RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 CEND1Q8N111 149 aa6.94□□□□□ -1.3
TNFRSF1A-211ENST00000538363 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 SLPIP03973 132 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 XAGE1AQ9HD64 81 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
TNFRSF1A-211ENST00000538363 A6NDN8 102 aa6.92□□□□□ -1.3
TNFRSF1A-211ENST00000538363 C9orf163Q8N9P6 203 aa6.92□□□□□ -1.3
TNFRSF1A-211ENST00000538363 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
TNFRSF1A-211ENST00000538363 NKAPP1Q8N9T2 125 aa6.91□□□□□ -1.3
TNFRSF1A-211ENST00000538363 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
TNFRSF1A-211ENST00000538363 LITAFQ99732 161 aa6.91□□□□□ -1.3
TNFRSF1A-211ENST00000538363 LINC00474Q9P2X8 69 aa6.91□□□□□ -1.3
TNFRSF1A-211ENST00000538363 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
TNFRSF1A-211ENST00000538363 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
TNFRSF1A-211ENST00000538363 Q6ZRP5 223 aa6.9□□□□□ -1.3
TNFRSF1A-211ENST00000538363 A4D1N5 150 aa6.89□□□□□ -1.31
TNFRSF1A-211ENST00000538363 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
TNFRSF1A-211ENST00000538363 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
TNFRSF1A-211ENST00000538363 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
TNFRSF1A-211ENST00000538363 C16orf90A8MZG2 172 aa6.88□□□□□ -1.31
TNFRSF1A-211ENST00000538363 Q1RN00 199 aa6.88□□□□□ -1.31
TNFRSF1A-211ENST00000538363 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
TNFRSF1A-211ENST00000538363 A0A096LNI7 61 aa6.87□□□□□ -1.31
TNFRSF1A-211ENST00000538363 H7C2G1 150 aa6.87□□□□□ -1.31
TNFRSF1A-211ENST00000538363 NCR3O14931 201 aa6.87□□□□□ -1.31
TNFRSF1A-211ENST00000538363 FXYD2P54710 66 aa6.87□□□□□ -1.31
TNFRSF1A-211ENST00000538363 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
TNFRSF1A-211ENST00000538363 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
TNFRSF1A-211ENST00000538363 SOSTDC1Q6X4U4 206 aa6.86□□□□□ -1.31
TNFRSF1A-211ENST00000538363 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
TNFRSF1A-211ENST00000538363 H3BS24 57 aa6.85□□□□□ -1.31
TNFRSF1A-211ENST00000538363 NDUFC2O95298 119 aa6.85□□□□□ -1.31
TNFRSF1A-211ENST00000538363 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
TNFRSF1A-211ENST00000538363 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
TNFRSF1A-211ENST00000538363 M0R378 163 aa6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 PSMB2P49721 201 aa6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 LBHQ53QV2 105 aaPredicted RBP6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 PRO1854Q9UHT4 67 aa6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 CBY1Q9Y3M2 126 aa6.84□□□□□ -1.31
TNFRSF1A-211ENST00000538363 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.32
TNFRSF1A-211ENST00000538363 LOC107984156A0A0G2JMH3 177 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 CFC1BP0CG36 223 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 CFC1P0CG37 223 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 RPL13AP40429 203 aaKnown RBP6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 UBE2BP63146 152 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 ARL17AQ8IVW1 177 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
TNFRSF1A-211ENST00000538363 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
TNFRSF1A-211ENST00000538363 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
TNFRSF1A-211ENST00000538363 SNHG12Q9BXW3 62 aa6.82□□□□□ -1.32
TNFRSF1A-211ENST00000538363 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
TNFRSF1A-211ENST00000538363 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
TNFRSF1A-211ENST00000538363 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 K7ERJ3 54 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 M0QXV9 152 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 VPREB1P12018 145 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
TNFRSF1A-211ENST00000538363 SERTAD4-AS1Q5TG53 156 aa6.8□□□□□ -1.32
TNFRSF1A-211ENST00000538363 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
TNFRSF1A-211ENST00000538363 RPL37AP8A6NKH3 93 aa6.79□□□□□ -1.32
TNFRSF1A-211ENST00000538363 COX6CP09669 75 aa6.79□□□□□ -1.32
TNFRSF1A-211ENST00000538363 VAMP3Q15836 100 aa6.79□□□□□ -1.32
TNFRSF1A-211ENST00000538363 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
TNFRSF1A-211ENST00000538363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-211ENST00000538363 A0A087WYN8 130 aa6.78□□□□□ -1.32
TNFRSF1A-211ENST00000538363 A0A1W2PNN7 141 aa6.78□□□□□ -1.32
TNFRSF1A-211ENST00000538363 C7orf33Q8WU49 177 aa6.78□□□□□ -1.32
TNFRSF1A-211ENST00000538363 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
TNFRSF1A-211ENST00000538363 IGKV2-28A0A075B6P5 120 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 SNCGO76070 127 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 IGKV2D-28P01615 120 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 LINC00167Q96N53 147 aa6.77□□□□□ -1.33
TNFRSF1A-211ENST00000538363 IGLV5-37A0A075B6J1 123 aa6.76□□□□□ -1.33
TNFRSF1A-211ENST00000538363 TRAV23DV6A0A075B6W5 121 aa6.76□□□□□ -1.33
TNFRSF1A-211ENST00000538363 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
TNFRSF1A-211ENST00000538363 Q8NDZ9 215 aa6.76□□□□□ -1.33
TNFRSF1A-211ENST00000538363 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
TNFRSF1A-211ENST00000538363 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
TNFRSF1A-211ENST00000538363 H3BUT2 72 aa6.75□□□□□ -1.33
TNFRSF1A-211ENST00000538363 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
TNFRSF1A-211ENST00000538363 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
TNFRSF1A-211ENST00000538363 FAT2Q9NYQ8 4349 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 C9orf118A6NHY6 69 aa6.74□□□□□ -1.33
TNFRSF1A-211ENST00000538363 PANO1I0J062 215 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms