RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	HSPB8	Q9UJY1	196 aa		11.92	□□□□□ -0.5
RAP1B-222	ENST00000540781	UBE2A	P49459	152 aa		11.91	□□□□□ -0.5
RAP1B-222	ENST00000540781	ATP6V1G1	O75348	118 aa		11.9	□□□□□ -0.5
RAP1B-222	ENST00000540781	RPL13A	P40429	203 aa	Known RBP	11.9	□□□□□ -0.5
RAP1B-222	ENST00000540781	MEIG1	Q5JSS6	88 aa		11.9	□□□□□ -0.5
RAP1B-222	ENST00000540781		Q8NDZ9	215 aa		11.9	□□□□□ -0.5
RAP1B-222	ENST00000540781	SMIM13	P0DJ93	91 aa		11.89	□□□□□ -0.51
RAP1B-222	ENST00000540781	HERV-K104	P63124	156 aa		11.89	□□□□□ -0.51
RAP1B-222	ENST00000540781	NDUFA12	Q9UI09	145 aa		11.89	□□□□□ -0.51
RAP1B-222	ENST00000540781	UBR4	Q5T4S7	5183 aa		11.88	□□□□□ -0.51
RAP1B-222	ENST00000540781	PLN	P26678	52 aa		11.88	□□□□□ -0.51
RAP1B-222	ENST00000540781	MYMX	A0A1B0GTQ4	84 aa		11.87	□□□□□ -0.51
RAP1B-222	ENST00000540781	KRTAP13-1	Q8IUC0	172 aa		11.87	□□□□□ -0.51
RAP1B-222	ENST00000540781	LEPROT	O15243	131 aa		11.86	□□□□□ -0.51
RAP1B-222	ENST00000540781	DPM2	O94777	84 aa		11.86	□□□□□ -0.51
RAP1B-222	ENST00000540781	PMCHL2	Q9BQD1	86 aa		11.86	□□□□□ -0.51
RAP1B-222	ENST00000540781	TMEM126A	Q9H061	195 aa		11.86	□□□□□ -0.51
RAP1B-222	ENST00000540781	LINC00587	B1AMM8	73 aa		11.85	□□□□□ -0.51
RAP1B-222	ENST00000540781	TMEM238	C9JI98	176 aa		11.85	□□□□□ -0.51
RAP1B-222	ENST00000540781	MIR7-3HG	Q8N6C7	128 aa		11.85	□□□□□ -0.51
RAP1B-222	ENST00000540781	PLEKHB2	Q96CS7	222 aa		11.85	□□□□□ -0.51
RAP1B-222	ENST00000540781	TSPEAR-AS2	P59090	65 aa		11.84	□□□□□ -0.51
RAP1B-222	ENST00000540781	FAM19A1	Q7Z5A9	133 aa		11.84	□□□□□ -0.51
RAP1B-222	ENST00000540781		M0R378	163 aa		11.83	□□□□□ -0.52
RAP1B-222	ENST00000540781	IGKC	P01834	107 aa		11.83	□□□□□ -0.52
RAP1B-222	ENST00000540781	HERVK_113	P61574	105 aa		11.83	□□□□□ -0.52
RAP1B-222	ENST00000540781	BOD1L2	Q8IYS8	172 aa		11.83	□□□□□ -0.52
RAP1B-222	ENST00000540781	MAP1LC3C	Q9BXW4	147 aa		11.83	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BK	O60814	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BJ	P06899	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BO	P23527	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BB	P33778	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BD	P58876	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BC	P62807	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	PRLH	P81277	87 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST2H2BE	Q16778	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BH	Q93079	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BN	Q99877	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781	HIST1H2BM	Q99879	126 aa		11.82	□□□□□ -0.52
RAP1B-222	ENST00000540781		J3QQQ9	107 aa		11.81	□□□□□ -0.52
RAP1B-222	ENST00000540781	CRYGA	P11844	174 aa		11.8	□□□□□ -0.52
RAP1B-222	ENST00000540781		A0A087X002	238 aa		11.79	□□□□□ -0.52
RAP1B-222	ENST00000540781	LGALS3	P17931	250 aa	Known RBP	11.79	□□□□□ -0.52
RAP1B-222	ENST00000540781	LRP2	P98164	4655 aa		11.79	□□□□□ -0.52
RAP1B-222	ENST00000540781	ANAPC11	Q9NYG5	84 aa		11.79	□□□□□ -0.52
RAP1B-222	ENST00000540781	NCR3	O14931	201 aa		11.77	□□□□□ -0.53
RAP1B-222	ENST00000540781	NMU	P48645	174 aa		11.77	□□□□□ -0.53
RAP1B-222	ENST00000540781	TYMSOS	Q8TAI1	123 aa		11.76	□□□□□ -0.53
RAP1B-222	ENST00000540781	SYS1-DBNDD2	H3BUS1	97 aa		11.75	□□□□□ -0.53
RAP1B-222	ENST00000540781	DAND5	Q8N907	189 aa		11.75	□□□□□ -0.53
RAP1B-222	ENST00000540781	IGKV2D-26	A0A0A0MRZ7	120 aa		11.74	□□□□□ -0.53
RAP1B-222	ENST00000540781	FAM229B	Q4G0N7	80 aa		11.74	□□□□□ -0.53
RAP1B-222	ENST00000540781	PRY	O14603	147 aa		11.73	□□□□□ -0.53
RAP1B-222	ENST00000540781	HIGD2A	Q9BW72	106 aa		11.73	□□□□□ -0.53
RAP1B-222	ENST00000540781	LOC107984156	A0A0G2JMH3	177 aa		11.71	□□□□□ -0.53
RAP1B-222	ENST00000540781		E9PLD3	99 aa		11.71	□□□□□ -0.53
RAP1B-222	ENST00000540781	KRTAP13-2	Q52LG2	175 aa		11.71	□□□□□ -0.53
RAP1B-222	ENST00000540781	ARL17A	Q8IVW1	177 aa		11.71	□□□□□ -0.53
RAP1B-222	ENST00000540781	KCNQ1DN	Q9H478	68 aa		11.71	□□□□□ -0.53
RAP1B-222	ENST00000540781	TRBV10-3	A0A0K0K1G6	114 aa		11.7	□□□□□ -0.54
RAP1B-222	ENST00000540781	TSPAN13	O95857	204 aa		11.7	□□□□□ -0.54
RAP1B-222	ENST00000540781	PET117	Q6UWS5	81 aa		11.7	□□□□□ -0.54
RAP1B-222	ENST00000540781	LINC01545	Q5VT33	79 aa		11.69	□□□□□ -0.54
RAP1B-222	ENST00000540781	MIEN1	Q9BRT3	115 aa		11.69	□□□□□ -0.54
RAP1B-222	ENST00000540781		A0A0J9YXY3	114 aa		11.68	□□□□□ -0.54
RAP1B-222	ENST00000540781	SPRR1A	P35321	89 aa		11.68	□□□□□ -0.54
RAP1B-222	ENST00000540781	LINC00337	Q8N6G1	96 aa		11.68	□□□□□ -0.54
RAP1B-222	ENST00000540781	ETDC	A0A1B0GVM5	59 aa		11.67	□□□□□ -0.54
RAP1B-222	ENST00000540781	S100A12	P80511	92 aa		11.67	□□□□□ -0.54
RAP1B-222	ENST00000540781	PRR4	Q16378	134 aa		11.67	□□□□□ -0.54
RAP1B-222	ENST00000540781	TRBV10-2	A0A0K0K1G8	114 aa		11.66	□□□□□ -0.54
RAP1B-222	ENST00000540781	COA6	Q5JTJ3	125 aa	Known RBP	11.66	□□□□□ -0.54
RAP1B-222	ENST00000540781	C3orf79	P0CE67	100 aa		11.65	□□□□□ -0.54
RAP1B-222	ENST00000540781	DDT	P30046	118 aa		11.65	□□□□□ -0.54
RAP1B-222	ENST00000540781	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.65	□□□□□ -0.54
RAP1B-222	ENST00000540781	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.64	□□□□□ -0.55
RAP1B-222	ENST00000540781	ADAMTSL4-AS1	Q5T5F5	129 aa		11.64	□□□□□ -0.55
RAP1B-222	ENST00000540781	NDUFC2	O95298	119 aa		11.63	□□□□□ -0.55
RAP1B-222	ENST00000540781	NPC2	P61916	151 aa		11.63	□□□□□ -0.55
RAP1B-222	ENST00000540781	SPRR4	Q96PI1	79 aa		11.63	□□□□□ -0.55
RAP1B-222	ENST00000540781	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.63	□□□□□ -0.55
RAP1B-222	ENST00000540781	KRTDAP	P60985	99 aa		11.62	□□□□□ -0.55
RAP1B-222	ENST00000540781	SOSTDC1	Q6X4U4	206 aa		11.62	□□□□□ -0.55
RAP1B-222	ENST00000540781	LINC00304	Q8N9R0	145 aa		11.62	□□□□□ -0.55
RAP1B-222	ENST00000540781	SMCR5	Q8TEV8	140 aa		11.62	□□□□□ -0.55
RAP1B-222	ENST00000540781	S100A7L2	Q5SY68	101 aa		11.61	□□□□□ -0.55
RAP1B-222	ENST00000540781	EIF4EBP3	O60516	100 aa	Predicted RBP	11.6	□□□□□ -0.55
RAP1B-222	ENST00000540781	C3orf22	Q8N5N4	141 aa		11.6	□□□□□ -0.55
RAP1B-222	ENST00000540781		B5MCH6	92 aa		11.59	□□□□□ -0.55
RAP1B-222	ENST00000540781	ZNF815P	A8K554	130 aa		11.58	□□□□□ -0.56
RAP1B-222	ENST00000540781	IGLV6-57	P01721	117 aa		11.58	□□□□□ -0.56
RAP1B-222	ENST00000540781	LPA	P08519	4548 aa		11.58	□□□□□ -0.56
RAP1B-222	ENST00000540781	TIMM17B	O60830	172 aa		11.57	□□□□□ -0.56
RAP1B-222	ENST00000540781	LITAF	Q99732	161 aa		11.57	□□□□□ -0.56
RAP1B-222	ENST00000540781	C20orf202	A1L168	122 aa		11.56	□□□□□ -0.56
RAP1B-222	ENST00000540781	LINC00308	Q8TCZ7	52 aa		11.56	□□□□□ -0.56
RAP1B-222	ENST00000540781	TTTY13	Q9BZ97	58 aa		11.56	□□□□□ -0.56
RAP1B-222	ENST00000540781	PPDPF	Q9H3Y8	114 aa		11.56	□□□□□ -0.56
RAP1B-222	ENST00000540781	TRAV23DV6	A0A075B6W5	121 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms