RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
PBX1-212ENST00000540236 IGKV2-24A0A0C4DH68 120 aa7.54□□□□□ -1.2
PBX1-212ENST00000540236 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
PBX1-212ENST00000540236 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
PBX1-212ENST00000540236 TECTAO75443 2155 aa7.54□□□□□ -1.2
PBX1-212ENST00000540236 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
PBX1-212ENST00000540236 Q1T7F1 81 aa7.52□□□□□ -1.2
PBX1-212ENST00000540236 COA5Q86WW8 74 aa7.52□□□□□ -1.2
PBX1-212ENST00000540236 EPM2AB3EWF7 344 aa7.52□□□□□ -1.21
PBX1-212ENST00000540236 PRO0255Q9UI72 69 aa7.52□□□□□ -1.21
PBX1-212ENST00000540236 A0A087WSZ3 146 aa7.52□□□□□ -1.21
PBX1-212ENST00000540236 LY6G6DO95868 133 aa7.52□□□□□ -1.21
PBX1-212ENST00000540236 C11orf71Q6IPW1 123 aa7.52□□□□□ -1.21
PBX1-212ENST00000540236 C16orf90A8MZG2 172 aa7.5□□□□□ -1.21
PBX1-212ENST00000540236 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
PBX1-212ENST00000540236 GPR179Q6PRD1 2367 aa7.5□□□□□ -1.21
PBX1-212ENST00000540236 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
PBX1-212ENST00000540236 LCA10Q71F78 164 aa7.5□□□□□ -1.21
PBX1-212ENST00000540236 LAMA5O15230 3695 aa7.49□□□□□ -1.21
PBX1-212ENST00000540236 A0A096LNT2 108 aa7.49□□□□□ -1.21
PBX1-212ENST00000540236 Q5VV11 94 aa7.48□□□□□ -1.21
PBX1-212ENST00000540236 ZNF702PQ9H963 129 aa7.47□□□□□ -1.21
PBX1-212ENST00000540236 OCR1Q9BZK8 76 aa7.47□□□□□ -1.21
PBX1-212ENST00000540236 ERC2-IT1O76042 136 aa7.46□□□□□ -1.21
PBX1-212ENST00000540236 A0A1W2PPR1 153 aa7.46□□□□□ -1.21
PBX1-212ENST00000540236 ELOF1P60002 83 aaKnown RBP7.46□□□□□ -1.21
PBX1-212ENST00000540236 ATP11AUNQ6ZP68 121 aa7.46□□□□□ -1.21
PBX1-212ENST00000540236 CMC4P56277 68 aaPredicted RBP7.46□□□□□ -1.22
PBX1-212ENST00000540236 Q6ZRU5 148 aa7.46□□□□□ -1.22
PBX1-212ENST00000540236 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
PBX1-212ENST00000540236 TRANK1O15050 2925 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 CHD9Q3L8U1 2897 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 LINC00588Q9Y4M8 146 aa7.45□□□□□ -1.22
PBX1-212ENST00000540236 GVINP1Q7Z2Y8 2422 aa7.44□□□□□ -1.22
PBX1-212ENST00000540236 SPTAN1Q13813 2472 aaKnown RBP7.44□□□□□ -1.22
PBX1-212ENST00000540236 Q8NDZ9 215 aa7.44□□□□□ -1.22
PBX1-212ENST00000540236 LINC00313P59037 77 aa7.43□□□□□ -1.22
PBX1-212ENST00000540236 ZZEF1O43149 2961 aa7.43□□□□□ -1.22
PBX1-212ENST00000540236 SPINK1P00995 79 aa7.42□□□□□ -1.22
PBX1-212ENST00000540236 VPREB1P12018 145 aa7.42□□□□□ -1.22
PBX1-212ENST00000540236 DSPP15924 2871 aaKnown RBP7.42□□□□□ -1.22
PBX1-212ENST00000540236 SVEP1Q4LDE5 3571 aa7.42□□□□□ -1.22
PBX1-212ENST00000540236 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
PBX1-212ENST00000540236 PRO3102Q9H379 93 aa7.41□□□□□ -1.22
PBX1-212ENST00000540236 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
PBX1-212ENST00000540236 PRLHP81277 87 aa7.41□□□□□ -1.22
PBX1-212ENST00000540236 MOBPQ13875 183 aa7.4□□□□□ -1.22
PBX1-212ENST00000540236 SPTA1P02549 2419 aa7.4□□□□□ -1.22
PBX1-212ENST00000540236 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
PBX1-212ENST00000540236 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
PBX1-212ENST00000540236 RELNP78509 3460 aa7.39□□□□□ -1.23
PBX1-212ENST00000540236 C2CD3Q4AC94 2353 aa7.39□□□□□ -1.23
PBX1-212ENST00000540236 WNK1Q9H4A3 2382 aa7.39□□□□□ -1.23
PBX1-212ENST00000540236 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
PBX1-212ENST00000540236 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
PBX1-212ENST00000540236 DMXL2Q8TDJ6 3036 aa7.38□□□□□ -1.23
PBX1-212ENST00000540236 SPART-AS1P0CW21 52 aa7.37□□□□□ -1.23
PBX1-212ENST00000540236 IGLV1-51P01701 117 aa7.37□□□□□ -1.23
PBX1-212ENST00000540236 TRIOBPQ9H2D6 2365 aa7.36□□□□□ -1.23
PBX1-212ENST00000540236 Q9BRP9 147 aa7.36□□□□□ -1.23
PBX1-212ENST00000540236 A0A1B0GU69 56 aa7.36□□□□□ -1.23
PBX1-212ENST00000540236 SPINK7P58062 85 aa7.36□□□□□ -1.23
PBX1-212ENST00000540236 Q6YL49 198 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 C7orf33Q8WU49 177 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 LINC00476Q8WZB0 136 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 KALRNO60229 2985 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
PBX1-212ENST00000540236 UBE2DNLQ8IWF7 75 aa7.34□□□□□ -1.23
PBX1-212ENST00000540236 NBASA2RRP1 2371 aa7.34□□□□□ -1.23
PBX1-212ENST00000540236 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.24
PBX1-212ENST00000540236 EP300Q09472 2414 aaPredicted RBP7.33□□□□□ -1.24
PBX1-212ENST00000540236 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
PBX1-212ENST00000540236 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
PBX1-212ENST00000540236 PIEZO2Q9H5I5 2752 aa7.32□□□□□ -1.24
PBX1-212ENST00000540236 Q8N377 158 aa7.32□□□□□ -1.24
PBX1-212ENST00000540236 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
PBX1-212ENST00000540236 LOC400499M0QZD8 3231 aa7.31□□□□□ -1.24
PBX1-212ENST00000540236 DSCR9P59020 149 aa7.31□□□□□ -1.24
PBX1-212ENST00000540236 CR1P17927 2039 aa7.31□□□□□ -1.24
PBX1-212ENST00000540236 LINC01554Q52M75 96 aa7.31□□□□□ -1.24
PBX1-212ENST00000540236 Q8NBF4 154 aa7.3□□□□□ -1.24
PBX1-212ENST00000540236 ACACAQ13085 2346 aa7.3□□□□□ -1.24
PBX1-212ENST00000540236 LELP1Q5T871 98 aa7.3□□□□□ -1.24
PBX1-212ENST00000540236 A0A1W2PNM2 257 aa7.29□□□□□ -1.24
PBX1-212ENST00000540236 EGFEM1PQ0D2K5 195 aa7.28□□□□□ -1.24
PBX1-212ENST00000540236 Q75L30 129 aa7.28□□□□□ -1.24
PBX1-212ENST00000540236 CREBBPQ92793 2442 aa7.27□□□□□ -1.25
PBX1-212ENST00000540236 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
PBX1-212ENST00000540236 DSCR10P59022 87 aa7.27□□□□□ -1.25
PBX1-212ENST00000540236 Q8NAQ8 132 aa7.26□□□□□ -1.25
PBX1-212ENST00000540236 BOD1L1Q8NFC6 3051 aa7.26□□□□□ -1.25
PBX1-212ENST00000540236 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
PBX1-212ENST00000540236 ZFHX3Q15911 3703 aa7.25□□□□□ -1.25
PBX1-212ENST00000540236 FBXL19-AS1Q494R0 122 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms