RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CBLN2Q8IUK8 224 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 AMN1Q8IY45 258 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 Q8N377 158 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 NKAPP1Q8N9T2 125 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 SPRR4Q96PI1 79 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 C20orf78Q9BR46 151 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
SNHG1-214ENST00000540865 TRBV24-1A0A075B6N3 115 aa2.48□□□□□ -2.01
SNHG1-214ENST00000540865 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-214ENST00000540865 FAM231DQ6ZW35 169 aa2.48□□□□□ -2.01
SNHG1-214ENST00000540865 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
SNHG1-214ENST00000540865 GEMIN7Q9H840 131 aaKnown RBP2.48□□□□□ -2.01
SNHG1-214ENST00000540865 NDUFA13Q9P0J0 144 aa2.48□□□□□ -2.01
SNHG1-214ENST00000540865 TOMM7Q9P0U1 55 aa2.48□□□□□ -2.01
SNHG1-214ENST00000540865 ZNF706Q9Y5V0 76 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-214ENST00000540865 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 LINC00862A6NCI5 91 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 TEX46H3BTG2 121 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 M0R378 163 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 ARPC5O15511 151 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 IFI27P40305 119 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-214ENST00000540865 CXCL5P42830 114 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 Q6ZVQ6 151 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 TMEM141Q96I45 108 aa2.47□□□□□ -2.01
SNHG1-214ENST00000540865 HIGD1CA8MV81 97 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 TMEM238C9JI98 176 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 RIGQ13278 110 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 TEX43Q6ZNM6 134 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 LINC01551Q86U37 167 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 C2orf88Q9BSF0 95 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 SMIM2Q9BVW6 85 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 HIGD2AQ9BW72 106 aa2.46□□□□□ -2.02
SNHG1-214ENST00000540865 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
SNHG1-214ENST00000540865 SCO1O75880 301 aa2.45□□□□□ -2.02
SNHG1-214ENST00000540865 CKS2P33552 79 aa2.45□□□□□ -2.02
SNHG1-214ENST00000540865 TAGLN2P37802 199 aaKnown RBP2.45□□□□□ -2.02
SNHG1-214ENST00000540865 ZNF345Q14585 488 aa2.45□□□□□ -2.02
SNHG1-214ENST00000540865 MRPL51Q4U2R6 128 aaKnown RBP2.45□□□□□ -2.02
SNHG1-214ENST00000540865 SSBP3-AS1Q7Z2R9 100 aa2.45□□□□□ -2.02
SNHG1-214ENST00000540865 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 RAB5AP20339 215 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 DSCR10P59022 87 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 HERVK_113P63121 156 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 SEC11AP67812 179 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 LINC00483Q53H64 154 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 C2orf66Q6UXQ4 117 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 AMELXQ99217 191 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 VCX2Q9H322 139 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 CDKN2A-AS1Q9UH64 79 aa2.44□□□□□ -2.02
SNHG1-214ENST00000540865 A0A1B0GW15 77 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 KANTRA0A1W2PQU2 76 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 TMEM250H0YL14 139 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 RAB5BP61020 215 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 MOBPQ13875 183 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 PDZD11Q5EBL8 140 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 COX7B2Q8TF08 81 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 RPS10P5Q9NQ39 176 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 OSTCQ9NRP0 149 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 LINC00846Q9NV44 126 aa2.43□□□□□ -2.02
SNHG1-214ENST00000540865 C9orf92A6NGG3 77 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 HMSDA8MTL9 139 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 D6R8Y8 96 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 NPYP01303 97 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 PPBPP02775 128 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 HERV-K104P63124 156 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 LCE3CQ5T5A8 94 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 SMCR5Q8TEV8 140 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 NAT8BQ9UHF3 227 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
SNHG1-214ENST00000540865 IGIPA6NJ69 53 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 F8W036 122 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 ATP5LO75964 103 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 AKAP14Q86UN6 197 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 V9GYV3 84 aa2.41□□□□□ -2.02
SNHG1-214ENST00000540865 SMLR1H3BR10 107 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 ATP6V1G1O75348 118 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 S100A8P05109 93 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 PFN2P35080 140 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 SPRR1AP35321 89 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 NDUFV3P56181 108 aaKnown RBP2.4□□□□□ -2.03
SNHG1-214ENST00000540865 RAB14P61106 215 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 RPL37P61927 97 aaKnown RBP2.4□□□□□ -2.03
SNHG1-214ENST00000540865 FAM74A3Q4VXF1 159 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 ORMDL3Q8N138 153 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 Q8NDZ9 215 aa2.4□□□□□ -2.03
SNHG1-214ENST00000540865 KMT2DO14686 5537 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 LOC389332A0A1B0GUA5 103 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 ETDCA0A1B0GVM5 59 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 TINCRA0A1B0GVN0 87 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 SMIM27A0A1W2PRY6 76 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 COX17Q14061 63 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 ORMDL2Q53FV1 153 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 Q6Q795 121 aa2.39□□□□□ -2.03
SNHG1-214ENST00000540865 TMEM136Q6ZRR5 245 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms