RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 RPL37AP8A6NKH3 93 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 LEPROTL1O95214 131 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 FABP4P15090 132 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 UBE2AP49459 152 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
PBX3-212ENST00000538998 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
PBX3-212ENST00000538998 ZC2HC1BQ5TFG8 222 aa8.1□□□□□ -1.11
PBX3-212ENST00000538998 F8VRH5 84 aa8.09□□□□□ -1.11
PBX3-212ENST00000538998 LINC00310P59036 64 aa8.09□□□□□ -1.11
PBX3-212ENST00000538998 PMVKQ15126 192 aa8.09□□□□□ -1.11
PBX3-212ENST00000538998 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
PBX3-212ENST00000538998 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.11
PBX3-212ENST00000538998 ASB16-AS1Q495Z4 193 aa8.08□□□□□ -1.12
PBX3-212ENST00000538998 COA6Q5JTJ3 125 aaKnown RBP8.08□□□□□ -1.12
PBX3-212ENST00000538998 AMELXQ99217 191 aa8.08□□□□□ -1.12
PBX3-212ENST00000538998 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
PBX3-212ENST00000538998 H0Y8G0 127 aa8.07□□□□□ -1.12
PBX3-212ENST00000538998 SEC11AP67812 179 aa8.07□□□□□ -1.12
PBX3-212ENST00000538998 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
PBX3-212ENST00000538998 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
PBX3-212ENST00000538998 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
PBX3-212ENST00000538998 S100A2P29034 98 aa8.06□□□□□ -1.12
PBX3-212ENST00000538998 CXCL5P42830 114 aa8.06□□□□□ -1.12
PBX3-212ENST00000538998 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
PBX3-212ENST00000538998 IGLV5-37A0A075B6J1 123 aa8.05□□□□□ -1.12
PBX3-212ENST00000538998 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
PBX3-212ENST00000538998 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
PBX3-212ENST00000538998 NKAPP1Q8N9T2 125 aa8.04□□□□□ -1.12
PBX3-212ENST00000538998 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
PBX3-212ENST00000538998 HERVK_113P63121 156 aa8.03□□□□□ -1.12
PBX3-212ENST00000538998 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
PBX3-212ENST00000538998 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
PBX3-212ENST00000538998 TRAV12-1A0A0B4J245 112 aa8.02□□□□□ -1.13
PBX3-212ENST00000538998 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
PBX3-212ENST00000538998 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
PBX3-212ENST00000538998 SNRPEP62304 92 aaKnown RBP8.02□□□□□ -1.13
PBX3-212ENST00000538998 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
PBX3-212ENST00000538998 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
PBX3-212ENST00000538998 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
PBX3-212ENST00000538998 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
PBX3-212ENST00000538998 KRTDAPP60985 99 aa8.01□□□□□ -1.13
PBX3-212ENST00000538998 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
PBX3-212ENST00000538998 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
PBX3-212ENST00000538998 H3BRM9 83 aa8□□□□□ -1.13
PBX3-212ENST00000538998 PRLHP81277 87 aa8□□□□□ -1.13
PBX3-212ENST00000538998 HIST3H2BBQ8N257 126 aa8□□□□□ -1.13
PBX3-212ENST00000538998 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
PBX3-212ENST00000538998 TMEM170BQ5T4T1 132 aa7.99□□□□□ -1.13
PBX3-212ENST00000538998 FAM19A1Q7Z5A9 133 aa7.99□□□□□ -1.13
PBX3-212ENST00000538998 SYS1-DBNDD2H3BUS1 97 aa7.98□□□□□ -1.13
PBX3-212ENST00000538998 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
PBX3-212ENST00000538998 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
PBX3-212ENST00000538998 C20orf202A1L168 122 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 C5orf52A6NGY3 159 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 C11orf86A6NJI1 115 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 HIST1H2BLQ99880 126 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
PBX3-212ENST00000538998 SMIM1B2RUZ4 78 aa7.96□□□□□ -1.14
PBX3-212ENST00000538998 DPM2O94777 84 aa7.96□□□□□ -1.14
PBX3-212ENST00000538998 PLNP26678 52 aa7.96□□□□□ -1.14
PBX3-212ENST00000538998 COX7B2Q8TF08 81 aa7.96□□□□□ -1.14
PBX3-212ENST00000538998 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
PBX3-212ENST00000538998 IGKCP01834 107 aa7.95□□□□□ -1.14
PBX3-212ENST00000538998 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
PBX3-212ENST00000538998 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
PBX3-212ENST00000538998 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
PBX3-212ENST00000538998 M0R378 163 aa7.92□□□□□ -1.14
PBX3-212ENST00000538998 HERVK_113P61574 105 aa7.92□□□□□ -1.14
PBX3-212ENST00000538998 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
PBX3-212ENST00000538998 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
PBX3-212ENST00000538998 AKR1D1P51857 326 aa7.91□□□□□ -1.14
PBX3-212ENST00000538998 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
PBX3-212ENST00000538998 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
PBX3-212ENST00000538998 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
PBX3-212ENST00000538998 SPINK1P00995 79 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 CFC1BP0CG36 223 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 VPREB1P12018 145 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 DAND5Q8N907 189 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 Q8NBF4 154 aa7.9□□□□□ -1.14
PBX3-212ENST00000538998 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
PBX3-212ENST00000538998 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
PBX3-212ENST00000538998 RPL24P83731 157 aaKnown RBP7.89□□□□□ -1.15
PBX3-212ENST00000538998 PFN2P35080 140 aa7.88□□□□□ -1.15
PBX3-212ENST00000538998 ATOH7Q8N100 152 aa7.88□□□□□ -1.15
PBX3-212ENST00000538998 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
PBX3-212ENST00000538998 LEPROTO15243 131 aa7.86□□□□□ -1.15
PBX3-212ENST00000538998 LGALS3P17931 250 aaKnown RBP7.86□□□□□ -1.15
PBX3-212ENST00000538998 XP32Q5T750 250 aa7.86□□□□□ -1.15
PBX3-212ENST00000538998 SND1-IT1Q9HBX3 110 aa7.86□□□□□ -1.15
PBX3-212ENST00000538998 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
PBX3-212ENST00000538998 MT1HP80294 61 aa7.85□□□□□ -1.15
PBX3-212ENST00000538998 E9PLD3 99 aa7.84□□□□□ -1.15
PBX3-212ENST00000538998 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.15
PBX3-212ENST00000538998 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
PBX3-212ENST00000538998 J3QQQ9 107 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms