RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 LBHQ53QV2 105 aaPredicted RBP13.63□□□□□ -0.23
TRIM65-202ENST00000540128 C20orf202A1L168 122 aa13.62□□□□□ -0.23
TRIM65-202ENST00000540128 LGALS3P17931 250 aaKnown RBP13.62□□□□□ -0.23
TRIM65-202ENST00000540128 S100A2P29034 98 aa13.62□□□□□ -0.23
TRIM65-202ENST00000540128 SMIM13P0DJ93 91 aa13.61□□□□□ -0.23
TRIM65-202ENST00000540128 AKR1D1P51857 326 aa13.6□□□□□ -0.23
TRIM65-202ENST00000540128 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■□□ 17.9
TRIM65-202ENST00000540128 MEIG1Q5JSS6 88 aa13.6□□□□□ -0.23
TRIM65-202ENST00000540128 MRPL55Q7Z7F7 128 aaKnown RBP13.6□□□□□ -0.23
TRIM65-202ENST00000540128 A0A0U1RRA0 63 aa13.58□□□□□ -0.24
TRIM65-202ENST00000540128 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
TRIM65-202ENST00000540128 VPREB1P12018 145 aa13.58□□□□□ -0.24
TRIM65-202ENST00000540128 SNRPEP62304 92 aaKnown RBP13.58□□□□□ -0.24
TRIM65-202ENST00000540128 UBE2BP63146 152 aa13.58□□□□□ -0.24
TRIM65-202ENST00000540128 PKHD1L1Q86WI1 4243 aa13.56□□□□□ -0.24
TRIM65-202ENST00000540128 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
TRIM65-202ENST00000540128 C1orf137Q5JT78 98 aa13.56□□□□□ -0.24
TRIM65-202ENST00000540128 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
TRIM65-202ENST00000540128 LINC00167Q96N53 147 aa13.56□□□□□ -0.24
TRIM65-202ENST00000540128 KRTAP29-1A8MX34 341 aaPredicted RBP13.55□□□□□ -0.24
TRIM65-202ENST00000540128 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
TRIM65-202ENST00000540128 NKAPP1Q8N9T2 125 aa13.55□□□□□ -0.24
TRIM65-202ENST00000540128 Q8NDZ9 215 aa13.54□□□□□ -0.24
TRIM65-202ENST00000540128 MYCBP2O75592 4640 aa13.53□□□□□ -0.24
TRIM65-202ENST00000540128 IGKV2D-26A0A0A0MRZ7 120 aa13.53□□□□□ -0.24
TRIM65-202ENST00000540128 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
TRIM65-202ENST00000540128 IGLV7-43P04211 117 aa13.53□□□□□ -0.24
TRIM65-202ENST00000540128 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
TRIM65-202ENST00000540128 A0A0J9YXY3 114 aa13.52□□□□□ -0.25
TRIM65-202ENST00000540128 OXTP01178 125 aa13.52□□□□□ -0.25
TRIM65-202ENST00000540128 ATOH7Q8N100 152 aa13.5□□□□□ -0.25
TRIM65-202ENST00000540128 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
TRIM65-202ENST00000540128 GAGE10A6NGK3 116 aa13.49□□□□□ -0.25
TRIM65-202ENST00000540128 ANKRD39Q53RE8 183 aa13.49□□□□□ -0.25
TRIM65-202ENST00000540128 RPL37AP8A6NKH3 93 aa13.48□□□□□ -0.25
TRIM65-202ENST00000540128 BOD1L2Q8IYS8 172 aa13.48□□□□□ -0.25
TRIM65-202ENST00000540128 TIMM17BO60830 172 aa13.47□□□□□ -0.25
TRIM65-202ENST00000540128 ADAMTSL4-AS1Q5T5F5 129 aa13.47□□□□□ -0.25
TRIM65-202ENST00000540128 DAND5Q8N907 189 aa13.47□□□□□ -0.25
TRIM65-202ENST00000540128 IGLV1-50A0A075B6I6 118 aa13.46□□□□□ -0.25
TRIM65-202ENST00000540128 ZNF815PA8K554 130 aa13.46□□□□□ -0.25
TRIM65-202ENST00000540128 TTTY13Q9BZ97 58 aa13.46□□□□□ -0.25
TRIM65-202ENST00000540128 M0R378 163 aa13.45□□□□□ -0.26
TRIM65-202ENST00000540128 LITAFQ99732 161 aa13.45□□□□□ -0.26
TRIM65-202ENST00000540128 BCE1O60756 84 aa13.43□□□□□ -0.26
TRIM65-202ENST00000540128 LRP1Q07954 4544 aaKnown RBP13.43□□□□□ -0.26
TRIM65-202ENST00000540128 DIRC1Q969H9 104 aa13.42□□□□□ -0.26
TRIM65-202ENST00000540128 IGKV2-28A0A075B6P5 120 aa13.41□□□□□ -0.26
TRIM65-202ENST00000540128 J3QL48 77 aa13.41□□□□□ -0.26
TRIM65-202ENST00000540128 ZNF861PO60384 105 aa13.41□□□□□ -0.26
TRIM65-202ENST00000540128 IGKV2D-28P01615 120 aa13.41□□□□□ -0.26
TRIM65-202ENST00000540128 REG3GQ6UW15 175 aa13.41□□□□□ -0.26
TRIM65-202ENST00000540128 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
TRIM65-202ENST00000540128 FAT3Q8TDW7 4589 aa13.39□□□□□ -0.27
TRIM65-202ENST00000540128 NDUFC2O95298 119 aa13.39□□□□□ -0.27
TRIM65-202ENST00000540128 LINC01600Q96MT4 127 aa13.39□□□□□ -0.27
TRIM65-202ENST00000540128 MIEN1Q9BRT3 115 aa13.39□□□□□ -0.27
TRIM65-202ENST00000540128 TRBV10-2A0A0K0K1G8 114 aa13.38□□□□□ -0.27
TRIM65-202ENST00000540128 H0Y9J4 135 aa13.38□□□□□ -0.27
TRIM65-202ENST00000540128 EIF4EBP3O60516 100 aaPredicted RBP13.38□□□□□ -0.27
TRIM65-202ENST00000540128 SCGB1D1O95968 90 aa13.38□□□□□ -0.27
TRIM65-202ENST00000540128 PCP2Q8IVA1 136 aa13.38□□□□□ -0.27
TRIM65-202ENST00000540128 HSBP1L1C9JCN9 74 aa13.36□□□□□ -0.27
TRIM65-202ENST00000540128 NCR3O14931 201 aa13.36□□□□□ -0.27
TRIM65-202ENST00000540128 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
TRIM65-202ENST00000540128 KRTAP13-1Q8IUC0 172 aa13.36□□□□□ -0.27
TRIM65-202ENST00000540128 LINC00308Q8TCZ7 52 aa13.36□□□□□ -0.27
TRIM65-202ENST00000540128 TMEM126AQ9H061 195 aa13.36□□□□□ -0.27
TRIM65-202ENST00000540128 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
TRIM65-202ENST00000540128 MT1HL1P0DM35 61 aa13.35□□□□□ -0.27
TRIM65-202ENST00000540128 SCGB1D4Q6XE38 83 aa13.34□□□□□ -0.27
TRIM65-202ENST00000540128 KCNQ1DNQ9H478 68 aa13.34□□□□□ -0.27
TRIM65-202ENST00000540128 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
TRIM65-202ENST00000540128 TRBV10-3A0A0K0K1G6 114 aa13.32□□□□□ -0.28
TRIM65-202ENST00000540128 NPC2P61916 151 aa13.32□□□□□ -0.28
TRIM65-202ENST00000540128 SPANXDQ9BXN6 97 aa13.32□□□□□ -0.28
TRIM65-202ENST00000540128 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
TRIM65-202ENST00000540128 PRYO14603 147 aa13.31□□□□□ -0.28
TRIM65-202ENST00000540128 PPDPFQ9H3Y8 114 aa13.31□□□□□ -0.28
TRIM65-202ENST00000540128 HERC1Q15751 4861 aa13.3□□□□□ -0.28
TRIM65-202ENST00000540128 SPRR1AP35321 89 aa13.3□□□□□ -0.28
TRIM65-202ENST00000540128 UBE2AP49459 152 aa13.3□□□□□ -0.28
TRIM65-202ENST00000540128 Q6ZVH6 145 aa13.3□□□□□ -0.28
TRIM65-202ENST00000540128 IGLV6-57P01721 117 aa13.29□□□□□ -0.28
TRIM65-202ENST00000540128 KRTAP10-8P60410 259 aa13.29□□□□□ -0.28
TRIM65-202ENST00000540128 KRTAP1-4P0C5Y4 121 aa13.28□□□□□ -0.28
TRIM65-202ENST00000540128 JOSD1Q15040 202 aaPredicted RBP13.28□□□□□ -0.28
TRIM65-202ENST00000540128 IFITM1P13164 125 aa13.27□□□□□ -0.29
TRIM65-202ENST00000540128 DDTP30046 118 aa13.27□□□□□ -0.29
TRIM65-202ENST00000540128 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
TRIM65-202ENST00000540128 KRTAP4-16G5E9R7 235 aaPredicted RBP13.26□□□□□ -0.29
TRIM65-202ENST00000540128 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
TRIM65-202ENST00000540128 COPS9Q8WXC6 57 aa13.26□□□□□ -0.29
TRIM65-202ENST00000540128 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
TRIM65-202ENST00000540128 S100A12P80511 92 aa13.24□□□□□ -0.29
TRIM65-202ENST00000540128 PRLHP81277 87 aa13.24□□□□□ -0.29
TRIM65-202ENST00000540128 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
TRIM65-202ENST00000540128 LINC00518Q8N0U6 118 aa13.23□□□□□ -0.29
TRIM65-202ENST00000540128 COX8AP10176 69 aa13.22□□□□□ -0.29
TRIM65-202ENST00000540128 DLEU1O43261 78 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms