RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 PRR3P79522 188 aaKnown RBP3.54□□□□□ -1.84
SUDS3-202ENST00000541280 PMVKQ15126 192 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 C9orf116Q5BN46 136 aaPredicted RBP3.54□□□□□ -1.84
SUDS3-202ENST00000541280 PDZD11Q5EBL8 140 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 CST9LQ9H4G1 147 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
SUDS3-202ENST00000541280 A0A1W2PNN7 141 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 ATP5LO75964 103 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 SFTA2Q6UW10 78 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
SUDS3-202ENST00000541280 A0A0J9YXV3 536 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 F8VRH5 84 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 S100A1P23297 94 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 SRSF9Q13242 221 aaKnown RBP eCLIP3.52□□□□□ -1.85
SUDS3-202ENST00000541280 LBHQ53QV2 105 aaPredicted RBP3.52□□□□□ -1.85
SUDS3-202ENST00000541280 LINC00469Q8N7U9 141 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
SUDS3-202ENST00000541280 HBDP02042 147 aa3.51□□□□□ -1.85
SUDS3-202ENST00000541280 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
SUDS3-202ENST00000541280 IGLC3P0DOY3 106 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 VPREB1P12018 145 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 HNRNPA3P51991 378 aaKnown RBP3.5□□□□□ -1.85
SUDS3-202ENST00000541280 C2orf82Q6UX34 121 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 Q8NBF4 154 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 C18orf32Q8TCD1 76 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
SUDS3-202ENST00000541280 LINC00587B1AMM8 73 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 M0QXV9 152 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 NUPR1O60356 82 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 NDUFA6P56556 154 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 UBE2BP63146 152 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 COX17Q14061 63 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 C1orf137Q5JT78 98 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 PHF5AQ7RTV0 110 aaKnown RBP3.49□□□□□ -1.85
SUDS3-202ENST00000541280 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
SUDS3-202ENST00000541280 TRAV12-1A0A0B4J245 112 aa3.48□□□□□ -1.85
SUDS3-202ENST00000541280 SCO1O75880 301 aa3.48□□□□□ -1.85
SUDS3-202ENST00000541280 C9orf129Q5T035 196 aaKnown RBP3.48□□□□□ -1.85
SUDS3-202ENST00000541280 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
SUDS3-202ENST00000541280 C22orf24Q9Y442 160 aa3.48□□□□□ -1.85
SUDS3-202ENST00000541280 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
SUDS3-202ENST00000541280 FAT1Q14517 4588 aa3.48□□□□□ -1.85
SUDS3-202ENST00000541280 A0A096LNJ9 63 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 HSBP1O75506 76 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 MRPL55Q7Z7F7 128 aaKnown RBP3.47□□□□□ -1.85
SUDS3-202ENST00000541280 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 YPEL4Q96NS1 127 aa3.47□□□□□ -1.85
SUDS3-202ENST00000541280 CHTOPQ9Y3Y2 248 aaKnown RBP3.47□□□□□ -1.85
SUDS3-202ENST00000541280 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 ZNF861PO60384 105 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 SPINK8P0C7L1 97 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 ZNF22P17026 224 aaPredicted RBP3.46□□□□□ -1.86
SUDS3-202ENST00000541280 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 DNAH8Q96JB1 4490 aa3.46□□□□□ -1.86
SUDS3-202ENST00000541280 IGLV1-50A0A075B6I6 118 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 H0Y9J4 135 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 TRGC2P03986 189 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 RPL13AP40429 203 aaKnown RBP3.45□□□□□ -1.86
SUDS3-202ENST00000541280 RPL28P46779 137 aaKnown RBP3.45□□□□□ -1.86
SUDS3-202ENST00000541280 HERV-K104P63124 156 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 PMCHL1Q16048 86 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
SUDS3-202ENST00000541280 FLG2Q5D862 2391 aaPredicted RBP3.44□□□□□ -1.86
SUDS3-202ENST00000541280 TMEM223A0PJW6 202 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 C11orf86A6NJI1 115 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 BCE1O60756 84 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 PLNP26678 52 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 CTAG1AP78358 180 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 MAP1LC3CQ9BXW4 147 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 ERG28Q9UKR5 140 aa3.44□□□□□ -1.86
SUDS3-202ENST00000541280 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
SUDS3-202ENST00000541280 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
SUDS3-202ENST00000541280 PFN2P35080 140 aa3.43□□□□□ -1.86
SUDS3-202ENST00000541280 ZNF625Q96I27 306 aaPredicted RBP3.43□□□□□ -1.86
SUDS3-202ENST00000541280 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
SUDS3-202ENST00000541280 SND1-IT1Q9HBX3 110 aa3.43□□□□□ -1.86
SUDS3-202ENST00000541280 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
SUDS3-202ENST00000541280 COLCA2A8K830 154 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 NMUP48645 174 aa3.42□□□□□ -1.86
SUDS3-202ENST00000541280 LINC00158P58513 81 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms