RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
LRP6-203ENST00000538239 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 EPM2AB3EWF7 344 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 CSNK1G2-AS1Q8NCQ2 148 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 C5orf42Q9H799 3197 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
LRP6-203ENST00000538239 CRYGAP11844 174 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 KRTAP1-1Q07627 177 aa3.63□□□□□ -1.83
LRP6-203ENST00000538239 LINC01546A6NGU7 62 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 IGKV2-30P06310 120 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 A0A087WVE0 104 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
LRP6-203ENST00000538239 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
LRP6-203ENST00000538239 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
LRP6-203ENST00000538239 H0Y9P7 68 aa3.61□□□□□ -1.83
LRP6-203ENST00000538239 ST20-AS1Q8NBB2 130 aa3.61□□□□□ -1.83
LRP6-203ENST00000538239 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
LRP6-203ENST00000538239 TLN2Q9Y4G6 2542 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 BCE1O60756 84 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 KLK9Q2XQG4 91 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 Q8NBF4 154 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 NDUFC1O43677 76 aa3.6□□□□□ -1.83
LRP6-203ENST00000538239 ELOF1P60002 83 aaKnown RBP3.59□□□□□ -1.83
LRP6-203ENST00000538239 IMUPQ9GZP8 106 aa3.59□□□□□ -1.83
LRP6-203ENST00000538239 Q6ZRX8 168 aa3.59□□□□□ -1.83
LRP6-203ENST00000538239 IGLV5-45A0A087WSX0 123 aa3.59□□□□□ -1.83
LRP6-203ENST00000538239 SOSTDC1Q6X4U4 206 aa3.59□□□□□ -1.84
LRP6-203ENST00000538239 C7orf65Q6ZTY9 151 aa3.59□□□□□ -1.84
LRP6-203ENST00000538239 PKD1L2Q7Z442 2459 aa3.59□□□□□ -1.84
LRP6-203ENST00000538239 LINC00476Q8WZB0 136 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 MYO9AB2RTY4 2548 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 SERTAD4-AS1Q5TG53 156 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 A6NED7 52 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 GIG44P09565 113 aaPredicted RBP3.58□□□□□ -1.84
LRP6-203ENST00000538239 CEP350Q5VT06 3117 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
LRP6-203ENST00000538239 USP9XQ93008 2570 aaPredicted RBP3.58□□□□□ -1.84
LRP6-203ENST00000538239 TRAV7A0A075B6U4 112 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 A0A087WTM6 91 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 COX7CP15954 63 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 Q96NJ1 140 aa3.58□□□□□ -1.84
LRP6-203ENST00000538239 LINC00313P59037 77 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 LINC00846Q9NV44 126 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 FAM218AQ96MZ4 157 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 APLNQ9ULZ1 77 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 V9GYY9 64 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 DOPEY1Q5JWR5 2465 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 POLQO75417 2590 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 SMIM29Q86T20 159 aa3.57□□□□□ -1.84
LRP6-203ENST00000538239 FAM240AA0A1B0GVK7 77 aa3.56□□□□□ -1.84
LRP6-203ENST00000538239 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
LRP6-203ENST00000538239 PCNTO95613 3336 aa3.56□□□□□ -1.84
LRP6-203ENST00000538239 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
LRP6-203ENST00000538239 C1orf64Q8NEQ6 169 aa3.56□□□□□ -1.84
LRP6-203ENST00000538239 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 LINC00336Q6ZUF6 198 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
LRP6-203ENST00000538239 TRBV7-7A0A0K0K1E9 115 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 VPREB1P12018 145 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 ACANP16112 2415 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 F8P00451 2351 aa3.55□□□□□ -1.84
LRP6-203ENST00000538239 IGLV1-50A0A075B6I6 118 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 A0A0U1RQV1 116 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 C9orf92A6NGG3 77 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 CASC10Q5T4H9 136 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 LINC00304Q8N9R0 145 aa3.54□□□□□ -1.84
LRP6-203ENST00000538239 CXCL6P80162 114 aa3.53□□□□□ -1.84
LRP6-203ENST00000538239 ANAPC11Q9NYG5 84 aa3.53□□□□□ -1.84
LRP6-203ENST00000538239 CHD7Q9P2D1 2997 aa3.53□□□□□ -1.84
LRP6-203ENST00000538239 MUC4Q99102 2169 aa3.53□□□□□ -1.84
LRP6-203ENST00000538239 USP9YO00507 2555 aaPredicted RBP3.53□□□□□ -1.84
LRP6-203ENST00000538239 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
LRP6-203ENST00000538239 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 LINC00528Q8N1L1 170 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 Q6ZQT0 140 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 CDIP1Q9H305 208 aa3.52□□□□□ -1.85
LRP6-203ENST00000538239 SETD2Q9BYW2 2564 aaPredicted RBP3.52□□□□□ -1.85
LRP6-203ENST00000538239 ZNF861PO60384 105 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 MTORP42345 2549 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 TMEM254Q8TBM7 123 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 A0A1W2PNN7 141 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 MKI67P46013 3256 aaKnown RBP3.51□□□□□ -1.85
LRP6-203ENST00000538239 DSCR10P59022 87 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 TNP2Q05952 138 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 TP53AIP1Q9HCN2 124 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 HTTP42858 3142 aa3.51□□□□□ -1.85
LRP6-203ENST00000538239 ZNF575Q86XF7 245 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 CR1P17927 2039 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 C9orf163Q8N9P6 203 aa3.5□□□□□ -1.85
LRP6-203ENST00000538239 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms