RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
SCNN1A-219ENST00000542966 E9PLD3 99 aa10.18□□□□□ -0.78
SCNN1A-219ENST00000542966 IGKV2D-26A0A0A0MRZ7 120 aa10.17□□□□□ -0.78
SCNN1A-219ENST00000542966 NDUFC2-KCTD14E9PQ53 114 aa10.17□□□□□ -0.78
SCNN1A-219ENST00000542966 C1orf137Q5JT78 98 aa10.17□□□□□ -0.78
SCNN1A-219ENST00000542966 PLEKHB2Q96CS7 222 aa10.17□□□□□ -0.78
SCNN1A-219ENST00000542966 LINC01600Q96MT4 127 aa10.17□□□□□ -0.78
SCNN1A-219ENST00000542966 TNXBP22105 4242 aa10.16□□□□□ -0.78
SCNN1A-219ENST00000542966 REG3GQ6UW15 175 aa10.16□□□□□ -0.78
SCNN1A-219ENST00000542966 J3QQQ9 107 aa10.15□□□□□ -0.78
SCNN1A-219ENST00000542966 CXCL5P42830 114 aa10.15□□□□□ -0.78
SCNN1A-219ENST00000542966 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
SCNN1A-219ENST00000542966 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
SCNN1A-219ENST00000542966 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
SCNN1A-219ENST00000542966 M0QXV9 152 aa10.14□□□□□ -0.79
SCNN1A-219ENST00000542966 KRTAP11-1Q8IUC1 163 aa10.14□□□□□ -0.79
SCNN1A-219ENST00000542966 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
SCNN1A-219ENST00000542966 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
SCNN1A-219ENST00000542966 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
SCNN1A-219ENST00000542966 NDUFA12Q9UI09 145 aa10.13□□□□□ -0.79
SCNN1A-219ENST00000542966 NMUP48645 174 aa10.11□□□□□ -0.79
SCNN1A-219ENST00000542966 UBE2BP63146 152 aa10.11□□□□□ -0.79
SCNN1A-219ENST00000542966 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
SCNN1A-219ENST00000542966 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
SCNN1A-219ENST00000542966 VAMP8Q9BV40 100 aa10.1□□□□□ -0.79
SCNN1A-219ENST00000542966 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
SCNN1A-219ENST00000542966 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
SCNN1A-219ENST00000542966 SFTA2Q6UW10 78 aa10.09□□□□□ -0.79
SCNN1A-219ENST00000542966 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
SCNN1A-219ENST00000542966 SPATA45Q537H7 98 aa10.08□□□□□ -0.8
SCNN1A-219ENST00000542966 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
SCNN1A-219ENST00000542966 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
SCNN1A-219ENST00000542966 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
SCNN1A-219ENST00000542966 HERV-K104P63124 156 aa10.07□□□□□ -0.8
SCNN1A-219ENST00000542966 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
SCNN1A-219ENST00000542966 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
SCNN1A-219ENST00000542966 A0A0J9YXY3 114 aa10.05□□□□□ -0.8
SCNN1A-219ENST00000542966 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
SCNN1A-219ENST00000542966 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
SCNN1A-219ENST00000542966 COX8AP10176 69 aa10.03□□□□□ -0.8
SCNN1A-219ENST00000542966 PFN2P35080 140 aa10.03□□□□□ -0.8
SCNN1A-219ENST00000542966 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
SCNN1A-219ENST00000542966 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
SCNN1A-219ENST00000542966 H0Y9J4 135 aa10.02□□□□□ -0.81
SCNN1A-219ENST00000542966 SMIM13P0DJ93 91 aa10.02□□□□□ -0.81
SCNN1A-219ENST00000542966 C14orf144Q96I85 54 aa10.02□□□□□ -0.81
SCNN1A-219ENST00000542966 S100A12P80511 92 aa10.01□□□□□ -0.81
SCNN1A-219ENST00000542966 LBHQ53QV2 105 aaPredicted RBP10.01□□□□□ -0.81
SCNN1A-219ENST00000542966 BOD1L2Q8IYS8 172 aa10.01□□□□□ -0.81
SCNN1A-219ENST00000542966 LITAFQ99732 161 aa10.01□□□□□ -0.81
SCNN1A-219ENST00000542966 LINC00158P58513 81 aa10□□□□□ -0.81
SCNN1A-219ENST00000542966 COX17Q14061 63 aa10□□□□□ -0.81
SCNN1A-219ENST00000542966 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
SCNN1A-219ENST00000542966 DLEU1O43261 78 aa9.99□□□□□ -0.81
SCNN1A-219ENST00000542966 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
SCNN1A-219ENST00000542966 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
SCNN1A-219ENST00000542966 LINC00587B1AMM8 73 aa9.98□□□□□ -0.81
SCNN1A-219ENST00000542966 TIMM17BO60830 172 aa9.98□□□□□ -0.81
SCNN1A-219ENST00000542966 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
SCNN1A-219ENST00000542966 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
SCNN1A-219ENST00000542966 SLC25A34Q6PIV7 304 aa9.97□□□□□ -0.81
SCNN1A-219ENST00000542966 DAND5Q8N907 189 aa9.97□□□□□ -0.81
SCNN1A-219ENST00000542966 C12orf57Q99622 126 aa9.97□□□□□ -0.81
SCNN1A-219ENST00000542966 GAGE10A6NGK3 116 aa9.96□□□□□ -0.82
SCNN1A-219ENST00000542966 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
SCNN1A-219ENST00000542966 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
SCNN1A-219ENST00000542966 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
SCNN1A-219ENST00000542966 ZNF861PO60384 105 aa9.95□□□□□ -0.82
SCNN1A-219ENST00000542966 LINC00518Q8N0U6 118 aa9.95□□□□□ -0.82
SCNN1A-219ENST00000542966 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
SCNN1A-219ENST00000542966 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
SCNN1A-219ENST00000542966 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
SCNN1A-219ENST00000542966 RNF213Q63HN8 5207 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 SOSTDC1Q6X4U4 206 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
SCNN1A-219ENST00000542966 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
SCNN1A-219ENST00000542966 Q8NDZ9 215 aa9.92□□□□□ -0.82
SCNN1A-219ENST00000542966 BCE1O60756 84 aa9.91□□□□□ -0.82
SCNN1A-219ENST00000542966 NPC2P61916 151 aa9.91□□□□□ -0.82
SCNN1A-219ENST00000542966 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
SCNN1A-219ENST00000542966 UQCR10Q9UDW1 63 aa9.91□□□□□ -0.82
SCNN1A-219ENST00000542966 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
SCNN1A-219ENST00000542966 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
SCNN1A-219ENST00000542966 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
SCNN1A-219ENST00000542966 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
SCNN1A-219ENST00000542966 HIGD1BQ9P298 99 aa9.9□□□□□ -0.82
SCNN1A-219ENST00000542966 LRP2P98164 4655 aa9.9□□□□□ -0.83
SCNN1A-219ENST00000542966 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
SCNN1A-219ENST00000542966 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
SCNN1A-219ENST00000542966 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
SCNN1A-219ENST00000542966 VPREB1P12018 145 aa9.88□□□□□ -0.83
SCNN1A-219ENST00000542966 Q6ZVH6 145 aa9.88□□□□□ -0.83
SCNN1A-219ENST00000542966 MIEN1Q9BRT3 115 aa9.87□□□□□ -0.83
SCNN1A-219ENST00000542966 IFITM1P13164 125 aa9.86□□□□□ -0.83
SCNN1A-219ENST00000542966 RPL24P83731 157 aaKnown RBP9.86□□□□□ -0.83
SCNN1A-219ENST00000542966 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms