7.54□□□□□ -1.2
DDX55-210ENST00000543016 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
DDX55-210ENST00000543016 UQCR10Q9UDW1 63 aa7.53□□□□□ -1.2
DDX55-210ENST00000543016 HERC2O95714 4834 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 RPL37AP8A6NKH3 93 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 NCR3O14931 201 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
DDX55-210ENST00000543016 KRTAP10-4P60372 401 aaPredicted RBP7.52□□□□□ -1.21
DDX55-210ENST00000543016 TAL2Q16559 108 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
DDX55-210ENST00000543016 PRYO14603 147 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 BCE1O60756 84 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 IGLV6-57P01721 117 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
DDX55-210ENST00000543016 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 TRBV10-3A0A0K0K1G6 114 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 GHRHP01286 108 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 IGLV7-43P04211 117 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 DDTP30046 118 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 KRTAP17-1Q9BYP8 105 aa7.5□□□□□ -1.21
DDX55-210ENST00000543016 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
DDX55-210ENST00000543016 C2orf91Q6ZV80 131 aa7.49□□□□□ -1.21
DDX55-210ENST00000543016 FAT1Q14517 4588 aa7.48□□□□□ -1.21
DDX55-210ENST00000543016 TRAV13-2A0A0B4J235 113 aa7.48□□□□□ -1.21
DDX55-210ENST00000543016 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
DDX55-210ENST00000543016 ZNF861PO60384 105 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms