RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LINC01556Q5JQF7 62 aa9.35□□□□□ -0.91
LIMK1-208ENST00000538333 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
LIMK1-208ENST00000538333 INAFM2P0DMQ5 153 aa9.34□□□□□ -0.91
LIMK1-208ENST00000538333 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
LIMK1-208ENST00000538333 A0A1B0GX51 115 aa9.34□□□□□ -0.91
LIMK1-208ENST00000538333 OBSCN-AS1Q96MR7 158 aa9.34□□□□□ -0.91
LIMK1-208ENST00000538333 SLPIP03973 132 aa9.33□□□□□ -0.92
LIMK1-208ENST00000538333 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
LIMK1-208ENST00000538333 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
LIMK1-208ENST00000538333 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
LIMK1-208ENST00000538333 ZNF561-AS1K7EIQ3 104 aa9.32□□□□□ -0.92
LIMK1-208ENST00000538333 PRB2P02812 416 aaPredicted RBP9.32□□□□□ -0.92
LIMK1-208ENST00000538333 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
LIMK1-208ENST00000538333 Q8N814 137 aa9.32□□□□□ -0.92
LIMK1-208ENST00000538333 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
LIMK1-208ENST00000538333 IGLV6-57P01721 117 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 S100A7L2Q5SY68 101 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 Q6Q795 121 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
LIMK1-208ENST00000538333 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
LIMK1-208ENST00000538333 GAGE2BQ13066 116 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
LIMK1-208ENST00000538333 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
LIMK1-208ENST00000538333 A0A1B0GV72 72 aa9.29□□□□□ -0.92
LIMK1-208ENST00000538333 K7EIL1 84 aa9.29□□□□□ -0.92
LIMK1-208ENST00000538333 DNAH10OSP0CZ25 163 aa9.29□□□□□ -0.92
LIMK1-208ENST00000538333 Q6ZRU5 148 aa9.29□□□□□ -0.92
LIMK1-208ENST00000538333 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
LIMK1-208ENST00000538333 TRAV10A0A0B4J240 114 aa9.28□□□□□ -0.92
LIMK1-208ENST00000538333 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
LIMK1-208ENST00000538333 LINC00575Q6W349 94 aa9.27□□□□□ -0.92
LIMK1-208ENST00000538333 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.93
LIMK1-208ENST00000538333 GAGE2AQ6NT46 116 aa9.27□□□□□ -0.93
LIMK1-208ENST00000538333 TRBV7-7A0A0K0K1E9 115 aa9.26□□□□□ -0.93
LIMK1-208ENST00000538333 TRBV10-3A0A0K0K1G6 114 aa9.26□□□□□ -0.93
LIMK1-208ENST00000538333 VPREB1P12018 145 aa9.25□□□□□ -0.93
LIMK1-208ENST00000538333 LINC00588Q9Y4M8 146 aa9.25□□□□□ -0.93
LIMK1-208ENST00000538333 NBEAL1Q6ZS30 2694 aa9.25□□□□□ -0.93
LIMK1-208ENST00000538333 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
LIMK1-208ENST00000538333 F8WDY8 70 aa9.24□□□□□ -0.93
LIMK1-208ENST00000538333 TMEM256-PLSCR3K7ERE1 68 aa9.24□□□□□ -0.93
LIMK1-208ENST00000538333 LINC00643Q86TS7 51 aa9.24□□□□□ -0.93
LIMK1-208ENST00000538333 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
LIMK1-208ENST00000538333 DNAH1Q9P2D7 4330 aa9.23□□□□□ -0.93
LIMK1-208ENST00000538333 TRAV23DV6A0A075B6W5 121 aa9.22□□□□□ -0.93
LIMK1-208ENST00000538333 hADV29S1A0JD25 119 aa9.22□□□□□ -0.93
LIMK1-208ENST00000538333 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
LIMK1-208ENST00000538333 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
LIMK1-208ENST00000538333 Q6ZRP5 223 aa9.22□□□□□ -0.93
LIMK1-208ENST00000538333 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
LIMK1-208ENST00000538333 MGAM2Q2M2H8 2515 aa9.21□□□□□ -0.94
LIMK1-208ENST00000538333 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
LIMK1-208ENST00000538333 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
LIMK1-208ENST00000538333 DIRC1Q969H9 104 aa9.2□□□□□ -0.94
LIMK1-208ENST00000538333 ANAPC13Q9BS18 74 aa9.2□□□□□ -0.94
LIMK1-208ENST00000538333 M0R378 163 aa9.19□□□□□ -0.94
LIMK1-208ENST00000538333 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
LIMK1-208ENST00000538333 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
LIMK1-208ENST00000538333 CCKP06307 115 aa9.18□□□□□ -0.94
LIMK1-208ENST00000538333 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
LIMK1-208ENST00000538333 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
LIMK1-208ENST00000538333 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
LIMK1-208ENST00000538333 Q6ZQY7 126 aa9.16□□□□□ -0.94
LIMK1-208ENST00000538333 UPK3BQ9BT76 320 aa9.16□□□□□ -0.94
LIMK1-208ENST00000538333 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
LIMK1-208ENST00000538333 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.94
LIMK1-208ENST00000538333 COX7BP24311 80 aa9.15□□□□□ -0.94
LIMK1-208ENST00000538333 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
LIMK1-208ENST00000538333 H3BQ85 93 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.12□□□□□ -0.95
LIMK1-208ENST00000538333 DNAH9Q9NYC9 4486 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 Q6JHZ5 121 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 RMI2Q96E14 147 aa9.12□□□□□ -0.95
LIMK1-208ENST00000538333 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
LIMK1-208ENST00000538333 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
LIMK1-208ENST00000538333 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
LIMK1-208ENST00000538333 Q6ZQT0 140 aa9.1□□□□□ -0.95
LIMK1-208ENST00000538333 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
LIMK1-208ENST00000538333 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
LIMK1-208ENST00000538333 PLA2G2DQ9UNK4 145 aa9.1□□□□□ -0.95
LIMK1-208ENST00000538333 KCNQ1DNQ9H478 68 aa9.09□□□□□ -0.95
LIMK1-208ENST00000538333 COL7A1Q02388 2944 aa9.09□□□□□ -0.95
LIMK1-208ENST00000538333 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
LIMK1-208ENST00000538333 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
LIMK1-208ENST00000538333 LYSTQ99698 3801 aa9.07□□□□□ -0.96
LIMK1-208ENST00000538333 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
LIMK1-208ENST00000538333 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
LIMK1-208ENST00000538333 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
LIMK1-208ENST00000538333 CCDC179H3BU77 68 aa9.06□□□□□ -0.96
LIMK1-208ENST00000538333 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
LIMK1-208ENST00000538333 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms